RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 KAZALD1Q96I82 304 aa17.64■□□□□ 0.41
LINC00887-204ENST00000456816 IFIT5Q13325 482 aaKnown RBP17.63■□□□□ 0.41
LINC00887-204ENST00000456816 CCDC57Q2TAC2 916 aa17.63■□□□□ 0.41
LINC00887-204ENST00000456816 FAM161AQ3B820 660 aa17.63■□□□□ 0.41
LINC00887-204ENST00000456816 ZNF622Q969S3 477 aaKnown RBP eCLIP17.63■□□□□ 0.41
LINC00887-204ENST00000456816 RBM17Q96I25 401 aaKnown RBP17.63■□□□□ 0.41
LINC00887-204ENST00000456816 GREM2Q9H772 168 aa17.63■□□□□ 0.41
LINC00887-204ENST00000456816 PDZRN3Q9UPQ7 1066 aa17.63■□□□□ 0.41
LINC00887-204ENST00000456816 TNRC6CQ9HCJ0 1690 aaKnown RBP17.63■□□□□ 0.41
LINC00887-204ENST00000456816 DDX60Q8IY21 1712 aaKnown RBP17.63■□□□□ 0.41
LINC00887-204ENST00000456816 LAMB2P55268 1798 aa17.63■□□□□ 0.41
LINC00887-204ENST00000456816 ANKRD18BA2A2Z9 1011 aa17.62■□□□□ 0.41
LINC00887-204ENST00000456816 SRGAP3O43295 1099 aa17.62■□□□□ 0.41
LINC00887-204ENST00000456816 NPR1P16066 1061 aa17.62■□□□□ 0.41
LINC00887-204ENST00000456816 CHRNA5P30532 468 aa17.62■□□□□ 0.41
LINC00887-204ENST00000456816 SF3B3Q15393 1217 aaKnown RBP17.62■□□□□ 0.41
LINC00887-204ENST00000456816 CD2APQ9Y5K6 639 aa17.62■□□□□ 0.41
LINC00887-204ENST00000456816 HMMRO75330 724 aa17.61■□□□□ 0.41
LINC00887-204ENST00000456816 CSF1RP07333 972 aa17.61■□□□□ 0.41
LINC00887-204ENST00000456816 ITGA6P23229 1130 aa17.61■□□□□ 0.41
LINC00887-204ENST00000456816 RABL6Q3YEC7 729 aaPredicted RBP17.61■□□□□ 0.41
LINC00887-204ENST00000456816 CEP85Q6P2H3 762 aa17.61■□□□□ 0.41
LINC00887-204ENST00000456816 RPAP2Q8IXW5 612 aaPredicted RBP17.61■□□□□ 0.41
LINC00887-204ENST00000456816 CDC5LQ99459 802 aaKnown RBP17.61■□□□□ 0.41
LINC00887-204ENST00000456816 A0A0G2JLW4 131 aa17.6■□□□□ 0.41
LINC00887-204ENST00000456816 SRGNP10124 158 aa17.6■□□□□ 0.41
LINC00887-204ENST00000456816 TGFB2P61812 414 aa17.6■□□□□ 0.41
LINC00887-204ENST00000456816 ATP8B2P98198 1209 aa17.6■□□□□ 0.41
LINC00887-204ENST00000456816 CRY2Q49AN0 593 aa17.6■□□□□ 0.41
LINC00887-204ENST00000456816 MASTLQ96GX5 879 aa17.6■□□□□ 0.41
LINC00887-204ENST00000456816 SEC31BQ9NQW1 1179 aa17.6■□□□□ 0.41
LINC00887-204ENST00000456816 SRCAPQ6ZRS2 3230 aa17.59■□□□□ 0.41
LINC00887-204ENST00000456816 KLRG2A4D1S0 409 aaPredicted RBP17.59■□□□□ 0.41
LINC00887-204ENST00000456816 DPEP1P16444 411 aa17.59■□□□□ 0.41
LINC00887-204ENST00000456816 IGHMBP2P38935 993 aaKnown RBP17.59■□□□□ 0.41
LINC00887-204ENST00000456816 FHDC1Q9C0D6 1143 aaPredicted RBP17.59■□□□□ 0.41
LINC00887-204ENST00000456816 ANKRD31Q8N7Z5 1873 aa17.58■□□□□ 0.41
LINC00887-204ENST00000456816 RTL9Q8NET4 1388 aa17.58■□□□□ 0.4
LINC00887-204ENST00000456816 PNMA6EA0A0J9YXQ4 647 aa17.58■□□□□ 0.4
LINC00887-204ENST00000456816 MTX1Q13505 466 aa17.58■□□□□ 0.4
LINC00887-204ENST00000456816 STYK1Q6J9G0 422 aa17.58■□□□□ 0.4
LINC00887-204ENST00000456816 ANKRD18AQ8IVF6 992 aa17.58■□□□□ 0.4
LINC00887-204ENST00000456816 PCDHB15Q9Y5E8 787 aa17.58■□□□□ 0.4
LINC00887-204ENST00000456816 ALDH1B1P30837 517 aa17.57■□□□□ 0.4
LINC00887-204ENST00000456816 GRAPQ13588 217 aa17.57■□□□□ 0.4
LINC00887-204ENST00000456816 GRAPLQ8TC17 118 aaPredicted RBP17.57■□□□□ 0.4
LINC00887-204ENST00000456816 CNKSR1Q969H4 720 aa17.57■□□□□ 0.4
LINC00887-204ENST00000456816 CRAMP1Q96RY5 1269 aa17.57■□□□□ 0.4
LINC00887-204ENST00000456816 MPHOSPH8Q99549 860 aa17.57■□□□□ 0.4
LINC00887-204ENST00000456816 MYH3P11055 1940 aa17.57■□□□□ 0.4
LINC00887-204ENST00000456816 HOXA10P31260 410 aaPredicted RBP17.56■□□□□ 0.4
LINC00887-204ENST00000456816 OS9Q13438 667 aaPredicted RBP17.56■□□□□ 0.4
LINC00887-204ENST00000456816 NLGN2Q8NFZ4 835 aa17.56■□□□□ 0.4
LINC00887-204ENST00000456816 ZNF594Q96JF6 807 aaPredicted RBP17.56■□□□□ 0.4
LINC00887-204ENST00000456816 SIL1Q9H173 461 aa17.56■□□□□ 0.4
LINC00887-204ENST00000456816 TMX4Q9H1E5 349 aaPredicted RBP17.56■□□□□ 0.4
LINC00887-204ENST00000456816 WWC3Q9ULE0 1092 aa17.56■□□□□ 0.4
LINC00887-204ENST00000456816 PPEF1O14829 653 aaPredicted RBP17.55■□□□□ 0.4
LINC00887-204ENST00000456816 RPS8P62241 208 aaKnown RBP17.55■□□□□ 0.4
LINC00887-204ENST00000456816 POLA2Q14181 598 aa17.55■□□□□ 0.4
LINC00887-204ENST00000456816 ERICH6BQ5W0A0 696 aa17.55■□□□□ 0.4
LINC00887-204ENST00000456816 TTLL6Q8N841 843 aa17.55■□□□□ 0.4
LINC00887-204ENST00000456816 KLHDC4Q8TBB5 520 aa17.55■□□□□ 0.4
LINC00887-204ENST00000456816 SSH3Q8TE77 659 aa17.55■□□□□ 0.4
LINC00887-204ENST00000456816 CELF1Q92879 486 aaKnown RBP17.55■□□□□ 0.4
LINC00887-204ENST00000456816 RWDD1Q9H446 243 aaPredicted RBP17.55■□□□□ 0.4
LINC00887-204ENST00000456816 CNNM1Q9NRU3 951 aa17.55■□□□□ 0.4
LINC00887-204ENST00000456816 PIM2Q9P1W9 311 aa17.55■□□□□ 0.4
LINC00887-204ENST00000456816 PA2G4Q9UQ80 394 aaKnown RBP17.55■□□□□ 0.4
LINC00887-204ENST00000456816 COL11A2P13942 1736 aaPredicted RBP17.55■□□□□ 0.4
LINC00887-204ENST00000456816 KIF13BQ9NQT8 1826 aa17.54■□□□□ 0.4
LINC00887-204ENST00000456816 PRPF40BQ6NWY9 871 aaKnown RBP17.54■□□□□ 0.4
LINC00887-204ENST00000456816 LDHAL6AQ6ZMR3 332 aa17.54■□□□□ 0.4
LINC00887-204ENST00000456816 SIRT2Q8IXJ6 389 aa17.54■□□□□ 0.4
LINC00887-204ENST00000456816 ZNF219Q9P2Y4 722 aaPredicted RBP17.54■□□□□ 0.4
LINC00887-204ENST00000456816 SURF6O75683 361 aaKnown RBP17.53■□□□□ 0.4
LINC00887-204ENST00000456816 BBOX1O75936 387 aa17.53■□□□□ 0.4
LINC00887-204ENST00000456816 RFX5P48382 616 aaPredicted RBP17.53■□□□□ 0.4
LINC00887-204ENST00000456816 PTPN12Q05209 780 aaKnown RBP17.53■□□□□ 0.4
LINC00887-204ENST00000456816 G3BP1Q13283 466 aaKnown RBP eCLIP17.53■□□□□ 0.4
LINC00887-204ENST00000456816 SYT17Q9BSW7 474 aa17.53■□□□□ 0.4
LINC00887-204ENST00000456816 DALRD3Q5D0E6 543 aaKnown RBP17.52■□□□□ 0.4
LINC00887-204ENST00000456816 TMC4Q7Z404 712 aa17.52■□□□□ 0.4
LINC00887-204ENST00000456816 CCDC136Q96JN2 1154 aa17.52■□□□□ 0.4
LINC00887-204ENST00000456816 APBB1O00213 710 aa17.51■□□□□ 0.39
LINC00887-204ENST00000456816 KCNA3P22001 575 aa17.51■□□□□ 0.39
LINC00887-204ENST00000456816 HSP90AB4PQ58FF6 505 aa17.51■□□□□ 0.39
LINC00887-204ENST00000456816 PELP1Q8IZL8 1130 aaKnown RBP17.51■□□□□ 0.39
LINC00887-204ENST00000456816 COPRSQ9NQ92 184 aa17.51■□□□□ 0.39
LINC00887-204ENST00000456816 BSDC1Q9NW68 430 aaPredicted RBP17.51■□□□□ 0.39
LINC00887-204ENST00000456816 BCS1LQ9Y276 419 aa17.51■□□□□ 0.39
LINC00887-204ENST00000456816 EXOC6BQ9Y2D4 811 aa17.51■□□□□ 0.39
LINC00887-204ENST00000456816 EYA2O00167 538 aa17.5■□□□□ 0.39
LINC00887-204ENST00000456816 HDAC1Q13547 482 aaPredicted RBP17.5■□□□□ 0.39
LINC00887-204ENST00000456816 LRRC24Q50LG9 513 aa17.5■□□□□ 0.39
LINC00887-204ENST00000456816 METTL24Q5JXM2 366 aa17.5■□□□□ 0.39
LINC00887-204ENST00000456816 PUS3Q9BZE2 481 aaKnown RBP17.5■□□□□ 0.39
LINC00887-204ENST00000456816 BCL11AQ9H165 835 aa17.5■□□□□ 0.39
LINC00887-204ENST00000456816 CIAO1O76071 339 aa17.49■□□□□ 0.39
LINC00887-204ENST00000456816 PPP4R2Q9NY27 417 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms