RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 SH3TC1Q8TE82 1336 aa9.17□□□□□ -0.94
ERCC3-204ENST00000456257 IFIT2P09913 472 aaKnown RBP9.17□□□□□ -0.94
ERCC3-204ENST00000456257 GPTP24298 496 aa9.17□□□□□ -0.94
ERCC3-204ENST00000456257 TFCP2Q12800 502 aa9.17□□□□□ -0.94
ERCC3-204ENST00000456257 FAM182BQ5T319 152 aa9.17□□□□□ -0.94
ERCC3-204ENST00000456257 KLHDC4Q8TBB5 520 aa9.17□□□□□ -0.94
ERCC3-204ENST00000456257 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.17□□□□□ -0.94
ERCC3-204ENST00000456257 ARHGEF1Q92888 912 aaKnown RBP9.17□□□□□ -0.94
ERCC3-204ENST00000456257 DDRGK1Q96HY6 314 aa9.17□□□□□ -0.94
ERCC3-204ENST00000456257 ZNF512BQ96KM6 892 aaPredicted RBP9.17□□□□□ -0.94
ERCC3-204ENST00000456257 C22orf23Q9BZE7 217 aa9.17□□□□□ -0.94
ERCC3-204ENST00000456257 RTCBQ9Y3I0 505 aaKnown RBP9.17□□□□□ -0.94
ERCC3-204ENST00000456257 BTAF1O14981 1849 aa9.17□□□□□ -0.94
ERCC3-204ENST00000456257 NUP98P52948 1817 aa9.17□□□□□ -0.94
ERCC3-204ENST00000456257 A0A0G2JS52 829 aa9.16□□□□□ -0.94
ERCC3-204ENST00000456257 RXRBP28702 533 aa9.16□□□□□ -0.94
ERCC3-204ENST00000456257 MYT1Q01538 1121 aa9.16□□□□□ -0.94
ERCC3-204ENST00000456257 IFIT5Q13325 482 aaKnown RBP9.16□□□□□ -0.94
ERCC3-204ENST00000456257 OS9Q13438 667 aaPredicted RBP9.16□□□□□ -0.94
ERCC3-204ENST00000456257 CCDC57Q2TAC2 916 aa9.16□□□□□ -0.94
ERCC3-204ENST00000456257 AACSQ86V21 672 aa9.16□□□□□ -0.94
ERCC3-204ENST00000456257 VGLL2Q8N8G2 317 aa9.16□□□□□ -0.94
ERCC3-204ENST00000456257 EVI5LQ96CN4 794 aa9.16□□□□□ -0.94
ERCC3-204ENST00000456257 GPATCH3Q96I76 525 aa9.16□□□□□ -0.94
ERCC3-204ENST00000456257 ESYT1Q9BSJ8 1104 aa9.16□□□□□ -0.94
ERCC3-204ENST00000456257 DBNLQ9UJU6 430 aaKnown RBP9.16□□□□□ -0.94
ERCC3-204ENST00000456257 NIP7Q9Y221 180 aaKnown RBP eCLIP9.16□□□□□ -0.94
ERCC3-204ENST00000456257 AKAP2Q9Y2D5 859 aa9.16□□□□□ -0.94
ERCC3-204ENST00000456257 TM4SF1P30408 202 aa9.15□□□□□ -0.94
ERCC3-204ENST00000456257 KCNQ4P56696 695 aa9.15□□□□□ -0.94
ERCC3-204ENST00000456257 LRRC24Q50LG9 513 aa9.15□□□□□ -0.94
ERCC3-204ENST00000456257 AMIGO3Q86WK7 504 aa9.15□□□□□ -0.94
ERCC3-204ENST00000456257 SNX21Q969T3 373 aa9.15□□□□□ -0.94
ERCC3-204ENST00000456257 PUS3Q9BZE2 481 aaKnown RBP9.15□□□□□ -0.94
ERCC3-204ENST00000456257 GREM2Q9H772 168 aa9.15□□□□□ -0.94
ERCC3-204ENST00000456257 CEP126Q9P2H0 1117 aa9.15□□□□□ -0.94
ERCC3-204ENST00000456257 AFDNP55196 1824 aaKnown RBP9.15□□□□□ -0.95
ERCC3-204ENST00000456257 TUBGCP6Q96RT7 1819 aa9.15□□□□□ -0.95
ERCC3-204ENST00000456257 ANKRD36CQ5JPF3 1778 aa9.14□□□□□ -0.95
ERCC3-204ENST00000456257 ANKRD18BA2A2Z9 1011 aa9.14□□□□□ -0.95
ERCC3-204ENST00000456257 SGSM2O43147 1006 aa9.14□□□□□ -0.95
ERCC3-204ENST00000456257 REC8O95072 547 aa9.14□□□□□ -0.95
ERCC3-204ENST00000456257 FGFR2P21802 821 aa9.14□□□□□ -0.95
ERCC3-204ENST00000456257 ITGA6P23229 1130 aa9.14□□□□□ -0.95
ERCC3-204ENST00000456257 SSFA2P28290 1259 aa9.14□□□□□ -0.95
ERCC3-204ENST00000456257 TRAPPC3LQ5T215 181 aa9.14□□□□□ -0.95
ERCC3-204ENST00000456257 CASC1Q6TDU7 716 aa9.14□□□□□ -0.95
ERCC3-204ENST00000456257 KCNB2Q92953 911 aa9.14□□□□□ -0.95
ERCC3-204ENST00000456257 HAUS7Q99871 368 aa9.14□□□□□ -0.95
ERCC3-204ENST00000456257 NYXQ9GZU5 481 aa9.14□□□□□ -0.95
ERCC3-204ENST00000456257 CCDC8Q9H0W5 538 aaPredicted RBP9.14□□□□□ -0.95
ERCC3-204ENST00000456257 SIL1Q9H173 461 aa9.14□□□□□ -0.95
ERCC3-204ENST00000456257 ZNF330Q9Y3S2 320 aaPredicted RBP9.14□□□□□ -0.95
ERCC3-204ENST00000456257 GNPATO15228 680 aa9.13□□□□□ -0.95
ERCC3-204ENST00000456257 TRIM37O94972 964 aa9.13□□□□□ -0.95
ERCC3-204ENST00000456257 TIMM10P62072 90 aa9.13□□□□□ -0.95
ERCC3-204ENST00000456257 RTL5Q5HYW3 569 aaPredicted RBP9.13□□□□□ -0.95
ERCC3-204ENST00000456257 USPL1Q5W0Q7 1092 aa9.13□□□□□ -0.95
ERCC3-204ENST00000456257 TSHZ3Q63HK5 1081 aa9.13□□□□□ -0.95
ERCC3-204ENST00000456257 TBC1D9BQ66K14 1250 aa9.13□□□□□ -0.95
ERCC3-204ENST00000456257 LDHAL6AQ6ZMR3 332 aa9.13□□□□□ -0.95
ERCC3-204ENST00000456257 CNTROBQ8N137 903 aa9.13□□□□□ -0.95
ERCC3-204ENST00000456257 AKT1S1Q96B36 256 aa9.13□□□□□ -0.95
ERCC3-204ENST00000456257 ZNF594Q96JF6 807 aaPredicted RBP9.13□□□□□ -0.95
ERCC3-204ENST00000456257 DBNDD2Q9BQY9 259 aa9.13□□□□□ -0.95
ERCC3-204ENST00000456257 TLR7Q9NYK1 1049 aaKnown RBP9.13□□□□□ -0.95
ERCC3-204ENST00000456257 RFX7Q2KHR2 1363 aa9.12□□□□□ -0.95
ERCC3-204ENST00000456257 ABCC12Q96J65 1359 aa9.12□□□□□ -0.95
ERCC3-204ENST00000456257 MROH5Q6ZUA9 1318 aa9.12□□□□□ -0.95
ERCC3-204ENST00000456257 KLRG2A4D1S0 409 aaPredicted RBP9.12□□□□□ -0.95
ERCC3-204ENST00000456257 HIP1O00291 1037 aa9.12□□□□□ -0.95
ERCC3-204ENST00000456257 ZPR1O75312 459 aa9.12□□□□□ -0.95
ERCC3-204ENST00000456257 NPM3O75607 178 aaKnown RBP9.12□□□□□ -0.95
ERCC3-204ENST00000456257 PDE8BO95263 885 aa9.12□□□□□ -0.95
ERCC3-204ENST00000456257 HCLS1P14317 486 aaPredicted RBP9.12□□□□□ -0.95
ERCC3-204ENST00000456257 MFAP1P55081 439 aaKnown RBP9.12□□□□□ -0.95
ERCC3-204ENST00000456257 ANAPC15P60006 121 aa9.12□□□□□ -0.95
ERCC3-204ENST00000456257 TXNRD1Q16881 649 aa9.12□□□□□ -0.95
ERCC3-204ENST00000456257 CCDC152Q4G0S7 254 aa9.12□□□□□ -0.95
ERCC3-204ENST00000456257 POTEAQ6S8J7 498 aa9.12□□□□□ -0.95
ERCC3-204ENST00000456257 TPTE2Q6XPS3 522 aa9.12□□□□□ -0.95
ERCC3-204ENST00000456257 ARXQ96QS3 562 aa9.12□□□□□ -0.95
ERCC3-204ENST00000456257 SETDB2Q96T68 719 aa9.12□□□□□ -0.95
ERCC3-204ENST00000456257 RIC1Q4ADV7 1423 aa9.12□□□□□ -0.95
ERCC3-204ENST00000456257 TAF1LQ8IZX4 1826 aa9.12□□□□□ -0.95
ERCC3-204ENST00000456257 BCORQ6W2J9 1755 aa9.12□□□□□ -0.95
ERCC3-204ENST00000456257 BRWD3Q6RI45 1802 aa9.11□□□□□ -0.95
ERCC3-204ENST00000456257 A0A1B0GUL7 405 aa9.11□□□□□ -0.95
ERCC3-204ENST00000456257 RFC4P35249 363 aa9.11□□□□□ -0.95
ERCC3-204ENST00000456257 ERFEQ4G0M1 354 aa9.11□□□□□ -0.95
ERCC3-204ENST00000456257 RUFY2Q8WXA3 655 aa9.11□□□□□ -0.95
ERCC3-204ENST00000456257 BSDC1Q9NW68 430 aaPredicted RBP9.11□□□□□ -0.95
ERCC3-204ENST00000456257 SRP68Q9UHB9 627 aaKnown RBP9.11□□□□□ -0.95
ERCC3-204ENST00000456257 C4BP0C0L5 1744 aa9.11□□□□□ -0.95
ERCC3-204ENST00000456257 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.1□□□□□ -0.95
ERCC3-204ENST00000456257 TRIM6-TRIM34B2RNG4 842 aa9.1□□□□□ -0.95
ERCC3-204ENST00000456257 GYS1P13807 737 aa9.1□□□□□ -0.95
ERCC3-204ENST00000456257 NFIXQ14938 502 aa9.1□□□□□ -0.95
ERCC3-204ENST00000456257 TSGA10IPQ3SY00 556 aa9.1□□□□□ -0.95
ERCC3-204ENST00000456257 KBTBD3Q8NAB2 608 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms