RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 NLRP6P59044 892 aa22.3■■□□□ 1.16
SEMA3B-208ENST00000456210 NAA30Q147X3 362 aaPredicted RBP22.3■■□□□ 1.16
SEMA3B-208ENST00000456210 DDX17Q92841 729 aaKnown RBP22.3■■□□□ 1.16
SEMA3B-208ENST00000456210 PHF8Q9UPP1 1060 aa22.3■■□□□ 1.16
SEMA3B-208ENST00000456210 MST1RQ04912 1400 aa22.29■■□□□ 1.16
SEMA3B-208ENST00000456210 SLC27A2O14975 620 aa22.29■■□□□ 1.16
SEMA3B-208ENST00000456210 KRT222Q8N1A0 295 aa22.29■■□□□ 1.16
SEMA3B-208ENST00000456210 CERKQ8TCT0 537 aa22.29■■□□□ 1.16
SEMA3B-208ENST00000456210 PGBD1Q96JS3 809 aa22.29■■□□□ 1.16
SEMA3B-208ENST00000456210 KCND1Q9NSA2 647 aa22.29■■□□□ 1.16
SEMA3B-208ENST00000456210 IQCB1Q15051 598 aa22.29■■□□□ 1.16
SEMA3B-208ENST00000456210 SLFNL1Q499Z3 407 aa22.29■■□□□ 1.16
SEMA3B-208ENST00000456210 LARP1Q6PKG0 1096 aaKnown RBP22.29■■□□□ 1.16
SEMA3B-208ENST00000456210 SLAIN2Q9P270 581 aa22.29■■□□□ 1.16
SEMA3B-208ENST00000456210 JCADQ9P266 1359 aa22.28■■□□□ 1.16
SEMA3B-208ENST00000456210 A0A0U1RQG5 324 aaPredicted RBP22.28■■□□□ 1.16
SEMA3B-208ENST00000456210 ERC1Q8IUD2 1116 aa22.28■■□□□ 1.16
SEMA3B-208ENST00000456210 DNAAF4Q8WXU2 420 aa22.28■■□□□ 1.16
SEMA3B-208ENST00000456210 C1orf167Q5SNV9 1468 aa22.28■■□□□ 1.16
SEMA3B-208ENST00000456210 HOXB7P09629 217 aa22.27■■□□□ 1.16
SEMA3B-208ENST00000456210 RPS6KB1P23443 525 aa22.27■■□□□ 1.16
SEMA3B-208ENST00000456210 OS9Q13438 667 aaPredicted RBP22.27■■□□□ 1.16
SEMA3B-208ENST00000456210 BLOC1S2Q6QNY1 142 aa22.27■■□□□ 1.16
SEMA3B-208ENST00000456210 AMPHP49418 695 aa22.27■■□□□ 1.16
SEMA3B-208ENST00000456210 TERF2Q15554 542 aa22.27■■□□□ 1.16
SEMA3B-208ENST00000456210 TFIP11Q9UBB9 837 aaKnown RBP22.27■■□□□ 1.16
SEMA3B-208ENST00000456210 FAM193AP78312 1265 aa22.26■■□□□ 1.15
SEMA3B-208ENST00000456210 TOB2Q14106 344 aaPredicted RBP22.26■■□□□ 1.15
SEMA3B-208ENST00000456210 KMT5BQ4FZB7 885 aa22.26■■□□□ 1.15
SEMA3B-208ENST00000456210 RNF20Q5VTR2 975 aa22.26■■□□□ 1.15
SEMA3B-208ENST00000456210 ABTB2Q8N961 1025 aa22.26■■□□□ 1.15
SEMA3B-208ENST00000456210 BICD2Q8TD16 824 aa22.26■■□□□ 1.15
SEMA3B-208ENST00000456210 DDX54Q8TDD1 881 aaKnown RBP22.26■■□□□ 1.15
SEMA3B-208ENST00000456210 ERO1AQ96HE7 468 aa22.26■■□□□ 1.15
SEMA3B-208ENST00000456210 KCNJ4P48050 445 aa22.26■■□□□ 1.15
SEMA3B-208ENST00000456210 ADCY9O60503 1353 aa22.26■■□□□ 1.15
SEMA3B-208ENST00000456210 MED23Q9ULK4 1368 aa22.26■■□□□ 1.15
SEMA3B-208ENST00000456210 DCCP43146 1447 aa22.26■■□□□ 1.15
SEMA3B-208ENST00000456210 MARF1Q9Y4F3 1742 aaKnown RBP22.25■■□□□ 1.15
SEMA3B-208ENST00000456210 IFIT2P09913 472 aaKnown RBP22.25■■□□□ 1.15
SEMA3B-208ENST00000456210 PIP4K2BP78356 416 aa22.25■■□□□ 1.15
SEMA3B-208ENST00000456210 RESTQ13127 1097 aa22.25■■□□□ 1.15
SEMA3B-208ENST00000456210 PTPN14Q15678 1187 aa22.25■■□□□ 1.15
SEMA3B-208ENST00000456210 TSGA10IPQ3SY00 556 aa22.25■■□□□ 1.15
SEMA3B-208ENST00000456210 CHMP4AQ9BY43 222 aa22.25■■□□□ 1.15
SEMA3B-208ENST00000456210 CEMIPQ8WUJ3 1361 aa22.24■■□□□ 1.15
SEMA3B-208ENST00000456210 GOLGA6L19H0YKK7 550 aa22.24■■□□□ 1.15
SEMA3B-208ENST00000456210 NMIQ13287 307 aaPredicted RBP22.24■■□□□ 1.15
SEMA3B-208ENST00000456210 ZNF215Q9UL58 517 aaPredicted RBP22.24■■□□□ 1.15
SEMA3B-208ENST00000456210 CTAGE5O15320 804 aa22.24■■□□□ 1.15
SEMA3B-208ENST00000456210 COL9A3Q14050 684 aaPredicted RBP22.24■■□□□ 1.15
SEMA3B-208ENST00000456210 FAM227BQ96M60 508 aa22.24■■□□□ 1.15
SEMA3B-208ENST00000456210 HMG20BQ9P0W2 317 aa22.24■■□□□ 1.15
SEMA3B-208ENST00000456210 USP27XA6NNY8 438 aa22.23■■□□□ 1.15
SEMA3B-208ENST00000456210 STX1AQ16623 288 aa22.23■■□□□ 1.15
SEMA3B-208ENST00000456210 PI4KAP2A4QPH2 592 aa22.22■■□□□ 1.15
SEMA3B-208ENST00000456210 UBAP1LF5GYI3 381 aa22.22■■□□□ 1.15
SEMA3B-208ENST00000456210 CCZ1BP86790 482 aa22.22■■□□□ 1.15
SEMA3B-208ENST00000456210 CCZ1P86791 482 aaPredicted RBP22.22■■□□□ 1.15
SEMA3B-208ENST00000456210 CREBRFQ8IUR6 639 aa22.22■■□□□ 1.15
SEMA3B-208ENST00000456210 PI4KAP1Q8N8J0 262 aa22.22■■□□□ 1.15
SEMA3B-208ENST00000456210 ZNF592Q92610 1267 aa22.22■■□□□ 1.15
SEMA3B-208ENST00000456210 KIF2AO00139 706 aaPredicted RBP22.22■■□□□ 1.15
SEMA3B-208ENST00000456210 SKILP12757 684 aa22.22■■□□□ 1.15
SEMA3B-208ENST00000456210 BRINP3Q76B58 766 aa22.22■■□□□ 1.15
SEMA3B-208ENST00000456210 ZSCAN16Q9H4T2 348 aaPredicted RBP22.22■■□□□ 1.15
SEMA3B-208ENST00000456210 ERBB3P21860 1342 aa22.21■■□□□ 1.15
SEMA3B-208ENST00000456210 CCDC66A2RUB6 948 aa22.21■■□□□ 1.15
SEMA3B-208ENST00000456210 NUTM2GQ5VZR2 741 aa22.21■■□□□ 1.15
SEMA3B-208ENST00000456210 C11orf57Q6ZUT1 292 aaPredicted RBP22.21■■□□□ 1.15
SEMA3B-208ENST00000456210 CFAP45Q9UL16 551 aa22.21■■□□□ 1.15
SEMA3B-208ENST00000456210 CCAR2Q8N163 923 aaKnown RBP22.21■■□□□ 1.15
SEMA3B-208ENST00000456210 GTF3C6Q969F1 213 aa22.21■■□□□ 1.15
SEMA3B-208ENST00000456210 CHPF2Q9P2E5 772 aa22.21■■□□□ 1.15
SEMA3B-208ENST00000456210 EIF4A1P60842 406 aaKnown RBP22.2■■□□□ 1.14
SEMA3B-208ENST00000456210 FBXO38Q6PIJ6 1188 aa22.2■■□□□ 1.14
SEMA3B-208ENST00000456210 AACSQ86V21 672 aa22.2■■□□□ 1.14
SEMA3B-208ENST00000456210 CCDC69A6NI79 296 aa22.19■■□□□ 1.14
SEMA3B-208ENST00000456210 ARID5BQ14865 1188 aa22.19■■□□□ 1.14
SEMA3B-208ENST00000456210 A0A0D9SFI3 127 aa22.19■■□□□ 1.14
SEMA3B-208ENST00000456210 SLU7O95391 586 aaKnown RBP22.19■■□□□ 1.14
SEMA3B-208ENST00000456210 PSME1Q06323 249 aa22.19■■□□□ 1.14
SEMA3B-208ENST00000456210 TCEANC2Q96MN5 208 aa22.19■■□□□ 1.14
SEMA3B-208ENST00000456210 HDAC5Q9UQL6 1122 aa22.19■■□□□ 1.14
SEMA3B-208ENST00000456210 ALDH1L1O75891 902 aa22.18■■□□□ 1.14
SEMA3B-208ENST00000456210 HOXC9P31274 260 aa22.18■■□□□ 1.14
SEMA3B-208ENST00000456210 EIF2S2P20042 333 aaKnown RBP22.18■■□□□ 1.14
SEMA3B-208ENST00000456210 BRF1Q92994 677 aa22.18■■□□□ 1.14
SEMA3B-208ENST00000456210 TAF6LQ9Y6J9 622 aa22.18■■□□□ 1.14
SEMA3B-208ENST00000456210 MRC1P22897 1456 aa22.17■■□□□ 1.14
SEMA3B-208ENST00000456210 GSDMDP57764 484 aa22.17■■□□□ 1.14
SEMA3B-208ENST00000456210 KRT32Q14532 448 aa22.17■■□□□ 1.14
SEMA3B-208ENST00000456210 ELF2Q15723 593 aa22.17■■□□□ 1.14
SEMA3B-208ENST00000456210 USPL1Q5W0Q7 1092 aa22.17■■□□□ 1.14
SEMA3B-208ENST00000456210 DHX40Q8IX18 779 aaKnown RBP22.17■■□□□ 1.14
SEMA3B-208ENST00000456210 ROBO1Q9Y6N7 1651 aa22.17■■□□□ 1.14
SEMA3B-208ENST00000456210 JAK2O60674 1132 aa22.16■■□□□ 1.14
SEMA3B-208ENST00000456210 FGD1P98174 961 aa22.16■■□□□ 1.14
SEMA3B-208ENST00000456210 LMO7Q8WWI1 1683 aa22.16■■□□□ 1.14
SEMA3B-208ENST00000456210 TOM1O60784 492 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms