RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 KIAA2012Q0VF49 1180 aa30.69■■■□□ 2.5
PTPRA-208ENST00000455631 DGKZQ13574 1117 aa30.69■■■□□ 2.5
PTPRA-208ENST00000455631 MPNDQ8N594 471 aa30.69■■■□□ 2.5
PTPRA-208ENST00000455631 TRPM4Q8TD43 1214 aa30.69■■■□□ 2.5
PTPRA-208ENST00000455631 ZC3H15Q8WU90 426 aaKnown RBP30.69■■■□□ 2.5
PTPRA-208ENST00000455631 HIRAP54198 1017 aaPredicted RBP30.68■■■□□ 2.5
PTPRA-208ENST00000455631 TNIP1Q15025 636 aa30.68■■■□□ 2.5
PTPRA-208ENST00000455631 SLC10A5Q5PT55 438 aa30.68■■■□□ 2.5
PTPRA-208ENST00000455631 CDC37L1Q7L3B6 337 aa30.68■■■□□ 2.5
PTPRA-208ENST00000455631 ANKRD36CQ5JPF3 1778 aa30.68■■■□□ 2.5
PTPRA-208ENST00000455631 BBOX1O75936 387 aa30.66■■■□□ 2.5
PTPRA-208ENST00000455631 SP8Q8IXZ3 490 aa30.66■■■□□ 2.5
PTPRA-208ENST00000455631 NOGQ13253 232 aa30.65■■■□□ 2.5
PTPRA-208ENST00000455631 NFE2L2Q16236 605 aa30.65■■■□□ 2.5
PTPRA-208ENST00000455631 SHTN1A0MZ66 631 aa30.64■■■□□ 2.5
PTPRA-208ENST00000455631 CNOT7Q9UIV1 285 aaKnown RBP30.64■■■□□ 2.5
PTPRA-208ENST00000455631 EIF2S2P20042 333 aaKnown RBP30.63■■■□□ 2.49
PTPRA-208ENST00000455631 HUNKP57058 714 aa30.63■■■□□ 2.49
PTPRA-208ENST00000455631 LRP10Q7Z4F1 713 aa30.63■■■□□ 2.49
PTPRA-208ENST00000455631 ZIC5Q96T25 663 aa30.63■■■□□ 2.49
PTPRA-208ENST00000455631 YDJCA8MPS7 323 aa30.62■■■□□ 2.49
PTPRA-208ENST00000455631 H7C1D1 291 aa30.62■■■□□ 2.49
PTPRA-208ENST00000455631 HCLS1P14317 486 aaPredicted RBP30.62■■■□□ 2.49
PTPRA-208ENST00000455631 DDX46Q7L014 1031 aaKnown RBP30.62■■■□□ 2.49
PTPRA-208ENST00000455631 MICALL2Q8IY33 904 aa30.62■■■□□ 2.49
PTPRA-208ENST00000455631 PLEKHF1Q96S99 279 aa30.62■■■□□ 2.49
PTPRA-208ENST00000455631 TSPYL4Q9UJ04 414 aa30.62■■■□□ 2.49
PTPRA-208ENST00000455631 DUOX1Q9NRD9 1551 aa30.62■■■□□ 2.49
PTPRA-208ENST00000455631 TAF1P21675 1872 aa30.61■■■□□ 2.49
PTPRA-208ENST00000455631 ANXA1P04083 346 aa30.61■■■□□ 2.49
PTPRA-208ENST00000455631 PROSER3Q2NL68 480 aa30.61■■■□□ 2.49
PTPRA-208ENST00000455631 USP48Q86UV5 1035 aa30.61■■■□□ 2.49
PTPRA-208ENST00000455631 GRAPQ13588 217 aa30.6■■■□□ 2.49
PTPRA-208ENST00000455631 PDIA6Q15084 440 aa30.6■■■□□ 2.49
PTPRA-208ENST00000455631 GRAPLQ8TC17 118 aaPredicted RBP30.6■■■□□ 2.49
PTPRA-208ENST00000455631 MAPK8IP3Q9UPT6 1336 aa30.59■■■□□ 2.49
PTPRA-208ENST00000455631 LRRC37AA6NMS7 1700 aa30.59■■■□□ 2.49
PTPRA-208ENST00000455631 HSP90AB3PQ58FF7 597 aa30.58■■■□□ 2.49
PTPRA-208ENST00000455631 DLK2Q6UY11 383 aa30.58■■■□□ 2.49
PTPRA-208ENST00000455631 NLRP10Q86W26 655 aa30.58■■■□□ 2.49
PTPRA-208ENST00000455631 ZBTB12Q9Y330 459 aaPredicted RBP30.58■■■□□ 2.49
PTPRA-208ENST00000455631 TRMT112Q9UI30 125 aaKnown RBP30.57■■■□□ 2.48
PTPRA-208ENST00000455631 SAMD7Q7Z3H4 446 aa30.56■■■□□ 2.48
PTPRA-208ENST00000455631 PCDH10Q9P2E7 1040 aa30.56■■■□□ 2.48
PTPRA-208ENST00000455631 SH3TC1Q8TE82 1336 aa30.55■■■□□ 2.48
PTPRA-208ENST00000455631 AIMP1Q12904 312 aaKnown RBP30.55■■■□□ 2.48
PTPRA-208ENST00000455631 RGMBQ6NW40 437 aa30.54■■■□□ 2.48
PTPRA-208ENST00000455631 COPS6Q7L5N1 327 aa30.54■■■□□ 2.48
PTPRA-208ENST00000455631 KRT26Q7Z3Y9 468 aa30.54■■■□□ 2.48
PTPRA-208ENST00000455631 PSMD14O00487 310 aa30.53■■■□□ 2.48
PTPRA-208ENST00000455631 TBC1D10BQ4KMP7 808 aaPredicted RBP30.53■■■□□ 2.48
PTPRA-208ENST00000455631 TMC4Q7Z404 712 aa30.53■■■□□ 2.48
PTPRA-208ENST00000455631 XAGE3Q8WTP9 111 aa30.53■■■□□ 2.48
PTPRA-208ENST00000455631 NECTIN2Q92692 538 aa30.53■■■□□ 2.48
PTPRA-208ENST00000455631 DPF2Q92785 391 aa30.53■■■□□ 2.48
PTPRA-208ENST00000455631 DBNDD1Q9H9R9 158 aa30.53■■■□□ 2.48
PTPRA-208ENST00000455631 GBA2Q9HCG7 927 aaPredicted RBP30.53■■■□□ 2.48
PTPRA-208ENST00000455631 FAM155AB1AL88 458 aaPredicted RBP30.52■■■□□ 2.48
PTPRA-208ENST00000455631 ZNF428Q96B54 188 aa30.52■■■□□ 2.48
PTPRA-208ENST00000455631 PNNQ9H307 717 aaKnown RBP30.52■■■□□ 2.48
PTPRA-208ENST00000455631 POLR2AP24928 1970 aaKnown RBP30.52■■■□□ 2.48
PTPRA-208ENST00000455631 DDX60Q8IY21 1712 aaKnown RBP30.51■■■□□ 2.47
PTPRA-208ENST00000455631 TCIRG1Q13488 830 aa30.51■■■□□ 2.47
PTPRA-208ENST00000455631 WASHC4Q2M389 1173 aa30.51■■■□□ 2.47
PTPRA-208ENST00000455631 C2orf69Q8N8R5 385 aa30.51■■■□□ 2.47
PTPRA-208ENST00000455631 SAGE1Q9NXZ1 904 aa30.51■■■□□ 2.47
PTPRA-208ENST00000455631 ADM5C9JUS6 153 aa30.5■■■□□ 2.47
PTPRA-208ENST00000455631 EGFRP00533 1210 aa30.5■■■□□ 2.47
PTPRA-208ENST00000455631 DCPSQ96C86 337 aaKnown RBP30.5■■■□□ 2.47
PTPRA-208ENST00000455631 RBM26Q5T8P6 1007 aaKnown RBP30.49■■■□□ 2.47
PTPRA-208ENST00000455631 CCDC102AQ96A19 550 aa30.49■■■□□ 2.47
PTPRA-208ENST00000455631 NSFL1CQ9UNZ2 370 aaKnown RBP30.49■■■□□ 2.47
PTPRA-208ENST00000455631 AKAP11Q9UKA4 1901 aa30.48■■■□□ 2.47
PTPRA-208ENST00000455631 RIMBP2O15034 1052 aa30.48■■■□□ 2.47
PTPRA-208ENST00000455631 TNRC18O15417 2968 aaPredicted RBP30.48■■■□□ 2.47
PTPRA-208ENST00000455631 ZNF157P51786 506 aaPredicted RBP30.48■■■□□ 2.47
PTPRA-208ENST00000455631 SOX10P56693 466 aa30.48■■■□□ 2.47
PTPRA-208ENST00000455631 KIF23Q02241 960 aaPredicted RBP30.48■■■□□ 2.47
PTPRA-208ENST00000455631 C6orf229H3BNL8 230 aa30.46■■■□□ 2.47
PTPRA-208ENST00000455631 RPS12P25398 132 aaKnown RBP30.46■■■□□ 2.47
PTPRA-208ENST00000455631 PDE4DIPQ5VU43 2346 aa30.46■■■□□ 2.47
PTPRA-208ENST00000455631 ECE2O60344 883 aa30.45■■■□□ 2.47
PTPRA-208ENST00000455631 TRPA1O75762 1119 aa30.45■■■□□ 2.47
PTPRA-208ENST00000455631 CELF1Q92879 486 aaKnown RBP30.45■■■□□ 2.47
PTPRA-208ENST00000455631 RNF186Q9NXI6 227 aa30.45■■■□□ 2.47
PTPRA-208ENST00000455631 RIPK4P57078 832 aa30.44■■■□□ 2.46
PTPRA-208ENST00000455631 RTL9Q8NET4 1388 aa30.43■■■□□ 2.46
PTPRA-208ENST00000455631 DOK7Q18PE1 504 aa30.43■■■□□ 2.46
PTPRA-208ENST00000455631 KIF4BQ2VIQ3 1234 aa30.43■■■□□ 2.46
PTPRA-208ENST00000455631 BABAM1Q9NWV8 329 aa30.43■■■□□ 2.46
PTPRA-208ENST00000455631 POLLQ9UGP5 575 aa30.43■■■□□ 2.46
PTPRA-208ENST00000455631 COL4A1P02462 1669 aa30.42■■■□□ 2.46
PTPRA-208ENST00000455631 GPSM2P81274 684 aa30.42■■■□□ 2.46
PTPRA-208ENST00000455631 EYA3Q99504 573 aa30.42■■■□□ 2.46
PTPRA-208ENST00000455631 KCNQ5Q9NR82 932 aa30.42■■■□□ 2.46
PTPRA-208ENST00000455631 GGA3Q9NZ52 723 aa30.42■■■□□ 2.46
PTPRA-208ENST00000455631 SLC10A3P09131 477 aa30.41■■■□□ 2.46
PTPRA-208ENST00000455631 SULF1Q8IWU6 871 aa30.41■■■□□ 2.46
PTPRA-208ENST00000455631 FAM89AQ96GI7 184 aa30.4■■■□□ 2.46
PTPRA-208ENST00000455631 SCN9AQ15858 1988 aa30.39■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms