RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 ATP6V1DQ9Y5K8 247 aa14.6□□□□□ -0.07
SEMA4D-213ENST00000455551 HSPA2P54652 639 aa14.6□□□□□ -0.07
SEMA4D-213ENST00000455551 CADPS2Q86UW7 1296 aa14.6□□□□□ -0.07
SEMA4D-213ENST00000455551 COL15A1P39059 1388 aa14.59□□□□□ -0.07
SEMA4D-213ENST00000455551 TAF5LO75529 589 aa14.59□□□□□ -0.07
SEMA4D-213ENST00000455551 UBE2HP62256 183 aa14.59□□□□□ -0.07
SEMA4D-213ENST00000455551 CCDC183Q5T5S1 534 aa14.59□□□□□ -0.07
SEMA4D-213ENST00000455551 LARP1BQ659C4 914 aaKnown RBP14.59□□□□□ -0.07
SEMA4D-213ENST00000455551 TOM1L2Q6ZVM7 507 aa14.59□□□□□ -0.07
SEMA4D-213ENST00000455551 PLBD2Q8NHP8 589 aa14.59□□□□□ -0.07
SEMA4D-213ENST00000455551 NEUROD6Q96NK8 337 aa14.59□□□□□ -0.07
SEMA4D-213ENST00000455551 ZBTB3Q9H5J0 574 aa14.59□□□□□ -0.07
SEMA4D-213ENST00000455551 ATP5JP18859 108 aa14.59□□□□□ -0.07
SEMA4D-213ENST00000455551 SLFNL1Q499Z3 407 aa14.59□□□□□ -0.07
SEMA4D-213ENST00000455551 PRDM11Q9NQV5 511 aa14.59□□□□□ -0.07
SEMA4D-213ENST00000455551 SPATA31A3Q5VYP0 1347 aa14.59□□□□□ -0.07
SEMA4D-213ENST00000455551 A1BGP04217 495 aa14.59□□□□□ -0.07
SEMA4D-213ENST00000455551 RPS6KB1P23443 525 aa14.59□□□□□ -0.07
SEMA4D-213ENST00000455551 RABL6Q3YEC7 729 aaPredicted RBP14.59□□□□□ -0.07
SEMA4D-213ENST00000455551 CDC37L1Q7L3B6 337 aa14.59□□□□□ -0.07
SEMA4D-213ENST00000455551 STRCP1A6NGW2 1772 aa14.58□□□□□ -0.07
SEMA4D-213ENST00000455551 ZNF330Q9Y3S2 320 aaPredicted RBP14.58□□□□□ -0.07
SEMA4D-213ENST00000455551 TOB2Q14106 344 aaPredicted RBP14.58□□□□□ -0.08
SEMA4D-213ENST00000455551 SNRKQ9NRH2 765 aa14.58□□□□□ -0.08
SEMA4D-213ENST00000455551 PTMAP06454 111 aaKnown RBP14.58□□□□□ -0.08
SEMA4D-213ENST00000455551 HCLS1P14317 486 aaPredicted RBP14.58□□□□□ -0.08
SEMA4D-213ENST00000455551 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.58□□□□□ -0.08
SEMA4D-213ENST00000455551 MRC1P22897 1456 aa14.58□□□□□ -0.08
SEMA4D-213ENST00000455551 CASP7P55210 303 aa14.57□□□□□ -0.08
SEMA4D-213ENST00000455551 GIMAP6Q6P9H5 292 aa14.57□□□□□ -0.08
SEMA4D-213ENST00000455551 ARFGEF2Q9Y6D5 1785 aa14.57□□□□□ -0.08
SEMA4D-213ENST00000455551 ZNF609O15014 1411 aa14.57□□□□□ -0.08
SEMA4D-213ENST00000455551 LRRC2Q9BYS8 371 aa14.57□□□□□ -0.08
SEMA4D-213ENST00000455551 NOL7Q9UMY1 257 aaKnown RBP14.57□□□□□ -0.08
SEMA4D-213ENST00000455551 ZNF594Q96JF6 807 aaPredicted RBP14.57□□□□□ -0.08
SEMA4D-213ENST00000455551 TIMM10P62072 90 aa14.56□□□□□ -0.08
SEMA4D-213ENST00000455551 ZCRB1Q8TBF4 217 aaKnown RBP14.56□□□□□ -0.08
SEMA4D-213ENST00000455551 USP25Q9UHP3 1055 aa14.56□□□□□ -0.08
SEMA4D-213ENST00000455551 GOLIM4O00461 696 aa14.55□□□□□ -0.08
SEMA4D-213ENST00000455551 FOXO4P98177 505 aa14.55□□□□□ -0.08
SEMA4D-213ENST00000455551 HS1BP3Q53T59 392 aa14.55□□□□□ -0.08
SEMA4D-213ENST00000455551 HSP90B1P14625 803 aaKnown RBP14.55□□□□□ -0.08
SEMA4D-213ENST00000455551 STRN4Q9NRL3 753 aa14.55□□□□□ -0.08
SEMA4D-213ENST00000455551 CWC25Q9NXE8 425 aaPredicted RBP14.55□□□□□ -0.08
SEMA4D-213ENST00000455551 HMG20BQ9P0W2 317 aa14.55□□□□□ -0.08
SEMA4D-213ENST00000455551 ANKRD1Q15327 319 aa14.55□□□□□ -0.08
SEMA4D-213ENST00000455551 HAUS7Q99871 368 aa14.55□□□□□ -0.08
SEMA4D-213ENST00000455551 JAK2O60674 1132 aa14.54□□□□□ -0.08
SEMA4D-213ENST00000455551 PLCB2Q00722 1185 aa14.54□□□□□ -0.08
SEMA4D-213ENST00000455551 LRRC24Q50LG9 513 aa14.54□□□□□ -0.08
SEMA4D-213ENST00000455551 ZKSCAN5Q9Y2L8 839 aa14.54□□□□□ -0.08
SEMA4D-213ENST00000455551 BRINP3Q76B58 766 aa14.54□□□□□ -0.08
SEMA4D-213ENST00000455551 TTC6Q86TZ1 520 aa14.54□□□□□ -0.08
SEMA4D-213ENST00000455551 CCDC85AQ96PX6 553 aaPredicted RBP14.54□□□□□ -0.08
SEMA4D-213ENST00000455551 NEK1Q96PY6 1258 aa14.54□□□□□ -0.08
SEMA4D-213ENST00000455551 CCDC39Q9UFE4 941 aa14.54□□□□□ -0.08
SEMA4D-213ENST00000455551 PKD1L3Q7Z443 1732 aa14.54□□□□□ -0.08
SEMA4D-213ENST00000455551 PCDH11XQ9BZA7 1347 aa14.54□□□□□ -0.08
SEMA4D-213ENST00000455551 PCDH11YQ9BZA8 1340 aa14.54□□□□□ -0.08
SEMA4D-213ENST00000455551 H7C1W4 665 aa14.54□□□□□ -0.08
SEMA4D-213ENST00000455551 CYP21A2P08686 494 aa14.54□□□□□ -0.08
SEMA4D-213ENST00000455551 MCMDC2Q4G0Z9 681 aa14.54□□□□□ -0.08
SEMA4D-213ENST00000455551 ATG9AQ7Z3C6 839 aa14.54□□□□□ -0.08
SEMA4D-213ENST00000455551 TFIP11Q9UBB9 837 aaKnown RBP14.54□□□□□ -0.08
SEMA4D-213ENST00000455551 DCCP43146 1447 aa14.54□□□□□ -0.08
SEMA4D-213ENST00000455551 CSPP1Q1MSJ5 1256 aa14.53□□□□□ -0.08
SEMA4D-213ENST00000455551 Q6ZUG5 572 aa14.53□□□□□ -0.08
SEMA4D-213ENST00000455551 JCADQ9P266 1359 aa14.53□□□□□ -0.08
SEMA4D-213ENST00000455551 FOSBP53539 338 aa14.53□□□□□ -0.08
SEMA4D-213ENST00000455551 FGD1P98174 961 aa14.53□□□□□ -0.08
SEMA4D-213ENST00000455551 DDX11Q96FC9 970 aa14.53□□□□□ -0.08
SEMA4D-213ENST00000455551 ARID3AQ99856 593 aa14.53□□□□□ -0.08
SEMA4D-213ENST00000455551 GLI3P10071 1580 aa14.53□□□□□ -0.08
SEMA4D-213ENST00000455551 WDR17Q8IZU2 1322 aa14.53□□□□□ -0.08
SEMA4D-213ENST00000455551 KRT85P78386 507 aa14.53□□□□□ -0.08
SEMA4D-213ENST00000455551 CPDO75976 1380 aa14.52□□□□□ -0.08
SEMA4D-213ENST00000455551 USPL1Q5W0Q7 1092 aa14.52□□□□□ -0.08
SEMA4D-213ENST00000455551 KBTBD3Q8NAB2 608 aa14.52□□□□□ -0.08
SEMA4D-213ENST00000455551 PUS3Q9BZE2 481 aaKnown RBP14.52□□□□□ -0.08
SEMA4D-213ENST00000455551 OFD1O75665 1012 aa14.52□□□□□ -0.09
SEMA4D-213ENST00000455551 PDCP20941 246 aa14.52□□□□□ -0.09
SEMA4D-213ENST00000455551 PAG1Q9NWQ8 432 aa14.52□□□□□ -0.09
SEMA4D-213ENST00000455551 U3KPZ7 1027 aaPredicted RBP14.52□□□□□ -0.09
SEMA4D-213ENST00000455551 A0A0G2JLW4 131 aa14.52□□□□□ -0.09
SEMA4D-213ENST00000455551 PPFIA3O75145 1194 aa14.52□□□□□ -0.09
SEMA4D-213ENST00000455551 KRT32Q14532 448 aa14.52□□□□□ -0.09
SEMA4D-213ENST00000455551 CAMK4Q16566 473 aa14.52□□□□□ -0.09
SEMA4D-213ENST00000455551 BRF1Q92994 677 aa14.52□□□□□ -0.09
SEMA4D-213ENST00000455551 TSGA10IPQ3SY00 556 aa14.51□□□□□ -0.09
SEMA4D-213ENST00000455551 STOX1Q6ZVD7 989 aa14.51□□□□□ -0.09
SEMA4D-213ENST00000455551 FAM184AQ8NB25 1140 aa14.51□□□□□ -0.09
SEMA4D-213ENST00000455551 ZNF830Q96NB3 372 aaPredicted RBP14.51□□□□□ -0.09
SEMA4D-213ENST00000455551 LETM1O95202 739 aaPredicted RBP14.5□□□□□ -0.09
SEMA4D-213ENST00000455551 LIG1P18858 919 aa14.5□□□□□ -0.09
SEMA4D-213ENST00000455551 NAP1L2Q9ULW6 460 aaPredicted RBP14.5□□□□□ -0.09
SEMA4D-213ENST00000455551 R3HCC1Q9Y3T6 440 aaKnown RBP14.5□□□□□ -0.09
SEMA4D-213ENST00000455551 ABCC6O95255 1503 aa14.5□□□□□ -0.09
SEMA4D-213ENST00000455551 ADCY5O95622 1261 aa14.5□□□□□ -0.09
SEMA4D-213ENST00000455551 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.5□□□□□ -0.09
SEMA4D-213ENST00000455551 GTF3C6Q969F1 213 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms