RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 LAMB2P55268 1798 aa13.43□□□□□ -0.26
SYPL1-202ENST00000455385 MYH3P11055 1940 aa13.43□□□□□ -0.26
SYPL1-202ENST00000455385 HSP90B1P14625 803 aaKnown RBP13.43□□□□□ -0.26
SYPL1-202ENST00000455385 FAM161AQ3B820 660 aa13.43□□□□□ -0.26
SYPL1-202ENST00000455385 CRY2Q49AN0 593 aa13.43□□□□□ -0.26
SYPL1-202ENST00000455385 RPAP2Q8IXW5 612 aaPredicted RBP13.43□□□□□ -0.26
SYPL1-202ENST00000455385 SEC31BQ9NQW1 1179 aa13.43□□□□□ -0.26
SYPL1-202ENST00000455385 RIC1Q4ADV7 1423 aa13.43□□□□□ -0.26
SYPL1-202ENST00000455385 C10orf71Q711Q0 1435 aa13.43□□□□□ -0.26
SYPL1-202ENST00000455385 RFX5P48382 616 aaPredicted RBP13.42□□□□□ -0.26
SYPL1-202ENST00000455385 CHMP3Q9Y3E7 222 aa13.42□□□□□ -0.26
SYPL1-202ENST00000455385 SRGAP3O43295 1099 aa13.42□□□□□ -0.26
SYPL1-202ENST00000455385 SRGNP10124 158 aa13.42□□□□□ -0.26
SYPL1-202ENST00000455385 CHRNA5P30532 468 aa13.42□□□□□ -0.26
SYPL1-202ENST00000455385 PDE6BP35913 854 aa13.42□□□□□ -0.26
SYPL1-202ENST00000455385 SSH3Q8TE77 659 aa13.42□□□□□ -0.26
SYPL1-202ENST00000455385 COL4A1P02462 1669 aa13.42□□□□□ -0.26
SYPL1-202ENST00000455385 TAF1P21675 1872 aa13.41□□□□□ -0.26
SYPL1-202ENST00000455385 POLA2Q14181 598 aa13.41□□□□□ -0.26
SYPL1-202ENST00000455385 CCDC152Q4G0S7 254 aa13.41□□□□□ -0.26
SYPL1-202ENST00000455385 KLHDC4Q8TBB5 520 aa13.41□□□□□ -0.26
SYPL1-202ENST00000455385 ZNF594Q96JF6 807 aaPredicted RBP13.41□□□□□ -0.26
SYPL1-202ENST00000455385 ITGA6P23229 1130 aa13.41□□□□□ -0.26
SYPL1-202ENST00000455385 PPP1R1BQ9UD71 204 aaPredicted RBP13.41□□□□□ -0.26
SYPL1-202ENST00000455385 IGHDP01880 384 aa13.4□□□□□ -0.26
SYPL1-202ENST00000455385 KCNA3P22001 575 aa13.4□□□□□ -0.26
SYPL1-202ENST00000455385 C2CD5Q86YS7 1000 aa13.4□□□□□ -0.26
SYPL1-202ENST00000455385 PA2G4Q9UQ80 394 aaKnown RBP13.4□□□□□ -0.26
SYPL1-202ENST00000455385 KIF13BQ9NQT8 1826 aa13.4□□□□□ -0.26
SYPL1-202ENST00000455385 A0A0G2JLW4 131 aa13.39□□□□□ -0.27
SYPL1-202ENST00000455385 HOXA10P31260 410 aaPredicted RBP13.39□□□□□ -0.27
SYPL1-202ENST00000455385 PTPN12Q05209 780 aaKnown RBP13.39□□□□□ -0.27
SYPL1-202ENST00000455385 IFIT5Q13325 482 aaKnown RBP13.39□□□□□ -0.27
SYPL1-202ENST00000455385 ERICH6BQ5W0A0 696 aa13.39□□□□□ -0.27
SYPL1-202ENST00000455385 CELF1Q92879 486 aaKnown RBP13.39□□□□□ -0.27
SYPL1-202ENST00000455385 RTL9Q8NET4 1388 aa13.39□□□□□ -0.27
SYPL1-202ENST00000455385 H0YIN7 160 aa13.39□□□□□ -0.27
SYPL1-202ENST00000455385 DPEP1P16444 411 aa13.39□□□□□ -0.27
SYPL1-202ENST00000455385 CCDC57Q2TAC2 916 aa13.39□□□□□ -0.27
SYPL1-202ENST00000455385 KLHL34Q8N239 644 aa13.39□□□□□ -0.27
SYPL1-202ENST00000455385 CD2APQ9Y5K6 639 aa13.39□□□□□ -0.27
SYPL1-202ENST00000455385 COL11A2P13942 1736 aaPredicted RBP13.38□□□□□ -0.27
SYPL1-202ENST00000455385 ANKRD18BA2A2Z9 1011 aa13.38□□□□□ -0.27
SYPL1-202ENST00000455385 DDX46Q7L014 1031 aaKnown RBP13.38□□□□□ -0.27
SYPL1-202ENST00000455385 SLC51AQ86UW1 340 aa13.38□□□□□ -0.27
SYPL1-202ENST00000455385 RPGRQ92834 1020 aaKnown RBP13.38□□□□□ -0.27
SYPL1-202ENST00000455385 NPR1P16066 1061 aa13.38□□□□□ -0.27
SYPL1-202ENST00000455385 TGFB2P61812 414 aa13.38□□□□□ -0.27
SYPL1-202ENST00000455385 HDAC1Q13547 482 aaPredicted RBP13.38□□□□□ -0.27
SYPL1-202ENST00000455385 ZNF622Q969S3 477 aaKnown RBP eCLIP13.38□□□□□ -0.27
SYPL1-202ENST00000455385 MASTLQ96GX5 879 aa13.38□□□□□ -0.27
SYPL1-202ENST00000455385 CRAMP1Q96RY5 1269 aa13.38□□□□□ -0.27
SYPL1-202ENST00000455385 PUS3Q9BZE2 481 aaKnown RBP13.38□□□□□ -0.27
SYPL1-202ENST00000455385 GTF3C3Q9Y5Q9 886 aa13.38□□□□□ -0.27
SYPL1-202ENST00000455385 RPS8P62241 208 aaKnown RBP13.37□□□□□ -0.27
SYPL1-202ENST00000455385 NLGN2Q8NFZ4 835 aa13.37□□□□□ -0.27
SYPL1-202ENST00000455385 RBM17Q96I25 401 aaKnown RBP13.37□□□□□ -0.27
SYPL1-202ENST00000455385 FHDC1Q9C0D6 1143 aaPredicted RBP13.37□□□□□ -0.27
SYPL1-202ENST00000455385 COPRSQ9NQ92 184 aa13.37□□□□□ -0.27
SYPL1-202ENST00000455385 KIAA1551Q9HCM1 1747 aa13.37□□□□□ -0.27
SYPL1-202ENST00000455385 SIL1Q9H173 461 aa13.37□□□□□ -0.27
SYPL1-202ENST00000455385 HMMRO75330 724 aa13.36□□□□□ -0.27
SYPL1-202ENST00000455385 GRAPQ13588 217 aa13.36□□□□□ -0.27
SYPL1-202ENST00000455385 LRRC24Q50LG9 513 aa13.36□□□□□ -0.27
SYPL1-202ENST00000455385 STYK1Q6J9G0 422 aa13.36□□□□□ -0.27
SYPL1-202ENST00000455385 GRAPLQ8TC17 118 aaPredicted RBP13.36□□□□□ -0.27
SYPL1-202ENST00000455385 DCTPP1Q9H773 170 aa13.36□□□□□ -0.27
SYPL1-202ENST00000455385 PPP4R2Q9NY27 417 aa13.36□□□□□ -0.27
SYPL1-202ENST00000455385 PDZRN3Q9UPQ7 1066 aa13.36□□□□□ -0.27
SYPL1-202ENST00000455385 EXOC6BQ9Y2D4 811 aa13.36□□□□□ -0.27
SYPL1-202ENST00000455385 NOP58Q9Y2X3 529 aaKnown RBP13.36□□□□□ -0.27
SYPL1-202ENST00000455385 SURF6O75683 361 aaKnown RBP13.35□□□□□ -0.27
SYPL1-202ENST00000455385 B4GALNT3Q6L9W6 998 aa13.35□□□□□ -0.27
SYPL1-202ENST00000455385 ATG9AQ7Z3C6 839 aa13.35□□□□□ -0.27
SYPL1-202ENST00000455385 ANKRD18AQ8IVF6 992 aa13.35□□□□□ -0.27
SYPL1-202ENST00000455385 CDC5LQ99459 802 aaKnown RBP13.35□□□□□ -0.27
SYPL1-202ENST00000455385 RWDD1Q9H446 243 aaPredicted RBP13.35□□□□□ -0.27
SYPL1-202ENST00000455385 GOLGB1Q14789 3259 aaKnown RBP13.35□□□□□ -0.27
SYPL1-202ENST00000455385 ALDH1B1P30837 517 aa13.35□□□□□ -0.27
SYPL1-202ENST00000455385 TAF7LQ5H9L4 462 aa13.35□□□□□ -0.27
SYPL1-202ENST00000455385 LDHAL6AQ6ZMR3 332 aa13.35□□□□□ -0.27
SYPL1-202ENST00000455385 SYT17Q9BSW7 474 aa13.35□□□□□ -0.27
SYPL1-202ENST00000455385 WWC3Q9ULE0 1092 aa13.35□□□□□ -0.27
SYPL1-202ENST00000455385 RIPOR2Q9Y4F9 1068 aa13.35□□□□□ -0.27
SYPL1-202ENST00000455385 EYA2O00167 538 aa13.34□□□□□ -0.27
SYPL1-202ENST00000455385 BSDC1Q9NW68 430 aaPredicted RBP13.34□□□□□ -0.27
SYPL1-202ENST00000455385 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.34□□□□□ -0.27
SYPL1-202ENST00000455385 BBOX1O75936 387 aa13.34□□□□□ -0.27
SYPL1-202ENST00000455385 IGHMBP2P38935 993 aaKnown RBP13.34□□□□□ -0.27
SYPL1-202ENST00000455385 OLFM4Q6UX06 510 aa13.34□□□□□ -0.27
SYPL1-202ENST00000455385 MPHOSPH8Q99549 860 aa13.34□□□□□ -0.27
SYPL1-202ENST00000455385 SLX4Q8IY92 1834 aa13.33□□□□□ -0.27
SYPL1-202ENST00000455385 SASH1O94885 1247 aa13.33□□□□□ -0.28
SYPL1-202ENST00000455385 PRPF40BQ6NWY9 871 aaKnown RBP13.33□□□□□ -0.28
SYPL1-202ENST00000455385 CNKSR1Q969H4 720 aa13.33□□□□□ -0.28
SYPL1-202ENST00000455385 CCDC136Q96JN2 1154 aa13.33□□□□□ -0.28
SYPL1-202ENST00000455385 MINPP1Q9UNW1 487 aa13.33□□□□□ -0.28
SYPL1-202ENST00000455385 DLEC1Q9Y238 1755 aa13.33□□□□□ -0.28
SYPL1-202ENST00000455385 SPEF2Q9C093 1822 aa13.33□□□□□ -0.28
SYPL1-202ENST00000455385 TTLL6Q8N841 843 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms