RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 SRGAP3O43295 1099 aa20.7■□□□□ 0.9
CCDC90B-202ENST00000455220 SF3B3Q15393 1217 aaKnown RBP20.7■□□□□ 0.9
CCDC90B-202ENST00000455220 C3orf67Q6ZVT6 689 aa20.7■□□□□ 0.9
CCDC90B-202ENST00000455220 NLRP3Q96P20 1036 aa20.7■□□□□ 0.9
CCDC90B-202ENST00000455220 SGIP1Q9BQI5 828 aa20.7■□□□□ 0.9
CCDC90B-202ENST00000455220 HMMRO75330 724 aa20.69■□□□□ 0.9
CCDC90B-202ENST00000455220 ATF5Q9Y2D1 282 aaPredicted RBP20.69■□□□□ 0.9
CCDC90B-202ENST00000455220 KLRG2A4D1S0 409 aaPredicted RBP20.68■□□□□ 0.9
CCDC90B-202ENST00000455220 BRIP1Q9BX63 1249 aa20.68■□□□□ 0.9
CCDC90B-202ENST00000455220 C10orf71Q711Q0 1435 aa20.68■□□□□ 0.9
CCDC90B-202ENST00000455220 RFX5P48382 616 aaPredicted RBP20.68■□□□□ 0.9
CCDC90B-202ENST00000455220 FAM161AQ3B820 660 aa20.68■□□□□ 0.9
CCDC90B-202ENST00000455220 CCDC152Q4G0S7 254 aa20.68■□□□□ 0.9
CCDC90B-202ENST00000455220 RWDD1Q9H446 243 aaPredicted RBP20.68■□□□□ 0.9
CCDC90B-202ENST00000455220 IGHDP01880 384 aa20.67■□□□□ 0.9
CCDC90B-202ENST00000455220 POLD1P28340 1107 aa20.67■□□□□ 0.9
CCDC90B-202ENST00000455220 CRY2Q49AN0 593 aa20.67■□□□□ 0.9
CCDC90B-202ENST00000455220 CCDC136Q96JN2 1154 aa20.67■□□□□ 0.9
CCDC90B-202ENST00000455220 GREM2Q9H772 168 aa20.67■□□□□ 0.9
CCDC90B-202ENST00000455220 KIF13BQ9NQT8 1826 aa20.66■□□□□ 0.9
CCDC90B-202ENST00000455220 PTGER2P43116 358 aa20.66■□□□□ 0.9
CCDC90B-202ENST00000455220 CHMP3Q9Y3E7 222 aa20.66■□□□□ 0.9
CCDC90B-202ENST00000455220 ITGA6P23229 1130 aa20.64■□□□□ 0.9
CCDC90B-202ENST00000455220 PTPN12Q05209 780 aaKnown RBP20.64■□□□□ 0.9
CCDC90B-202ENST00000455220 IFIT5Q13325 482 aaKnown RBP20.64■□□□□ 0.9
CCDC90B-202ENST00000455220 CCDC57Q2TAC2 916 aa20.64■□□□□ 0.9
CCDC90B-202ENST00000455220 B4GALNT3Q6L9W6 998 aa20.64■□□□□ 0.9
CCDC90B-202ENST00000455220 KDM2BQ8NHM5 1336 aa20.64■□□□□ 0.9
CCDC90B-202ENST00000455220 CCDC85AQ96PX6 553 aaPredicted RBP20.64■□□□□ 0.9
CCDC90B-202ENST00000455220 COPRSQ9NQ92 184 aa20.64■□□□□ 0.9
CCDC90B-202ENST00000455220 LRP5O75197 1615 aa20.64■□□□□ 0.89
CCDC90B-202ENST00000455220 DCTPP1Q9H773 170 aa20.63■□□□□ 0.89
CCDC90B-202ENST00000455220 NOP58Q9Y2X3 529 aaKnown RBP20.63■□□□□ 0.89
CCDC90B-202ENST00000455220 ANKRD18BA2A2Z9 1011 aa20.63■□□□□ 0.89
CCDC90B-202ENST00000455220 PDE6BP35913 854 aa20.63■□□□□ 0.89
CCDC90B-202ENST00000455220 COL11A2P13942 1736 aaPredicted RBP20.62■□□□□ 0.89
CCDC90B-202ENST00000455220 SPON1Q9HCB6 807 aa20.62■□□□□ 0.89
CCDC90B-202ENST00000455220 SEC31BQ9NQW1 1179 aa20.62■□□□□ 0.89
CCDC90B-202ENST00000455220 HOXA10P31260 410 aaPredicted RBP20.61■□□□□ 0.89
CCDC90B-202ENST00000455220 SMC5Q8IY18 1101 aa20.61■□□□□ 0.89
CCDC90B-202ENST00000455220 KLHDC4Q8TBB5 520 aa20.61■□□□□ 0.89
CCDC90B-202ENST00000455220 GCC1Q96CN9 775 aa20.61■□□□□ 0.89
CCDC90B-202ENST00000455220 PDZRN3Q9UPQ7 1066 aa20.61■□□□□ 0.89
CCDC90B-202ENST00000455220 PA2G4Q9UQ80 394 aaKnown RBP20.61■□□□□ 0.89
CCDC90B-202ENST00000455220 COL4A1P02462 1669 aa20.61■□□□□ 0.89
CCDC90B-202ENST00000455220 SRGNP10124 158 aa20.6■□□□□ 0.89
CCDC90B-202ENST00000455220 CENPQQ7L2Z9 268 aaPredicted RBP20.6■□□□□ 0.89
CCDC90B-202ENST00000455220 FBXO3Q9UK99 471 aa20.6■□□□□ 0.89
CCDC90B-202ENST00000455220 SURF6O75683 361 aaKnown RBP20.59■□□□□ 0.89
CCDC90B-202ENST00000455220 ZNF594Q96JF6 807 aaPredicted RBP20.59■□□□□ 0.89
CCDC90B-202ENST00000455220 CDC5LQ99459 802 aaKnown RBP20.59■□□□□ 0.89
CCDC90B-202ENST00000455220 TAF1P21675 1872 aa20.59■□□□□ 0.89
CCDC90B-202ENST00000455220 DDX46Q7L014 1031 aaKnown RBP20.59■□□□□ 0.89
CCDC90B-202ENST00000455220 RPGRQ92834 1020 aaKnown RBP20.59■□□□□ 0.89
CCDC90B-202ENST00000455220 EXOC6BQ9Y2D4 811 aa20.59■□□□□ 0.89
CCDC90B-202ENST00000455220 DLEC1Q9Y238 1755 aa20.58■□□□□ 0.88
CCDC90B-202ENST00000455220 CIAO1O76071 339 aa20.58■□□□□ 0.88
CCDC90B-202ENST00000455220 NPR1P16066 1061 aa20.58■□□□□ 0.88
CCDC90B-202ENST00000455220 HSP90AB4PQ58FF6 505 aa20.58■□□□□ 0.88
CCDC90B-202ENST00000455220 TAF7LQ5H9L4 462 aa20.58■□□□□ 0.88
CCDC90B-202ENST00000455220 RBM17Q96I25 401 aaKnown RBP20.58■□□□□ 0.88
CCDC90B-202ENST00000455220 KIAA1551Q9HCM1 1747 aa20.57■□□□□ 0.88
CCDC90B-202ENST00000455220 EYA2O00167 538 aa20.57■□□□□ 0.88
CCDC90B-202ENST00000455220 GRAPQ13588 217 aa20.57■□□□□ 0.88
CCDC90B-202ENST00000455220 C2CD5Q86YS7 1000 aa20.57■□□□□ 0.88
CCDC90B-202ENST00000455220 GRAPLQ8TC17 118 aaPredicted RBP20.57■□□□□ 0.88
CCDC90B-202ENST00000455220 CELF1Q92879 486 aaKnown RBP20.57■□□□□ 0.88
CCDC90B-202ENST00000455220 MASTLQ96GX5 879 aa20.57■□□□□ 0.88
CCDC90B-202ENST00000455220 CRAMP1Q96RY5 1269 aa20.57■□□□□ 0.88
CCDC90B-202ENST00000455220 RAB11FIP3O75154 756 aa20.56■□□□□ 0.88
CCDC90B-202ENST00000455220 ANKRD18AQ8IVF6 992 aa20.56■□□□□ 0.88
CCDC90B-202ENST00000455220 SIL1Q9H173 461 aa20.56■□□□□ 0.88
CCDC90B-202ENST00000455220 SPEF2Q9C093 1822 aa20.56■□□□□ 0.88
CCDC90B-202ENST00000455220 H0YIN7 160 aa20.55■□□□□ 0.88
CCDC90B-202ENST00000455220 IGHMBP2P38935 993 aaKnown RBP20.55■□□□□ 0.88
CCDC90B-202ENST00000455220 RPS8P62241 208 aaKnown RBP20.55■□□□□ 0.88
CCDC90B-202ENST00000455220 G3BP1Q13283 466 aaKnown RBP eCLIP20.55■□□□□ 0.88
CCDC90B-202ENST00000455220 STYK1Q6J9G0 422 aa20.55■□□□□ 0.88
CCDC90B-202ENST00000455220 ATG9AQ7Z3C6 839 aa20.55■□□□□ 0.88
CCDC90B-202ENST00000455220 PUS3Q9BZE2 481 aaKnown RBP20.55■□□□□ 0.88
CCDC90B-202ENST00000455220 CD2APQ9Y5K6 639 aa20.55■□□□□ 0.88
CCDC90B-202ENST00000455220 IL15P40933 162 aaPredicted RBP20.55■□□□□ 0.88
CCDC90B-202ENST00000455220 TGFB2P61812 414 aa20.55■□□□□ 0.88
CCDC90B-202ENST00000455220 LRRC24Q50LG9 513 aa20.55■□□□□ 0.88
CCDC90B-202ENST00000455220 LDHAL6AQ6ZMR3 332 aa20.55■□□□□ 0.88
CCDC90B-202ENST00000455220 BSDC1Q9NW68 430 aaPredicted RBP20.55■□□□□ 0.88
CCDC90B-202ENST00000455220 RIPOR2Q9Y4F9 1068 aa20.55■□□□□ 0.88
CCDC90B-202ENST00000455220 ERC1Q8IUD2 1116 aa20.54■□□□□ 0.88
CCDC90B-202ENST00000455220 MPHOSPH8Q99549 860 aa20.54■□□□□ 0.88
CCDC90B-202ENST00000455220 SASH1O94885 1247 aa20.53■□□□□ 0.88
CCDC90B-202ENST00000455220 CHRNA5P30532 468 aa20.53■□□□□ 0.88
CCDC90B-202ENST00000455220 BBOX1O75936 387 aa20.52■□□□□ 0.88
CCDC90B-202ENST00000455220 ALDH1B1P30837 517 aa20.52■□□□□ 0.88
CCDC90B-202ENST00000455220 OS9Q13438 667 aaPredicted RBP20.52■□□□□ 0.88
CCDC90B-202ENST00000455220 RHPN1Q8TCX5 695 aa20.52■□□□□ 0.88
CCDC90B-202ENST00000455220 KIF1BPQ96EK5 621 aa20.52■□□□□ 0.88
CCDC90B-202ENST00000455220 CNNM1Q9NRU3 951 aa20.52■□□□□ 0.88
CCDC90B-202ENST00000455220 NUCB1Q02818 461 aa20.51■□□□□ 0.87
CCDC90B-202ENST00000455220 LRRCC1Q9C099 1032 aa20.51■□□□□ 0.87
CCDC90B-202ENST00000455220 A0A1B0GUL6 1792 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms