RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 C1orf141Q5JVX7 400 aa12.74□□□□□ -0.37
GTF3C2-206ENST00000454704 PI4K2BQ8TCG2 481 aa12.74□□□□□ -0.37
GTF3C2-206ENST00000454704 COL5A3P25940 1745 aaPredicted RBP12.74□□□□□ -0.37
GTF3C2-206ENST00000454704 SRGAP3O43295 1099 aa12.73□□□□□ -0.37
GTF3C2-206ENST00000454704 DDX58O95786 925 aaKnown RBP12.73□□□□□ -0.37
GTF3C2-206ENST00000454704 LRSAM1Q6UWE0 723 aa12.73□□□□□ -0.37
GTF3C2-206ENST00000454704 KIAA1211Q6ZU35 1233 aa12.73□□□□□ -0.37
GTF3C2-206ENST00000454704 ZGPATQ8N5A5 531 aaKnown RBP12.73□□□□□ -0.37
GTF3C2-206ENST00000454704 TMEM87AQ8NBN3 555 aa12.73□□□□□ -0.37
GTF3C2-206ENST00000454704 TM6SF1Q9BZW5 370 aa12.73□□□□□ -0.37
GTF3C2-206ENST00000454704 HYPKQ9NX55 129 aa12.73□□□□□ -0.37
GTF3C2-206ENST00000454704 ZDHHC9Q9Y397 364 aa12.73□□□□□ -0.37
GTF3C2-206ENST00000454704 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.73□□□□□ -0.37
GTF3C2-206ENST00000454704 ATP6V1DQ9Y5K8 247 aa12.73□□□□□ -0.37
GTF3C2-206ENST00000454704 LAMB4A4D0S4 1761 aa12.73□□□□□ -0.37
GTF3C2-206ENST00000454704 UTYO14607 1347 aa12.73□□□□□ -0.37
GTF3C2-206ENST00000454704 BTBD11A6QL63 1104 aa12.72□□□□□ -0.37
GTF3C2-206ENST00000454704 MCM5P33992 734 aa12.72□□□□□ -0.37
GTF3C2-206ENST00000454704 CSPP1Q1MSJ5 1256 aa12.72□□□□□ -0.37
GTF3C2-206ENST00000454704 CAVIN1Q6NZI2 390 aaKnown RBP12.72□□□□□ -0.37
GTF3C2-206ENST00000454704 ZNF530Q6P9A1 599 aaPredicted RBP12.72□□□□□ -0.37
GTF3C2-206ENST00000454704 ZSCAN30Q86W11 494 aa12.72□□□□□ -0.37
GTF3C2-206ENST00000454704 CLASRPQ8N2M8 674 aaKnown RBP12.72□□□□□ -0.37
GTF3C2-206ENST00000454704 ZSCAN31Q96LW9 406 aaPredicted RBP12.72□□□□□ -0.37
GTF3C2-206ENST00000454704 MRC1P22897 1456 aa12.72□□□□□ -0.37
GTF3C2-206ENST00000454704 ZNF831Q5JPB2 1677 aa12.72□□□□□ -0.37
GTF3C2-206ENST00000454704 RNMTO43148 476 aaKnown RBP12.71□□□□□ -0.37
GTF3C2-206ENST00000454704 LETM1O95202 739 aaPredicted RBP12.71□□□□□ -0.37
GTF3C2-206ENST00000454704 TERF1P54274 439 aa12.71□□□□□ -0.37
GTF3C2-206ENST00000454704 KSR2Q6VAB6 950 aa12.71□□□□□ -0.37
GTF3C2-206ENST00000454704 FAM184AQ8NB25 1140 aa12.71□□□□□ -0.37
GTF3C2-206ENST00000454704 PDLIM2Q96JY6 352 aa12.71□□□□□ -0.37
GTF3C2-206ENST00000454704 SLC4A9Q96Q91 983 aa12.71□□□□□ -0.37
GTF3C2-206ENST00000454704 PHAXQ9H814 394 aaKnown RBP12.71□□□□□ -0.37
GTF3C2-206ENST00000454704 RTCBQ9Y3I0 505 aaKnown RBP12.71□□□□□ -0.37
GTF3C2-206ENST00000454704 KDM6AO15550 1401 aaPredicted RBP12.71□□□□□ -0.37
GTF3C2-206ENST00000454704 C10orf71Q711Q0 1435 aa12.71□□□□□ -0.37
GTF3C2-206ENST00000454704 C4AP0C0L4 1744 aa12.71□□□□□ -0.37
GTF3C2-206ENST00000454704 PI4KAP2A4QPH2 592 aa12.71□□□□□ -0.38
GTF3C2-206ENST00000454704 PRPF40AO75400 957 aaKnown RBP12.71□□□□□ -0.38
GTF3C2-206ENST00000454704 HSPA6P17066 643 aa12.71□□□□□ -0.38
GTF3C2-206ENST00000454704 TRAPPC3LQ5T215 181 aa12.71□□□□□ -0.38
GTF3C2-206ENST00000454704 TICAM2Q86XR7 235 aa12.71□□□□□ -0.38
GTF3C2-206ENST00000454704 PI4KAP1Q8N8J0 262 aa12.71□□□□□ -0.38
GTF3C2-206ENST00000454704 LINS1Q8NG48 757 aa12.71□□□□□ -0.38
GTF3C2-206ENST00000454704 KCNB2Q92953 911 aa12.71□□□□□ -0.38
GTF3C2-206ENST00000454704 SH2B1Q9NRF2 756 aaPredicted RBP12.71□□□□□ -0.38
GTF3C2-206ENST00000454704 CHPF2Q9P2E5 772 aa12.71□□□□□ -0.38
GTF3C2-206ENST00000454704 COL15A1P39059 1388 aa12.7□□□□□ -0.38
GTF3C2-206ENST00000454704 RFX7Q2KHR2 1363 aa12.7□□□□□ -0.38
GTF3C2-206ENST00000454704 ERVV-2B6SEH9 535 aa12.7□□□□□ -0.38
GTF3C2-206ENST00000454704 EVI5LQ96CN4 794 aa12.7□□□□□ -0.38
GTF3C2-206ENST00000454704 DCAF5Q96JK2 942 aa12.7□□□□□ -0.38
GTF3C2-206ENST00000454704 LSG1Q9H089 658 aaKnown RBP12.7□□□□□ -0.38
GTF3C2-206ENST00000454704 SNRKQ9NRH2 765 aa12.7□□□□□ -0.38
GTF3C2-206ENST00000454704 ECHDC1Q9NTX5 307 aa12.7□□□□□ -0.38
GTF3C2-206ENST00000454704 PALD1Q9ULE6 856 aa12.7□□□□□ -0.38
GTF3C2-206ENST00000454704 MYH14Q7Z406 1995 aaKnown RBP12.7□□□□□ -0.38
GTF3C2-206ENST00000454704 CNTNAP4Q9C0A0 1308 aa12.69□□□□□ -0.38
GTF3C2-206ENST00000454704 AFDNP55196 1824 aaKnown RBP12.69□□□□□ -0.38
GTF3C2-206ENST00000454704 A0A0G2JLW4 131 aa12.69□□□□□ -0.38
GTF3C2-206ENST00000454704 MSNP26038 577 aaKnown RBP12.69□□□□□ -0.38
GTF3C2-206ENST00000454704 PKP1Q13835 747 aa12.69□□□□□ -0.38
GTF3C2-206ENST00000454704 UVSSAQ2YD98 709 aa12.69□□□□□ -0.38
GTF3C2-206ENST00000454704 GPT2Q8TD30 523 aa12.69□□□□□ -0.38
GTF3C2-206ENST00000454704 ARHGEF1Q92888 912 aaKnown RBP12.69□□□□□ -0.38
GTF3C2-206ENST00000454704 TTC14Q96N46 770 aa12.69□□□□□ -0.38
GTF3C2-206ENST00000454704 IL1RAPL2Q9NP60 686 aa12.69□□□□□ -0.38
GTF3C2-206ENST00000454704 DDX21Q9NR30 783 aaKnown RBP eCLIP12.69□□□□□ -0.38
GTF3C2-206ENST00000454704 DIAPH3Q9NSV4 1193 aa12.69□□□□□ -0.38
GTF3C2-206ENST00000454704 LIMCH1Q9UPQ0 1083 aa12.69□□□□□ -0.38
GTF3C2-206ENST00000454704 BCS1LQ9Y276 419 aa12.69□□□□□ -0.38
GTF3C2-206ENST00000454704 BRCA1P38398 1863 aaKnown RBP12.69□□□□□ -0.38
GTF3C2-206ENST00000454704 TCHHQ07283 1943 aa12.68□□□□□ -0.38
GTF3C2-206ENST00000454704 KIF3CO14782 793 aa12.68□□□□□ -0.38
GTF3C2-206ENST00000454704 TPM2P07951 284 aa12.68□□□□□ -0.38
GTF3C2-206ENST00000454704 ADRA2BP18089 450 aa12.68□□□□□ -0.38
GTF3C2-206ENST00000454704 EIF2S2P20042 333 aaKnown RBP12.68□□□□□ -0.38
GTF3C2-206ENST00000454704 OS9Q13438 667 aaPredicted RBP12.68□□□□□ -0.38
GTF3C2-206ENST00000454704 IFFO2Q5TF58 517 aa12.68□□□□□ -0.38
GTF3C2-206ENST00000454704 VPS53Q5VIR6 699 aa12.68□□□□□ -0.38
GTF3C2-206ENST00000454704 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.68□□□□□ -0.38
GTF3C2-206ENST00000454704 NLGN1Q8N2Q7 840 aa12.68□□□□□ -0.38
GTF3C2-206ENST00000454704 NECTIN2Q92692 538 aa12.68□□□□□ -0.38
GTF3C2-206ENST00000454704 C9orf78Q9NZ63 289 aaPredicted RBP12.68□□□□□ -0.38
GTF3C2-206ENST00000454704 SNX14Q9Y5W7 946 aa12.68□□□□□ -0.38
GTF3C2-206ENST00000454704 NBPF7P0C2Y1 421 aaPredicted RBP12.67□□□□□ -0.38
GTF3C2-206ENST00000454704 GYS1P13807 737 aa12.67□□□□□ -0.38
GTF3C2-206ENST00000454704 DPEP1P16444 411 aa12.67□□□□□ -0.38
GTF3C2-206ENST00000454704 RFC4P35249 363 aa12.67□□□□□ -0.38
GTF3C2-206ENST00000454704 CABP4P57796 275 aa12.67□□□□□ -0.38
GTF3C2-206ENST00000454704 TGFB2P61812 414 aa12.67□□□□□ -0.38
GTF3C2-206ENST00000454704 RC3H1Q5TC82 1133 aaKnown RBP12.67□□□□□ -0.38
GTF3C2-206ENST00000454704 NUTM1Q86Y26 1132 aa12.67□□□□□ -0.38
GTF3C2-206ENST00000454704 ALDH8A1Q9H2A2 487 aaPredicted RBP12.67□□□□□ -0.38
GTF3C2-206ENST00000454704 LGR6Q9HBX8 967 aa12.67□□□□□ -0.38
GTF3C2-206ENST00000454704 CCDC87Q9NVE4 849 aa12.67□□□□□ -0.38
GTF3C2-206ENST00000454704 TJP1Q07157 1748 aa12.66□□□□□ -0.38
GTF3C2-206ENST00000454704 ARFGEF2Q9Y6D5 1785 aa12.66□□□□□ -0.38
GTF3C2-206ENST00000454704 RPAP1Q9BWH6 1393 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms