RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 MSNP26038 577 aaKnown RBP16.07■□□□□ 0.16
LINC00343-203ENST00000454555 ZSCAN23Q3MJ62 389 aa16.07■□□□□ 0.16
LINC00343-203ENST00000454555 RIC3Q7Z5B4 369 aa16.07■□□□□ 0.16
LINC00343-203ENST00000454555 COL23A1Q86Y22 540 aaPredicted RBP16.07■□□□□ 0.16
LINC00343-203ENST00000454555 KLHL34Q8N239 644 aa16.07■□□□□ 0.16
LINC00343-203ENST00000454555 USP42Q9H9J4 1324 aaKnown RBP16.06■□□□□ 0.16
LINC00343-203ENST00000454555 SOCS7O14512 581 aa16.06■□□□□ 0.16
LINC00343-203ENST00000454555 GNAI2P04899 355 aa16.06■□□□□ 0.16
LINC00343-203ENST00000454555 MCM5P33992 734 aa16.06■□□□□ 0.16
LINC00343-203ENST00000454555 PDE1AP54750 535 aa16.06■□□□□ 0.16
LINC00343-203ENST00000454555 CLEC4GQ6UXB4 293 aa16.06■□□□□ 0.16
LINC00343-203ENST00000454555 GIGYF2Q6Y7W6 1299 aaKnown RBP16.06■□□□□ 0.16
LINC00343-203ENST00000454555 MEIS3Q99687 375 aa16.06■□□□□ 0.16
LINC00343-203ENST00000454555 ZBTB3Q9H5J0 574 aa16.06■□□□□ 0.16
LINC00343-203ENST00000454555 MAP3K2Q9Y2U5 619 aa16.06■□□□□ 0.16
LINC00343-203ENST00000454555 ZPR1O75312 459 aa16.05■□□□□ 0.16
LINC00343-203ENST00000454555 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.05■□□□□ 0.16
LINC00343-203ENST00000454555 C16orf71Q8IYS4 520 aaPredicted RBP16.05■□□□□ 0.16
LINC00343-203ENST00000454555 DNAAF4Q8WXU2 420 aa16.05■□□□□ 0.16
LINC00343-203ENST00000454555 PDLIM2Q96JY6 352 aa16.05■□□□□ 0.16
LINC00343-203ENST00000454555 QSER1Q2KHR3 1735 aa16.05■□□□□ 0.16
LINC00343-203ENST00000454555 HLFQ16534 295 aa16.05■□□□□ 0.16
LINC00343-203ENST00000454555 USPL1Q5W0Q7 1092 aa16.05■□□□□ 0.16
LINC00343-203ENST00000454555 METTL22Q9BUU2 404 aaPredicted RBP16.05■□□□□ 0.16
LINC00343-203ENST00000454555 BCL2L12Q9HB09 334 aa16.05■□□□□ 0.16
LINC00343-203ENST00000454555 SALL3Q9BXA9 1300 aa16.04■□□□□ 0.16
LINC00343-203ENST00000454555 F6X3S4 739 aa16.04■□□□□ 0.16
LINC00343-203ENST00000454555 CUL4AQ13619 759 aa16.04■□□□□ 0.16
LINC00343-203ENST00000454555 HSP90AB3PQ58FF7 597 aa16.04■□□□□ 0.16
LINC00343-203ENST00000454555 SRP68Q9UHB9 627 aaKnown RBP16.04■□□□□ 0.16
LINC00343-203ENST00000454555 ZNF652Q9Y2D9 606 aa16.04■□□□□ 0.16
LINC00343-203ENST00000454555 AK9Q5TCS8 1911 aa16.03■□□□□ 0.16
LINC00343-203ENST00000454555 TCIRG1Q13488 830 aa16.03■□□□□ 0.16
LINC00343-203ENST00000454555 CAVIN1Q6NZI2 390 aaKnown RBP16.03■□□□□ 0.16
LINC00343-203ENST00000454555 SYAP1Q96A49 352 aaPredicted RBP16.03■□□□□ 0.16
LINC00343-203ENST00000454555 LRRCC1Q9C099 1032 aa16.03■□□□□ 0.16
LINC00343-203ENST00000454555 STAP2Q9UGK3 403 aa16.03■□□□□ 0.16
LINC00343-203ENST00000454555 C4AP0C0L4 1744 aa16.02■□□□□ 0.16
LINC00343-203ENST00000454555 OFD1O75665 1012 aa16.02■□□□□ 0.15
LINC00343-203ENST00000454555 GYS1P13807 737 aa16.02■□□□□ 0.15
LINC00343-203ENST00000454555 NEXNQ0ZGT2 675 aa16.02■□□□□ 0.15
LINC00343-203ENST00000454555 TRIM28Q13263 835 aaKnown RBP16.02■□□□□ 0.15
LINC00343-203ENST00000454555 HSP90AA2PQ14568 343 aaPredicted RBP16.02■□□□□ 0.15
LINC00343-203ENST00000454555 BEND3Q5T5X7 828 aa16.02■□□□□ 0.15
LINC00343-203ENST00000454555 LRSAM1Q6UWE0 723 aa16.02■□□□□ 0.15
LINC00343-203ENST00000454555 OTUD7AQ8TE49 926 aaPredicted RBP16.02■□□□□ 0.15
LINC00343-203ENST00000454555 ESYT1Q9BSJ8 1104 aa16.02■□□□□ 0.15
LINC00343-203ENST00000454555 ZNF34Q8IZ26 560 aa16.01■□□□□ 0.15
LINC00343-203ENST00000454555 LINS1Q8NG48 757 aa16.01■□□□□ 0.15
LINC00343-203ENST00000454555 SLC16A10Q8TF71 515 aa16.01■□□□□ 0.15
LINC00343-203ENST00000454555 MYD88Q99836 296 aa16.01■□□□□ 0.15
LINC00343-203ENST00000454555 ISCA1Q9BUE6 129 aa16.01■□□□□ 0.15
LINC00343-203ENST00000454555 NOL7Q9UMY1 257 aaKnown RBP16.01■□□□□ 0.15
LINC00343-203ENST00000454555 BCORQ6W2J9 1755 aa16.01■□□□□ 0.15
LINC00343-203ENST00000454555 SCN7AQ01118 1682 aa16.01■□□□□ 0.15
LINC00343-203ENST00000454555 ZNF500O60304 480 aaPredicted RBP16■□□□□ 0.15
LINC00343-203ENST00000454555 SLC4A10Q6U841 1118 aa16■□□□□ 0.15
LINC00343-203ENST00000454555 NLGN1Q8N2Q7 840 aa16■□□□□ 0.15
LINC00343-203ENST00000454555 SMARCA5O60264 1052 aaPredicted RBP16■□□□□ 0.15
LINC00343-203ENST00000454555 ALDH1L1O75891 902 aa16■□□□□ 0.15
LINC00343-203ENST00000454555 BRD1O95696 1058 aa16■□□□□ 0.15
LINC00343-203ENST00000454555 IGKV5-2P06315 115 aa16■□□□□ 0.15
LINC00343-203ENST00000454555 NCLP19338 710 aaKnown RBP16■□□□□ 0.15
LINC00343-203ENST00000454555 ATP8B2P98198 1209 aa16■□□□□ 0.15
LINC00343-203ENST00000454555 R3HDM1Q15032 1099 aaKnown RBP16■□□□□ 0.15
LINC00343-203ENST00000454555 CSPP1Q1MSJ5 1256 aa16■□□□□ 0.15
LINC00343-203ENST00000454555 ARFGEF2Q9Y6D5 1785 aa16■□□□□ 0.15
LINC00343-203ENST00000454555 PRPF40AO75400 957 aaKnown RBP15.99■□□□□ 0.15
LINC00343-203ENST00000454555 MX1P20591 662 aa15.99■□□□□ 0.15
LINC00343-203ENST00000454555 TMX3Q96JJ7 454 aa15.99■□□□□ 0.15
LINC00343-203ENST00000454555 ZDHHC9Q9Y397 364 aa15.99■□□□□ 0.15
LINC00343-203ENST00000454555 NEURL1BA8MQ27 555 aa15.98■□□□□ 0.15
LINC00343-203ENST00000454555 NEK4P51957 841 aa15.98■□□□□ 0.15
LINC00343-203ENST00000454555 PARP10Q53GL7 1025 aa15.98■□□□□ 0.15
LINC00343-203ENST00000454555 TBC1D9BQ66K14 1250 aa15.98■□□□□ 0.15
LINC00343-203ENST00000454555 ZGPATQ8N5A5 531 aaKnown RBP15.98■□□□□ 0.15
LINC00343-203ENST00000454555 CCDC191Q8NCU4 936 aa15.98■□□□□ 0.15
LINC00343-203ENST00000454555 ATP5J2-PTCD1G3V325 749 aa15.98■□□□□ 0.15
LINC00343-203ENST00000454555 RAB11FIP3O75154 756 aa15.98■□□□□ 0.15
LINC00343-203ENST00000454555 TM4SF1P30408 202 aa15.98■□□□□ 0.15
LINC00343-203ENST00000454555 GPT2Q8TD30 523 aa15.98■□□□□ 0.15
LINC00343-203ENST00000454555 PDGFDQ9GZP0 370 aaPredicted RBP15.98■□□□□ 0.15
LINC00343-203ENST00000454555 CCDC39Q9UFE4 941 aa15.98■□□□□ 0.15
LINC00343-203ENST00000454555 NIP7Q9Y221 180 aaKnown RBP eCLIP15.98■□□□□ 0.15
LINC00343-203ENST00000454555 NUP98P52948 1817 aa15.97■□□□□ 0.15
LINC00343-203ENST00000454555 CWF19L2Q2TBE0 894 aaKnown RBP15.97■□□□□ 0.15
LINC00343-203ENST00000454555 NLRP10Q86W26 655 aa15.97■□□□□ 0.15
LINC00343-203ENST00000454555 CHMLP26374 656 aa15.96■□□□□ 0.15
LINC00343-203ENST00000454555 PKP1Q13835 747 aa15.96■□□□□ 0.15
LINC00343-203ENST00000454555 GCKRQ14397 625 aa15.96■□□□□ 0.15
LINC00343-203ENST00000454555 NFIXQ14938 502 aa15.96■□□□□ 0.15
LINC00343-203ENST00000454555 SETDB2Q96T68 719 aa15.96■□□□□ 0.15
LINC00343-203ENST00000454555 RBSNQ9H1K0 784 aa15.96■□□□□ 0.15
LINC00343-203ENST00000454555 CWC25Q9NXE8 425 aaPredicted RBP15.96■□□□□ 0.15
LINC00343-203ENST00000454555 UBN2Q6ZU65 1347 aa15.96■□□□□ 0.15
LINC00343-203ENST00000454555 GPTP24298 496 aa15.95■□□□□ 0.14
LINC00343-203ENST00000454555 FAM184AQ8NB25 1140 aa15.95■□□□□ 0.14
LINC00343-203ENST00000454555 PSDA5PKW4 1024 aaPredicted RBP15.95■□□□□ 0.14
LINC00343-203ENST00000454555 KIAA1211Q6ZU35 1233 aa15.95■□□□□ 0.14
LINC00343-203ENST00000454555 MAP7D2Q96T17 732 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms