RNA–Protein interactions for RNA: ENST00000453634.5

CHKB-CPT1B-202, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHKB-CPT1B, Length 2,816 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-202ENST00000453634 HMG20BQ9P0W2 317 aa13.14□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 JCADQ9P266 1359 aa13.14□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 DHX8Q14562 1220 aaKnown RBP13.14□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 CCDC93Q567U6 631 aa13.13□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 DHX40Q8IX18 779 aaKnown RBP13.13□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 IL17REQ8NFR9 667 aa13.13□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 IFIT2P09913 472 aaKnown RBP13.13□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 OS9Q13438 667 aaPredicted RBP13.13□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 NOL10Q9BSC4 688 aaKnown RBP13.13□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 PSDA5PKW4 1024 aaPredicted RBP13.12□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 HOXB7P09629 217 aa13.12□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 DDX54Q8TDD1 881 aaKnown RBP13.12□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 DNAAF4Q8WXU2 420 aa13.12□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 DNAJC2Q99543 621 aaKnown RBP13.12□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 ANO10Q9NW15 660 aa13.12□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.12□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 V9GYY5 206 aaPredicted RBP13.12□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 BECN2A8MW95 431 aa13.12□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 NMIQ13287 307 aaPredicted RBP13.12□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 PTPRUQ92729 1446 aa13.12□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 RCOR1Q9UKL0 485 aa13.12□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 USP16Q9Y5T5 823 aa13.12□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 FHOD1Q9Y613 1164 aa13.12□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 MED23Q9ULK4 1368 aa13.12□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 ATL3Q6DD88 541 aa13.12□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 GTF3C6Q969F1 213 aa13.12□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 FAM227BQ96M60 508 aa13.12□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 TSPYL1Q9H0U9 437 aa13.12□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 SNW1Q13573 536 aaKnown RBP13.11□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 COL9A3Q14050 684 aaPredicted RBP13.11□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 TRMT1Q9NXH9 659 aaKnown RBP13.11□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 HDAC5Q9UQL6 1122 aa13.11□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 MYH15Q9Y2K3 1946 aa13.11□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 CDK11BP21127 795 aaKnown RBP13.11□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 ADD1P35611 737 aaKnown RBP13.11□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 KRT32Q14532 448 aa13.11□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 FILIP1Q7Z7B0 1213 aa13.11□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 NAT10Q9H0A0 1025 aaKnown RBP13.11□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 USPL1Q5W0Q7 1092 aa13.1□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 CEP57L1Q8IYX8 460 aa13.1□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 BRF1Q92994 677 aa13.1□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 ZBTB22O15209 634 aa13.1□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 E4F1Q66K89 784 aaPredicted RBP13.1□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 CCAR1Q8IX12 1150 aaKnown RBP13.1□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 CCDC150Q8NCX0 1101 aa13.1□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 ENGASEQ8NFI3 743 aa13.1□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 AGLP35573 1532 aa13.1□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.09□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 NAA16Q6N069 864 aaPredicted RBP13.09□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 NBPF11Q86T75 865 aa13.09□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 LLPHQ9BRT6 129 aaKnown RBP13.09□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 NWD1Q149M9 1564 aa13.09□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 PI4KAP2A4QPH2 592 aa13.09□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 PNMA6AP0CW24 399 aaPredicted RBP13.09□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 FAM160A1Q05DH4 1040 aa13.09□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 ERCC6LQ2NKX8 1250 aa13.09□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 CCDC73Q6ZRK6 1079 aa13.09□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 PI4KAP1Q8N8J0 262 aa13.09□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 PPP1R13BQ96KQ4 1090 aa13.09□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 BPIFA3Q9BQP9 254 aa13.09□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 ST7Q9NRC1 585 aa13.09□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.09□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 ROBO2Q9HCK4 1378 aa13.09□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 H3BQV1 296 aa13.08□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 ATP8B1O43520 1251 aa13.08□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 ALDH1L1O75891 902 aa13.08□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 ZRANB2O95218 330 aaKnown RBP eCLIP13.08□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 CLCN6P51797 869 aa13.08□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 IFFO2Q5TF58 517 aa13.08□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 AACSQ86V21 672 aa13.08□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 SMARCC2Q8TAQ2 1214 aa13.08□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.08□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 DIP2AQ14689 1571 aa13.08□□□□□ -0.31
CHKB-CPT1B-202ENST00000453634 A0A0D9SFI3 127 aa13.08□□□□□ -0.32
CHKB-CPT1B-202ENST00000453634 ERICH4A6NGS2 130 aa13.08□□□□□ -0.32
CHKB-CPT1B-202ENST00000453634 JAK2O60674 1132 aa13.08□□□□□ -0.32
CHKB-CPT1B-202ENST00000453634 KINO60870 393 aaKnown RBP13.08□□□□□ -0.32
CHKB-CPT1B-202ENST00000453634 AMPHP49418 695 aa13.08□□□□□ -0.32
CHKB-CPT1B-202ENST00000453634 HDGFP51858 240 aaKnown RBP13.08□□□□□ -0.32
CHKB-CPT1B-202ENST00000453634 TCEANC2Q96MN5 208 aa13.08□□□□□ -0.32
CHKB-CPT1B-202ENST00000453634 GOLPH3LQ9H4A5 285 aa13.08□□□□□ -0.32
CHKB-CPT1B-202ENST00000453634 STK3Q13188 491 aa13.08□□□□□ -0.32
CHKB-CPT1B-202ENST00000453634 CEMIPQ8WUJ3 1361 aa13.07□□□□□ -0.32
CHKB-CPT1B-202ENST00000453634 MED1Q15648 1581 aaPredicted RBP13.07□□□□□ -0.32
CHKB-CPT1B-202ENST00000453634 CCP110O43303 1012 aa13.07□□□□□ -0.32
CHKB-CPT1B-202ENST00000453634 PLA2G4AP47712 749 aa13.07□□□□□ -0.32
CHKB-CPT1B-202ENST00000453634 IPO4Q8TEX9 1081 aaKnown RBP13.07□□□□□ -0.32
CHKB-CPT1B-202ENST00000453634 ARGLU1Q9NWB6 273 aaPredicted RBP13.07□□□□□ -0.32
CHKB-CPT1B-202ENST00000453634 TAF6LQ9Y6J9 622 aa13.07□□□□□ -0.32
CHKB-CPT1B-202ENST00000453634 PHLPP2Q6ZVD8 1323 aa13.07□□□□□ -0.32
CHKB-CPT1B-202ENST00000453634 EIF4A1P60842 406 aaKnown RBP13.07□□□□□ -0.32
CHKB-CPT1B-202ENST00000453634 TEX35Q5T0J7 233 aa13.07□□□□□ -0.32
CHKB-CPT1B-202ENST00000453634 AOPEPQ8N6M6 819 aa13.07□□□□□ -0.32
CHKB-CPT1B-202ENST00000453634 SRRTQ9BXP5 876 aaKnown RBP13.07□□□□□ -0.32
CHKB-CPT1B-202ENST00000453634 NRDCO43847 1150 aa13.06□□□□□ -0.32
CHKB-CPT1B-202ENST00000453634 TAF5LO75529 589 aa13.06□□□□□ -0.32
CHKB-CPT1B-202ENST00000453634 TPM1P09493 284 aa13.06□□□□□ -0.32
CHKB-CPT1B-202ENST00000453634 CAPN2P17655 700 aa13.06□□□□□ -0.32
CHKB-CPT1B-202ENST00000453634 HNRNPH2P55795 449 aaKnown RBP13.06□□□□□ -0.32
CHKB-CPT1B-202ENST00000453634 SYT10Q6XYQ8 523 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms