RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 C3orf67Q6ZVT6 689 aa12.21□□□□□ -0.45
CDC42EP3-203ENST00000453555 NLRP10Q86W26 655 aa12.21□□□□□ -0.45
CDC42EP3-203ENST00000453555 SYNE4Q8N205 404 aa12.21□□□□□ -0.45
CDC42EP3-203ENST00000453555 RPGRQ92834 1020 aaKnown RBP12.21□□□□□ -0.45
CDC42EP3-203ENST00000453555 ALDH1B1P30837 517 aa12.2□□□□□ -0.46
CDC42EP3-203ENST00000453555 GSE1Q14687 1217 aa12.2□□□□□ -0.46
CDC42EP3-203ENST00000453555 TWISTNBQ3B726 338 aaPredicted RBP12.2□□□□□ -0.46
CDC42EP3-203ENST00000453555 CRY2Q49AN0 593 aa12.2□□□□□ -0.46
CDC42EP3-203ENST00000453555 CCDC30Q5VVM6 783 aa12.2□□□□□ -0.46
CDC42EP3-203ENST00000453555 RIC3Q7Z5B4 369 aa12.2□□□□□ -0.46
CDC42EP3-203ENST00000453555 WDR63Q8IWG1 891 aa12.2□□□□□ -0.46
CDC42EP3-203ENST00000453555 TRMT112Q9UI30 125 aaKnown RBP12.2□□□□□ -0.46
CDC42EP3-203ENST00000453555 RIC1Q4ADV7 1423 aa12.2□□□□□ -0.46
CDC42EP3-203ENST00000453555 CACNA1FO60840 1977 aa12.19□□□□□ -0.46
CDC42EP3-203ENST00000453555 POTEFA5A3E0 1075 aa12.19□□□□□ -0.46
CDC42EP3-203ENST00000453555 HCLS1P14317 486 aaPredicted RBP12.19□□□□□ -0.46
CDC42EP3-203ENST00000453555 GOLGA2Q08379 1002 aa12.19□□□□□ -0.46
CDC42EP3-203ENST00000453555 SOGA3Q5TF21 947 aa12.19□□□□□ -0.46
CDC42EP3-203ENST00000453555 C7orf43Q8WVR3 580 aa12.19□□□□□ -0.46
CDC42EP3-203ENST00000453555 RBM17Q96I25 401 aaKnown RBP12.19□□□□□ -0.46
CDC42EP3-203ENST00000453555 NLRP3Q96P20 1036 aa12.19□□□□□ -0.46
CDC42EP3-203ENST00000453555 TAOK3Q9H2K8 898 aa12.19□□□□□ -0.46
CDC42EP3-203ENST00000453555 NMRK2Q9NPI5 230 aa12.19□□□□□ -0.46
CDC42EP3-203ENST00000453555 FANCIQ9NVI1 1328 aa12.18□□□□□ -0.46
CDC42EP3-203ENST00000453555 KIF3CO14782 793 aa12.18□□□□□ -0.46
CDC42EP3-203ENST00000453555 POTEJP0CG39 1038 aa12.18□□□□□ -0.46
CDC42EP3-203ENST00000453555 CCDC93Q567U6 631 aa12.18□□□□□ -0.46
CDC42EP3-203ENST00000453555 RTL5Q5HYW3 569 aaPredicted RBP12.18□□□□□ -0.46
CDC42EP3-203ENST00000453555 SLC10A5Q5PT55 438 aa12.18□□□□□ -0.46
CDC42EP3-203ENST00000453555 ISCA1Q9BUE6 129 aa12.18□□□□□ -0.46
CDC42EP3-203ENST00000453555 RNF123Q5XPI4 1314 aa12.17□□□□□ -0.46
CDC42EP3-203ENST00000453555 SH3TC1Q8TE82 1336 aa12.17□□□□□ -0.46
CDC42EP3-203ENST00000453555 HOXA10P31260 410 aaPredicted RBP12.17□□□□□ -0.46
CDC42EP3-203ENST00000453555 EXOSC9Q06265 439 aaKnown RBP12.17□□□□□ -0.46
CDC42EP3-203ENST00000453555 SLC51AQ86UW1 340 aa12.17□□□□□ -0.46
CDC42EP3-203ENST00000453555 SPOCK2Q92563 424 aa12.17□□□□□ -0.46
CDC42EP3-203ENST00000453555 FAM89AQ96GI7 184 aa12.17□□□□□ -0.46
CDC42EP3-203ENST00000453555 MYD88Q99836 296 aa12.17□□□□□ -0.46
CDC42EP3-203ENST00000453555 TMEM106CQ9BVX2 250 aa12.17□□□□□ -0.46
CDC42EP3-203ENST00000453555 STK31Q9BXU1 1019 aa12.17□□□□□ -0.46
CDC42EP3-203ENST00000453555 CHMP4AQ9BY43 222 aa12.17□□□□□ -0.46
CDC42EP3-203ENST00000453555 RRAGCQ9HB90 399 aa12.17□□□□□ -0.46
CDC42EP3-203ENST00000453555 KDM2BQ8NHM5 1336 aa12.16□□□□□ -0.46
CDC42EP3-203ENST00000453555 LTBP3Q9NS15 1303 aa12.16□□□□□ -0.46
CDC42EP3-203ENST00000453555 PPEF1O14829 653 aaPredicted RBP12.16□□□□□ -0.46
CDC42EP3-203ENST00000453555 CRAMP1Q96RY5 1269 aa12.16□□□□□ -0.46
CDC42EP3-203ENST00000453555 PCDHB8Q9UN66 801 aa12.16□□□□□ -0.46
CDC42EP3-203ENST00000453555 DDX58O95786 925 aaKnown RBP12.15□□□□□ -0.46
CDC42EP3-203ENST00000453555 FKBP4Q02790 459 aaKnown RBP eCLIP12.15□□□□□ -0.46
CDC42EP3-203ENST00000453555 G2E3Q7L622 706 aa12.15□□□□□ -0.46
CDC42EP3-203ENST00000453555 RTKN2Q8IZC4 609 aa12.15□□□□□ -0.46
CDC42EP3-203ENST00000453555 ZNF277Q9NRM2 450 aaPredicted RBP12.15□□□□□ -0.46
CDC42EP3-203ENST00000453555 MAP3K2Q9Y2U5 619 aa12.15□□□□□ -0.46
CDC42EP3-203ENST00000453555 ABCC4O15439 1325 aa12.14□□□□□ -0.47
CDC42EP3-203ENST00000453555 ZC3H4Q9UPT8 1303 aaKnown RBP12.14□□□□□ -0.47
CDC42EP3-203ENST00000453555 PI4KAP2A4QPH2 592 aa12.14□□□□□ -0.47
CDC42EP3-203ENST00000453555 GLTPD2A6NH11 291 aa12.14□□□□□ -0.47
CDC42EP3-203ENST00000453555 VAMP4O75379 141 aa12.14□□□□□ -0.47
CDC42EP3-203ENST00000453555 PI4KAP1Q8N8J0 262 aa12.14□□□□□ -0.47
CDC42EP3-203ENST00000453555 JARID2Q92833 1246 aaPredicted RBP12.14□□□□□ -0.47
CDC42EP3-203ENST00000453555 METTL22Q9BUU2 404 aaPredicted RBP12.14□□□□□ -0.47
CDC42EP3-203ENST00000453555 MYH3P11055 1940 aa12.13□□□□□ -0.47
CDC42EP3-203ENST00000453555 TRIM28Q13263 835 aaKnown RBP12.13□□□□□ -0.47
CDC42EP3-203ENST00000453555 DPY19L2Q6NUT2 758 aa12.13□□□□□ -0.47
CDC42EP3-203ENST00000453555 KSR2Q6VAB6 950 aa12.13□□□□□ -0.47
CDC42EP3-203ENST00000453555 DDX46Q7L014 1031 aaKnown RBP12.13□□□□□ -0.47
CDC42EP3-203ENST00000453555 C16orf71Q8IYS4 520 aaPredicted RBP12.13□□□□□ -0.47
CDC42EP3-203ENST00000453555 MYH16Q9H6N6 1097 aa12.13□□□□□ -0.47
CDC42EP3-203ENST00000453555 COLQQ9Y215 455 aaPredicted RBP12.13□□□□□ -0.47
CDC42EP3-203ENST00000453555 WDR90Q96KV7 1748 aa12.12□□□□□ -0.47
CDC42EP3-203ENST00000453555 SPEF2Q9C093 1822 aa12.12□□□□□ -0.47
CDC42EP3-203ENST00000453555 IRS4O14654 1257 aaPredicted RBP12.12□□□□□ -0.47
CDC42EP3-203ENST00000453555 IARSP41252 1262 aaKnown RBP12.12□□□□□ -0.47
CDC42EP3-203ENST00000453555 CC2D2BQ6DHV5 1058 aa12.12□□□□□ -0.47
CDC42EP3-203ENST00000453555 CCDC191Q8NCU4 936 aa12.12□□□□□ -0.47
CDC42EP3-203ENST00000453555 TMX4Q9H1E5 349 aaPredicted RBP12.12□□□□□ -0.47
CDC42EP3-203ENST00000453555 CWC25Q9NXE8 425 aaPredicted RBP12.12□□□□□ -0.47
CDC42EP3-203ENST00000453555 COL4A1P02462 1669 aa12.12□□□□□ -0.47
CDC42EP3-203ENST00000453555 SNED1Q8TER0 1413 aa12.11□□□□□ -0.47
CDC42EP3-203ENST00000453555 CCER2I3L3R5 266 aa12.11□□□□□ -0.47
CDC42EP3-203ENST00000453555 TOMM70O94826 608 aa12.11□□□□□ -0.47
CDC42EP3-203ENST00000453555 DDNO94850 711 aaPredicted RBP12.11□□□□□ -0.47
CDC42EP3-203ENST00000453555 FLIIQ13045 1269 aa12.11□□□□□ -0.47
CDC42EP3-203ENST00000453555 GRAPQ13588 217 aa12.11□□□□□ -0.47
CDC42EP3-203ENST00000453555 ZBTB38Q8NAP3 1195 aaPredicted RBP12.11□□□□□ -0.47
CDC42EP3-203ENST00000453555 GRAPLQ8TC17 118 aaPredicted RBP12.11□□□□□ -0.47
CDC42EP3-203ENST00000453555 PSMD1Q99460 953 aa12.11□□□□□ -0.47
CDC42EP3-203ENST00000453555 ATP6V0A2Q9Y487 856 aa12.11□□□□□ -0.47
CDC42EP3-203ENST00000453555 ZNF521Q96K83 1311 aa12.11□□□□□ -0.47
CDC42EP3-203ENST00000453555 BBOX1O75936 387 aa12.1□□□□□ -0.47
CDC42EP3-203ENST00000453555 SEC24BO95487 1268 aa12.1□□□□□ -0.47
CDC42EP3-203ENST00000453555 PCCAP05165 728 aaPredicted RBP12.1□□□□□ -0.47
CDC42EP3-203ENST00000453555 IGKV5-2P06315 115 aa12.1□□□□□ -0.47
CDC42EP3-203ENST00000453555 VEGFAP15692 232 aaPredicted RBP12.1□□□□□ -0.47
CDC42EP3-203ENST00000453555 NEXNQ0ZGT2 675 aa12.1□□□□□ -0.47
CDC42EP3-203ENST00000453555 FKBP5Q13451 457 aaPredicted RBP12.1□□□□□ -0.47
CDC42EP3-203ENST00000453555 SF3B3Q15393 1217 aaKnown RBP12.1□□□□□ -0.47
CDC42EP3-203ENST00000453555 CWF19L2Q2TBE0 894 aaKnown RBP12.1□□□□□ -0.47
CDC42EP3-203ENST00000453555 IER5LQ5T953 404 aa12.1□□□□□ -0.47
CDC42EP3-203ENST00000453555 CIZ1Q9ULV3 898 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms