RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 SHTN1A0MZ66 631 aa28.81■■■□□ 2.2
TNFRSF25-208ENST00000453341 RAD17O75943 681 aa28.81■■■□□ 2.2
TNFRSF25-208ENST00000453341 PARP10Q53GL7 1025 aa28.81■■■□□ 2.2
TNFRSF25-208ENST00000453341 ZC3H15Q8WU90 426 aaKnown RBP28.81■■■□□ 2.2
TNFRSF25-208ENST00000453341 KIAA2012Q0VF49 1180 aa28.8■■■□□ 2.2
TNFRSF25-208ENST00000453341 DGKZQ13574 1117 aa28.8■■■□□ 2.2
TNFRSF25-208ENST00000453341 DPP8Q6V1X1 898 aaPredicted RBP28.8■■■□□ 2.2
TNFRSF25-208ENST00000453341 UTP14AQ9BVJ6 771 aaKnown RBP28.79■■■□□ 2.2
TNFRSF25-208ENST00000453341 ERBB4Q15303 1308 aa28.78■■■□□ 2.2
TNFRSF25-208ENST00000453341 DLK2Q6UY11 383 aa28.78■■■□□ 2.2
TNFRSF25-208ENST00000453341 CDC37L1Q7L3B6 337 aa28.78■■■□□ 2.2
TNFRSF25-208ENST00000453341 BCL2L13Q9BXK5 485 aa28.78■■■□□ 2.2
TNFRSF25-208ENST00000453341 ANKRD36CQ5JPF3 1778 aa28.78■■■□□ 2.2
TNFRSF25-208ENST00000453341 YDJCA8MPS7 323 aa28.77■■■□□ 2.2
TNFRSF25-208ENST00000453341 PDIA6Q15084 440 aa28.77■■■□□ 2.2
TNFRSF25-208ENST00000453341 SP8Q8IXZ3 490 aa28.77■■■□□ 2.2
TNFRSF25-208ENST00000453341 MPNDQ8N594 471 aa28.77■■■□□ 2.2
TNFRSF25-208ENST00000453341 TAF1P21675 1872 aa28.76■■■□□ 2.2
TNFRSF25-208ENST00000453341 TNIP1Q15025 636 aa28.76■■■□□ 2.19
TNFRSF25-208ENST00000453341 PLEKHF1Q96S99 279 aa28.76■■■□□ 2.19
TNFRSF25-208ENST00000453341 DUOX1Q9NRD9 1551 aa28.75■■■□□ 2.19
TNFRSF25-208ENST00000453341 BBOX1O75936 387 aa28.75■■■□□ 2.19
TNFRSF25-208ENST00000453341 NOGQ13253 232 aa28.75■■■□□ 2.19
TNFRSF25-208ENST00000453341 PROSER3Q2NL68 480 aa28.75■■■□□ 2.19
TNFRSF25-208ENST00000453341 CNOT7Q9UIV1 285 aaKnown RBP28.75■■■□□ 2.19
TNFRSF25-208ENST00000453341 HCLS1P14317 486 aaPredicted RBP28.74■■■□□ 2.19
TNFRSF25-208ENST00000453341 USP48Q86UV5 1035 aa28.74■■■□□ 2.19
TNFRSF25-208ENST00000453341 PCDH10Q9P2E7 1040 aa28.74■■■□□ 2.19
TNFRSF25-208ENST00000453341 ANXA1P04083 346 aa28.73■■■□□ 2.19
TNFRSF25-208ENST00000453341 HUNKP57058 714 aa28.73■■■□□ 2.19
TNFRSF25-208ENST00000453341 NFE2L2Q16236 605 aa28.73■■■□□ 2.19
TNFRSF25-208ENST00000453341 MICALL2Q8IY33 904 aa28.72■■■□□ 2.19
TNFRSF25-208ENST00000453341 POLR2AP24928 1970 aaKnown RBP28.71■■■□□ 2.19
TNFRSF25-208ENST00000453341 ZBTB12Q9Y330 459 aaPredicted RBP28.71■■■□□ 2.19
TNFRSF25-208ENST00000453341 NEFMP07197 916 aa28.7■■■□□ 2.18
TNFRSF25-208ENST00000453341 GRAPQ13588 217 aa28.7■■■□□ 2.18
TNFRSF25-208ENST00000453341 NLRP10Q86W26 655 aa28.7■■■□□ 2.18
TNFRSF25-208ENST00000453341 GRAPLQ8TC17 118 aaPredicted RBP28.7■■■□□ 2.18
TNFRSF25-208ENST00000453341 LRRC37AA6NMS7 1700 aa28.69■■■□□ 2.18
TNFRSF25-208ENST00000453341 FAM155AB1AL88 458 aaPredicted RBP28.69■■■□□ 2.18
TNFRSF25-208ENST00000453341 H7C1D1 291 aa28.69■■■□□ 2.18
TNFRSF25-208ENST00000453341 EIF2S2P20042 333 aaKnown RBP28.69■■■□□ 2.18
TNFRSF25-208ENST00000453341 EGFRP00533 1210 aa28.68■■■□□ 2.18
TNFRSF25-208ENST00000453341 DDX46Q7L014 1031 aaKnown RBP28.68■■■□□ 2.18
TNFRSF25-208ENST00000453341 SAMD7Q7Z3H4 446 aa28.68■■■□□ 2.18
TNFRSF25-208ENST00000453341 TSPYL4Q9UJ04 414 aa28.67■■■□□ 2.18
TNFRSF25-208ENST00000453341 PSMD14O00487 310 aa28.66■■■□□ 2.18
TNFRSF25-208ENST00000453341 RGMBQ6NW40 437 aa28.66■■■□□ 2.18
TNFRSF25-208ENST00000453341 TBC1D10BQ4KMP7 808 aaPredicted RBP28.65■■■□□ 2.18
TNFRSF25-208ENST00000453341 KRT26Q7Z3Y9 468 aa28.65■■■□□ 2.18
TNFRSF25-208ENST00000453341 DPF2Q92785 391 aa28.65■■■□□ 2.18
TNFRSF25-208ENST00000453341 COPS6Q7L5N1 327 aa28.64■■■□□ 2.18
TNFRSF25-208ENST00000453341 GBA2Q9HCG7 927 aaPredicted RBP28.64■■■□□ 2.18
TNFRSF25-208ENST00000453341 SAGE1Q9NXZ1 904 aa28.64■■■□□ 2.18
TNFRSF25-208ENST00000453341 TRMT112Q9UI30 125 aaKnown RBP28.64■■■□□ 2.18
TNFRSF25-208ENST00000453341 ADM5C9JUS6 153 aa28.63■■■□□ 2.17
TNFRSF25-208ENST00000453341 KIF23Q02241 960 aaPredicted RBP28.63■■■□□ 2.17
TNFRSF25-208ENST00000453341 AIMP1Q12904 312 aaKnown RBP28.63■■■□□ 2.17
TNFRSF25-208ENST00000453341 HSP90AB3PQ58FF7 597 aa28.63■■■□□ 2.17
TNFRSF25-208ENST00000453341 XAGE3Q8WTP9 111 aa28.63■■■□□ 2.17
TNFRSF25-208ENST00000453341 ZNF428Q96B54 188 aa28.63■■■□□ 2.17
TNFRSF25-208ENST00000453341 DBNDD1Q9H9R9 158 aa28.63■■■□□ 2.17
TNFRSF25-208ENST00000453341 SH3TC1Q8TE82 1336 aa28.63■■■□□ 2.17
TNFRSF25-208ENST00000453341 COL4A1P02462 1669 aa28.62■■■□□ 2.17
TNFRSF25-208ENST00000453341 SOX10P56693 466 aa28.62■■■□□ 2.17
TNFRSF25-208ENST00000453341 DDX60Q8IY21 1712 aaKnown RBP28.62■■■□□ 2.17
TNFRSF25-208ENST00000453341 TCIRG1Q13488 830 aa28.61■■■□□ 2.17
TNFRSF25-208ENST00000453341 TMC4Q7Z404 712 aa28.61■■■□□ 2.17
TNFRSF25-208ENST00000453341 NECTIN2Q92692 538 aa28.61■■■□□ 2.17
TNFRSF25-208ENST00000453341 RNF186Q9NXI6 227 aa28.61■■■□□ 2.17
TNFRSF25-208ENST00000453341 WASHC4Q2M389 1173 aa28.6■■■□□ 2.17
TNFRSF25-208ENST00000453341 C2orf69Q8N8R5 385 aa28.6■■■□□ 2.17
TNFRSF25-208ENST00000453341 KCNQ5Q9NR82 932 aa28.6■■■□□ 2.17
TNFRSF25-208ENST00000453341 AKAP11Q9UKA4 1901 aa28.6■■■□□ 2.17
TNFRSF25-208ENST00000453341 RTL9Q8NET4 1388 aa28.6■■■□□ 2.17
TNFRSF25-208ENST00000453341 TRPA1O75762 1119 aa28.59■■■□□ 2.17
TNFRSF25-208ENST00000453341 RBM26Q5T8P6 1007 aaKnown RBP28.59■■■□□ 2.17
TNFRSF25-208ENST00000453341 CCDC102AQ96A19 550 aa28.59■■■□□ 2.17
TNFRSF25-208ENST00000453341 RIMBP2O15034 1052 aa28.58■■■□□ 2.17
TNFRSF25-208ENST00000453341 ZNF157P51786 506 aaPredicted RBP28.58■■■□□ 2.17
TNFRSF25-208ENST00000453341 CELF1Q92879 486 aaKnown RBP28.58■■■□□ 2.17
TNFRSF25-208ENST00000453341 POLLQ9UGP5 575 aa28.58■■■□□ 2.17
TNFRSF25-208ENST00000453341 NSFL1CQ9UNZ2 370 aaKnown RBP28.58■■■□□ 2.17
TNFRSF25-208ENST00000453341 MAPK8IP3Q9UPT6 1336 aa28.58■■■□□ 2.17
TNFRSF25-208ENST00000453341 DCPSQ96C86 337 aaKnown RBP28.57■■■□□ 2.16
TNFRSF25-208ENST00000453341 SCN9AQ15858 1988 aa28.57■■■□□ 2.16
TNFRSF25-208ENST00000453341 SLC10A3P09131 477 aa28.56■■■□□ 2.16
TNFRSF25-208ENST00000453341 RPS12P25398 132 aaKnown RBP28.56■■■□□ 2.16
TNFRSF25-208ENST00000453341 ECE2O60344 883 aa28.55■■■□□ 2.16
TNFRSF25-208ENST00000453341 GPSM2P81274 684 aa28.55■■■□□ 2.16
TNFRSF25-208ENST00000453341 CSRNP1Q96S65 589 aa28.55■■■□□ 2.16
TNFRSF25-208ENST00000453341 ASTN2O75129 1339 aaPredicted RBP28.54■■■□□ 2.16
TNFRSF25-208ENST00000453341 DOK7Q18PE1 504 aa28.54■■■□□ 2.16
TNFRSF25-208ENST00000453341 C6orf229H3BNL8 230 aa28.53■■■□□ 2.16
TNFRSF25-208ENST00000453341 KIF4BQ2VIQ3 1234 aa28.53■■■□□ 2.16
TNFRSF25-208ENST00000453341 BABAM1Q9NWV8 329 aa28.53■■■□□ 2.16
TNFRSF25-208ENST00000453341 GGA3Q9NZ52 723 aa28.53■■■□□ 2.16
TNFRSF25-208ENST00000453341 RIPK4P57078 832 aa28.52■■■□□ 2.16
TNFRSF25-208ENST00000453341 SF3B3Q15393 1217 aaKnown RBP28.52■■■□□ 2.16
TNFRSF25-208ENST00000453341 KRT24Q2M2I5 525 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms