RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 TCERG1O14776 1098 aaKnown RBP18.77■□□□□ 0.6
LYSMD3-202ENST00000453259 CELF2O95319 508 aaKnown RBP18.77■□□□□ 0.6
LYSMD3-202ENST00000453259 DDX46Q7L014 1031 aaKnown RBP18.77■□□□□ 0.6
LYSMD3-202ENST00000453259 CDC37L1Q7L3B6 337 aa18.77■□□□□ 0.6
LYSMD3-202ENST00000453259 SH3TC1Q8TE82 1336 aa18.76■□□□□ 0.59
LYSMD3-202ENST00000453259 SLC34A2O95436 690 aa18.76■□□□□ 0.59
LYSMD3-202ENST00000453259 GRAPQ13588 217 aa18.76■□□□□ 0.59
LYSMD3-202ENST00000453259 GRAPLQ8TC17 118 aaPredicted RBP18.76■□□□□ 0.59
LYSMD3-202ENST00000453259 THUMPD2Q9BTF0 503 aaKnown RBP18.76■□□□□ 0.59
LYSMD3-202ENST00000453259 BCL2L13Q9BXK5 485 aa18.76■□□□□ 0.59
LYSMD3-202ENST00000453259 MLLT1Q03111 559 aaPredicted RBP18.75■□□□□ 0.59
LYSMD3-202ENST00000453259 FMR1Q06787 632 aaKnown RBP eCLIP18.75■□□□□ 0.59
LYSMD3-202ENST00000453259 NOGQ13253 232 aa18.75■□□□□ 0.59
LYSMD3-202ENST00000453259 NLRP10Q86W26 655 aa18.75■□□□□ 0.59
LYSMD3-202ENST00000453259 LRRC37AA6NMS7 1700 aa18.74■□□□□ 0.59
LYSMD3-202ENST00000453259 LAMB2P55268 1798 aa18.74■□□□□ 0.59
LYSMD3-202ENST00000453259 H7C1D1 291 aa18.74■□□□□ 0.59
LYSMD3-202ENST00000453259 GRM1Q13255 1194 aa18.74■□□□□ 0.59
LYSMD3-202ENST00000453259 FAM161AQ3B820 660 aa18.74■□□□□ 0.59
LYSMD3-202ENST00000453259 DPF2Q92785 391 aa18.74■□□□□ 0.59
LYSMD3-202ENST00000453259 TCIRG1Q13488 830 aa18.73■□□□□ 0.59
LYSMD3-202ENST00000453259 GLIS2Q9BZE0 524 aaPredicted RBP18.73■□□□□ 0.59
LYSMD3-202ENST00000453259 TRMT112Q9UI30 125 aaKnown RBP18.73■□□□□ 0.59
LYSMD3-202ENST00000453259 CCDC85CA6NKD9 419 aa18.72■□□□□ 0.59
LYSMD3-202ENST00000453259 EIF2S2P20042 333 aaKnown RBP18.72■□□□□ 0.59
LYSMD3-202ENST00000453259 RPS12P25398 132 aaKnown RBP18.72■□□□□ 0.59
LYSMD3-202ENST00000453259 AOC2O75106 756 aa18.71■□□□□ 0.59
LYSMD3-202ENST00000453259 RIPK4P57078 832 aa18.71■□□□□ 0.59
LYSMD3-202ENST00000453259 COPS6Q7L5N1 327 aa18.71■□□□□ 0.59
LYSMD3-202ENST00000453259 CNOT7Q9UIV1 285 aaKnown RBP18.71■□□□□ 0.59
LYSMD3-202ENST00000453259 DUOX1Q9NRD9 1551 aa18.71■□□□□ 0.59
LYSMD3-202ENST00000453259 RAD17O75943 681 aa18.7■□□□□ 0.58
LYSMD3-202ENST00000453259 HOXB7P09629 217 aa18.7■□□□□ 0.58
LYSMD3-202ENST00000453259 HCLS1P14317 486 aaPredicted RBP18.7■□□□□ 0.58
LYSMD3-202ENST00000453259 HIRAP54198 1017 aaPredicted RBP18.7■□□□□ 0.58
LYSMD3-202ENST00000453259 PROSER3Q2NL68 480 aa18.7■□□□□ 0.58
LYSMD3-202ENST00000453259 SLC51AQ86UW1 340 aa18.7■□□□□ 0.58
LYSMD3-202ENST00000453259 XAGE3Q8WTP9 111 aa18.7■□□□□ 0.58
LYSMD3-202ENST00000453259 SAGE1Q9NXZ1 904 aa18.7■□□□□ 0.58
LYSMD3-202ENST00000453259 MICALL2Q8IY33 904 aa18.69■□□□□ 0.58
LYSMD3-202ENST00000453259 DDX60Q8IY21 1712 aaKnown RBP18.69■□□□□ 0.58
LYSMD3-202ENST00000453259 YDJCA8MPS7 323 aa18.68■□□□□ 0.58
LYSMD3-202ENST00000453259 SF3B3Q15393 1217 aaKnown RBP18.68■□□□□ 0.58
LYSMD3-202ENST00000453259 WASHC4Q2M389 1173 aa18.68■□□□□ 0.58
LYSMD3-202ENST00000453259 TRPM4Q8TD43 1214 aa18.68■□□□□ 0.58
LYSMD3-202ENST00000453259 MCOLN1Q9GZU1 580 aa18.68■□□□□ 0.58
LYSMD3-202ENST00000453259 HSP90B1P14625 803 aaKnown RBP18.67■□□□□ 0.58
LYSMD3-202ENST00000453259 TMPOP42166 694 aaKnown RBP18.67■□□□□ 0.58
LYSMD3-202ENST00000453259 HUNKP57058 714 aa18.67■□□□□ 0.58
LYSMD3-202ENST00000453259 PLBD2Q8NHP8 589 aa18.67■□□□□ 0.58
LYSMD3-202ENST00000453259 CCDC102AQ96A19 550 aa18.67■□□□□ 0.58
LYSMD3-202ENST00000453259 EYA3Q99504 573 aa18.67■□□□□ 0.58
LYSMD3-202ENST00000453259 ZNF408Q9H9D4 720 aa18.67■□□□□ 0.58
LYSMD3-202ENST00000453259 ANXA1P04083 346 aa18.66■□□□□ 0.58
LYSMD3-202ENST00000453259 AIMP1Q12904 312 aaKnown RBP18.66■□□□□ 0.58
LYSMD3-202ENST00000453259 RALBP1Q15311 655 aa18.66■□□□□ 0.58
LYSMD3-202ENST00000453259 ZNF609O15014 1411 aa18.66■□□□□ 0.58
LYSMD3-202ENST00000453259 CHL1O00533 1208 aa18.65■□□□□ 0.58
LYSMD3-202ENST00000453259 KRT26Q7Z3Y9 468 aa18.65■□□□□ 0.58
LYSMD3-202ENST00000453259 REM2Q8IYK8 340 aaPredicted RBP18.65■□□□□ 0.58
LYSMD3-202ENST00000453259 C2orf69Q8N8R5 385 aa18.65■□□□□ 0.58
LYSMD3-202ENST00000453259 DBF4Q9UBU7 674 aaPredicted RBP18.65■□□□□ 0.58
LYSMD3-202ENST00000453259 TSKSQ9UJT2 592 aa18.65■□□□□ 0.58
LYSMD3-202ENST00000453259 PSMD14O00487 310 aa18.64■□□□□ 0.57
LYSMD3-202ENST00000453259 TRIM28Q13263 835 aaKnown RBP18.64■□□□□ 0.57
LYSMD3-202ENST00000453259 RGMBQ6NW40 437 aa18.64■□□□□ 0.57
LYSMD3-202ENST00000453259 ANKRD13DQ6ZTN6 518 aa18.64■□□□□ 0.57
LYSMD3-202ENST00000453259 USP48Q86UV5 1035 aa18.64■□□□□ 0.57
LYSMD3-202ENST00000453259 DCPSQ96C86 337 aaKnown RBP18.64■□□□□ 0.57
LYSMD3-202ENST00000453259 ISCA1Q9BUE6 129 aa18.64■□□□□ 0.57
LYSMD3-202ENST00000453259 GBA2Q9HCG7 927 aaPredicted RBP18.64■□□□□ 0.57
LYSMD3-202ENST00000453259 NSFL1CQ9UNZ2 370 aaKnown RBP18.64■□□□□ 0.57
LYSMD3-202ENST00000453259 DGKZQ13574 1117 aa18.63■□□□□ 0.57
LYSMD3-202ENST00000453259 NECTIN2Q92692 538 aa18.63■□□□□ 0.57
LYSMD3-202ENST00000453259 HYPKQ9NX55 129 aa18.63■□□□□ 0.57
LYSMD3-202ENST00000453259 HDGFL1Q5TGJ6 251 aa18.62■□□□□ 0.57
LYSMD3-202ENST00000453259 PODXL2Q9NZ53 605 aa18.62■□□□□ 0.57
LYSMD3-202ENST00000453259 CHPF2Q9P2E5 772 aa18.62■□□□□ 0.57
LYSMD3-202ENST00000453259 PCDH10Q9P2E7 1040 aa18.62■□□□□ 0.57
LYSMD3-202ENST00000453259 FAM155AB1AL88 458 aaPredicted RBP18.61■□□□□ 0.57
LYSMD3-202ENST00000453259 C6orf229H3BNL8 230 aa18.61■□□□□ 0.57
LYSMD3-202ENST00000453259 ECE2O60344 883 aa18.61■□□□□ 0.57
LYSMD3-202ENST00000453259 SAMD7Q7Z3H4 446 aa18.61■□□□□ 0.57
LYSMD3-202ENST00000453259 ZBTB12Q9Y330 459 aaPredicted RBP18.61■□□□□ 0.57
LYSMD3-202ENST00000453259 FKBP1BP68106 108 aa18.6■□□□□ 0.57
LYSMD3-202ENST00000453259 SULF1Q8IWU6 871 aa18.6■□□□□ 0.57
LYSMD3-202ENST00000453259 CELF1Q92879 486 aaKnown RBP18.6■□□□□ 0.57
LYSMD3-202ENST00000453259 FAM89AQ96GI7 184 aa18.6■□□□□ 0.57
LYSMD3-202ENST00000453259 DBNDD1Q9H9R9 158 aa18.6■□□□□ 0.57
LYSMD3-202ENST00000453259 POLLQ9UGP5 575 aa18.6■□□□□ 0.57
LYSMD3-202ENST00000453259 CASP8AP2Q9UKL3 1982 aa18.6■□□□□ 0.57
LYSMD3-202ENST00000453259 RTL9Q8NET4 1388 aa18.59■□□□□ 0.57
LYSMD3-202ENST00000453259 VIL1P09327 827 aaKnown RBP18.59■□□□□ 0.57
LYSMD3-202ENST00000453259 RPS8P62241 208 aaKnown RBP18.59■□□□□ 0.57
LYSMD3-202ENST00000453259 KIF4BQ2VIQ3 1234 aa18.59■□□□□ 0.57
LYSMD3-202ENST00000453259 TBC1D10BQ4KMP7 808 aaPredicted RBP18.59■□□□□ 0.57
LYSMD3-202ENST00000453259 TBC1D16Q8TBP0 767 aa18.59■□□□□ 0.57
LYSMD3-202ENST00000453259 ZC3H12CQ9C0D7 883 aaKnown RBP18.59■□□□□ 0.57
LYSMD3-202ENST00000453259 TAF1P21675 1872 aa18.58■□□□□ 0.57
LYSMD3-202ENST00000453259 SHTN1A0MZ66 631 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms