RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 TMEM63CQ9P1W3 806 aa6.8□□□□□ -1.32
VPS8-211ENST00000452140 UNCXA6NJT0 531 aa6.79□□□□□ -1.32
VPS8-211ENST00000452140 SASH3O75995 380 aa6.79□□□□□ -1.32
VPS8-211ENST00000452140 ZNF16P17020 682 aaPredicted RBP6.79□□□□□ -1.32
VPS8-211ENST00000452140 RASSF7Q02833 373 aa6.79□□□□□ -1.32
VPS8-211ENST00000452140 EAPPQ56P03 285 aaPredicted RBP6.79□□□□□ -1.32
VPS8-211ENST00000452140 SVOPQ8N4V2 548 aa6.79□□□□□ -1.32
VPS8-211ENST00000452140 WWC3Q9ULE0 1092 aa6.79□□□□□ -1.32
VPS8-211ENST00000452140 FNDC3AQ9Y2H6 1198 aaKnown RBP6.79□□□□□ -1.32
VPS8-211ENST00000452140 AMOTL2Q9Y2J4 779 aa6.79□□□□□ -1.32
VPS8-211ENST00000452140 PNMA6FA0A0J9YX94 578 aa6.78□□□□□ -1.32
VPS8-211ENST00000452140 RBM47A0AV96 593 aaKnown RBP6.78□□□□□ -1.32
VPS8-211ENST00000452140 TNFRSF21O75509 655 aa6.78□□□□□ -1.32
VPS8-211ENST00000452140 RPLP1P05386 114 aaKnown RBP6.78□□□□□ -1.32
VPS8-211ENST00000452140 ALKBH8Q96BT7 664 aaKnown RBP6.78□□□□□ -1.32
VPS8-211ENST00000452140 SLC30A3Q99726 388 aa6.78□□□□□ -1.32
VPS8-211ENST00000452140 ELP3Q9H9T3 547 aa6.78□□□□□ -1.32
VPS8-211ENST00000452140 RNF19AQ9NV58 838 aa6.78□□□□□ -1.32
VPS8-211ENST00000452140 LDHBP07195 334 aaKnown RBP6.77□□□□□ -1.33
VPS8-211ENST00000452140 SLURP2P0DP57 97 aa6.77□□□□□ -1.33
VPS8-211ENST00000452140 TARSP26639 723 aaKnown RBP6.77□□□□□ -1.33
VPS8-211ENST00000452140 GSK3AP49840 483 aa6.77□□□□□ -1.33
VPS8-211ENST00000452140 KCNQ4P56696 695 aa6.77□□□□□ -1.33
VPS8-211ENST00000452140 SPEM2Q0P670 501 aa6.77□□□□□ -1.33
VPS8-211ENST00000452140 USPL1Q5W0Q7 1092 aa6.77□□□□□ -1.33
VPS8-211ENST00000452140 ZNF385CQ66K41 422 aaPredicted RBP6.77□□□□□ -1.33
VPS8-211ENST00000452140 MARK1Q9P0L2 795 aa6.77□□□□□ -1.33
VPS8-211ENST00000452140 ATXN7L1Q9ULK2 861 aaPredicted RBP6.77□□□□□ -1.33
VPS8-211ENST00000452140 EIF1AYO14602 144 aaKnown RBP6.76□□□□□ -1.33
VPS8-211ENST00000452140 NFKB1P19838 968 aa6.76□□□□□ -1.33
VPS8-211ENST00000452140 FGFR3P22607 806 aa6.76□□□□□ -1.33
VPS8-211ENST00000452140 CTBSQ01459 385 aa6.76□□□□□ -1.33
VPS8-211ENST00000452140 CCINQ13939 588 aa6.76□□□□□ -1.33
VPS8-211ENST00000452140 ENOX2Q16206 610 aaKnown RBP6.76□□□□□ -1.33
VPS8-211ENST00000452140 RNFT1Q5M7Z0 435 aa6.76□□□□□ -1.33
VPS8-211ENST00000452140 PDE12Q6L8Q7 609 aaKnown RBP6.76□□□□□ -1.33
VPS8-211ENST00000452140 NLRP13Q86W25 1043 aa6.76□□□□□ -1.33
VPS8-211ENST00000452140 BHMTQ93088 406 aa6.76□□□□□ -1.33
VPS8-211ENST00000452140 GMCL1Q96IK5 515 aa6.76□□□□□ -1.33
VPS8-211ENST00000452140 TRERF1Q96PN7 1200 aa6.76□□□□□ -1.33
VPS8-211ENST00000452140 CSRNP1Q96S65 589 aa6.76□□□□□ -1.33
VPS8-211ENST00000452140 GSX2Q9BZM3 304 aa6.76□□□□□ -1.33
VPS8-211ENST00000452140 CNTN3Q9P232 1028 aa6.76□□□□□ -1.33
VPS8-211ENST00000452140 ZFATQ9P243 1243 aa6.76□□□□□ -1.33
VPS8-211ENST00000452140 PHACTR2O75167 634 aa6.75□□□□□ -1.33
VPS8-211ENST00000452140 EGFRP00533 1210 aa6.75□□□□□ -1.33
VPS8-211ENST00000452140 CYP2E1P05181 493 aaPredicted RBP6.75□□□□□ -1.33
VPS8-211ENST00000452140 POLR3DP05423 398 aaPredicted RBP6.75□□□□□ -1.33
VPS8-211ENST00000452140 RARAP10276 462 aa6.75□□□□□ -1.33
VPS8-211ENST00000452140 SUZ12Q15022 739 aaKnown RBP6.75□□□□□ -1.33
VPS8-211ENST00000452140 FOXR1Q6PIV2 292 aa6.75□□□□□ -1.33
VPS8-211ENST00000452140 XKR5Q6UX68 686 aa6.75□□□□□ -1.33
VPS8-211ENST00000452140 C1orf127Q8N9H9 656 aa6.75□□□□□ -1.33
VPS8-211ENST00000452140 SNX29Q8TEQ0 813 aa6.75□□□□□ -1.33
VPS8-211ENST00000452140 FAM161BQ96MY7 647 aa6.75□□□□□ -1.33
VPS8-211ENST00000452140 PNMA5Q96PV4 448 aa6.75□□□□□ -1.33
VPS8-211ENST00000452140 CHRDQ9H2X0 955 aa6.75□□□□□ -1.33
VPS8-211ENST00000452140 ABI2Q9NYB9 513 aaPredicted RBP6.75□□□□□ -1.33
VPS8-211ENST00000452140 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.75□□□□□ -1.33
VPS8-211ENST00000452140 LOC100996750A0A140TA64 210 aa6.74□□□□□ -1.33
VPS8-211ENST00000452140 EREGO14944 169 aa6.74□□□□□ -1.33
VPS8-211ENST00000452140 MMP20O60882 483 aa6.74□□□□□ -1.33
VPS8-211ENST00000452140 LAMC2Q13753 1193 aa6.74□□□□□ -1.33
VPS8-211ENST00000452140 COL19A1Q14993 1142 aa6.74□□□□□ -1.33
VPS8-211ENST00000452140 ZNF326Q5BKZ1 582 aaKnown RBP6.74□□□□□ -1.33
VPS8-211ENST00000452140 DUSP9Q99956 384 aaKnown RBP6.74□□□□□ -1.33
VPS8-211ENST00000452140 CFHR5Q9BXR6 569 aa6.74□□□□□ -1.33
VPS8-211ENST00000452140 KRTAP4-6Q9BYQ5 205 aa6.74□□□□□ -1.33
VPS8-211ENST00000452140 KANSL3Q9P2N6 904 aa6.74□□□□□ -1.33
VPS8-211ENST00000452140 PHF24Q9UPV7 400 aa6.74□□□□□ -1.33
VPS8-211ENST00000452140 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.74□□□□□ -1.33
VPS8-211ENST00000452140 CPNE3O75131 537 aaKnown RBP6.73□□□□□ -1.33
VPS8-211ENST00000452140 IRS1P35568 1242 aa6.73□□□□□ -1.33
VPS8-211ENST00000452140 ATP2B2Q01814 1243 aa6.73□□□□□ -1.33
VPS8-211ENST00000452140 TTC39BQ5VTQ0 682 aaPredicted RBP6.73□□□□□ -1.33
VPS8-211ENST00000452140 PI16Q6UXB8 463 aa6.73□□□□□ -1.33
VPS8-211ENST00000452140 MRRFQ96E11 262 aaKnown RBP6.73□□□□□ -1.33
VPS8-211ENST00000452140 SCARF2Q96GP6 870 aaPredicted RBP6.73□□□□□ -1.33
VPS8-211ENST00000452140 ZFYVE28Q9HCC9 887 aa6.73□□□□□ -1.33
VPS8-211ENST00000452140 C2CD2LO14523 706 aa6.72□□□□□ -1.33
VPS8-211ENST00000452140 PRPF40AO75400 957 aaKnown RBP6.72□□□□□ -1.33
VPS8-211ENST00000452140 ARHGEF15O94989 841 aa6.72□□□□□ -1.33
VPS8-211ENST00000452140 NEFLP07196 543 aa6.72□□□□□ -1.33
VPS8-211ENST00000452140 MAP3K10Q02779 954 aa6.72□□□□□ -1.33
VPS8-211ENST00000452140 TBC1D8BQ0IIM8 1120 aa6.72□□□□□ -1.33
VPS8-211ENST00000452140 GAS6Q14393 721 aa6.72□□□□□ -1.33
VPS8-211ENST00000452140 KANK3Q6NY19 840 aa6.72□□□□□ -1.33
VPS8-211ENST00000452140 IGFLR1Q9H665 355 aa6.72□□□□□ -1.33
VPS8-211ENST00000452140 ENAMQ9NRM1 1142 aa6.72□□□□□ -1.33
VPS8-211ENST00000452140 KIAA1522Q9P206 1035 aaPredicted RBP6.72□□□□□ -1.33
VPS8-211ENST00000452140 PARP2Q9UGN5 583 aa6.72□□□□□ -1.33
VPS8-211ENST00000452140 BMP4P12644 408 aa6.71□□□□□ -1.34
VPS8-211ENST00000452140 CES1P23141 567 aa6.71□□□□□ -1.34
VPS8-211ENST00000452140 MLLT1Q03111 559 aaPredicted RBP6.71□□□□□ -1.34
VPS8-211ENST00000452140 SRSF11Q05519 484 aaKnown RBP6.71□□□□□ -1.34
VPS8-211ENST00000452140 EPS8L3Q8TE67 593 aaKnown RBP6.71□□□□□ -1.34
VPS8-211ENST00000452140 WHAMMQ8TF30 809 aa6.71□□□□□ -1.34
VPS8-211ENST00000452140 CCDC74AQ96AQ1 378 aa6.71□□□□□ -1.34
VPS8-211ENST00000452140 NSUN5Q96P11 429 aaKnown RBP6.71□□□□□ -1.34
VPS8-211ENST00000452140 DNAJC25Q9H1X3 360 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms