RNA–Protein interactions for RNA: ENST00000451579.1

LINC02248-202, Transcript of long intergenic non-protein coding RNA 2248, humanhuman

TSL 3 BASIC

Gene LINC02248, Length 606 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02248-202ENST00000451579 CHPF2Q9P2E5 772 aa12.79□□□□□ -0.36
LINC02248-202ENST00000451579 HACL1Q9UJ83 578 aa12.79□□□□□ -0.36
LINC02248-202ENST00000451579 IBTKQ9P2D0 1353 aaPredicted RBP12.79□□□□□ -0.36
LINC02248-202ENST00000451579 EPHX2P34913 555 aa12.78□□□□□ -0.36
LINC02248-202ENST00000451579 FMR1Q06787 632 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINC02248-202ENST00000451579 LMOD3Q0VAK6 560 aa12.78□□□□□ -0.36
LINC02248-202ENST00000451579 PARP10Q53GL7 1025 aa12.78□□□□□ -0.36
LINC02248-202ENST00000451579 MAP1SQ66K74 1059 aaPredicted RBP12.78□□□□□ -0.36
LINC02248-202ENST00000451579 PPP1R42Q7Z4L9 355 aa12.78□□□□□ -0.36
LINC02248-202ENST00000451579 NLRP10Q86W26 655 aa12.78□□□□□ -0.36
LINC02248-202ENST00000451579 LDHDQ86WU2 507 aa12.78□□□□□ -0.36
LINC02248-202ENST00000451579 JDP2Q8WYK2 163 aa12.78□□□□□ -0.36
LINC02248-202ENST00000451579 RUNDC1Q96C34 613 aa12.78□□□□□ -0.36
LINC02248-202ENST00000451579 CRAMP1Q96RY5 1269 aa12.78□□□□□ -0.36
LINC02248-202ENST00000451579 PASKQ96RG2 1323 aa12.78□□□□□ -0.36
LINC02248-202ENST00000451579 RIC1Q4ADV7 1423 aa12.78□□□□□ -0.36
LINC02248-202ENST00000451579 ITGBL1O95965 494 aaPredicted RBP12.77□□□□□ -0.37
LINC02248-202ENST00000451579 WDR43Q15061 677 aaKnown RBP eCLIP12.77□□□□□ -0.37
LINC02248-202ENST00000451579 LARGE2Q8N3Y3 721 aa12.77□□□□□ -0.37
LINC02248-202ENST00000451579 MS4A3Q96HJ5 214 aa12.77□□□□□ -0.37
LINC02248-202ENST00000451579 NLRP3Q96P20 1036 aa12.77□□□□□ -0.37
LINC02248-202ENST00000451579 ABCC4O15439 1325 aa12.77□□□□□ -0.37
LINC02248-202ENST00000451579 EPS15P42566 896 aa12.76□□□□□ -0.37
LINC02248-202ENST00000451579 AOC3Q16853 763 aa12.76□□□□□ -0.37
LINC02248-202ENST00000451579 SLC10A5Q5PT55 438 aa12.76□□□□□ -0.37
LINC02248-202ENST00000451579 GPC2Q8N158 579 aa12.76□□□□□ -0.37
LINC02248-202ENST00000451579 DDX21Q9NR30 783 aaKnown RBP eCLIP12.76□□□□□ -0.37
LINC02248-202ENST00000451579 BABAM1Q9NWV8 329 aa12.76□□□□□ -0.37
LINC02248-202ENST00000451579 ATP5J2-PTCD1G3V325 749 aa12.75□□□□□ -0.37
LINC02248-202ENST00000451579 PPIP5K2O43314 1243 aa12.75□□□□□ -0.37
LINC02248-202ENST00000451579 EIF6P56537 245 aaKnown RBP12.75□□□□□ -0.37
LINC02248-202ENST00000451579 TCIRG1Q13488 830 aa12.75□□□□□ -0.37
LINC02248-202ENST00000451579 RTL5Q5HYW3 569 aaPredicted RBP12.75□□□□□ -0.37
LINC02248-202ENST00000451579 HDGFL1Q5TGJ6 251 aa12.75□□□□□ -0.37
LINC02248-202ENST00000451579 CC2D2BQ6DHV5 1058 aa12.75□□□□□ -0.37
LINC02248-202ENST00000451579 TRMT112Q9UI30 125 aaKnown RBP12.75□□□□□ -0.37
LINC02248-202ENST00000451579 PCDHB13Q9Y5F0 798 aa12.75□□□□□ -0.37
LINC02248-202ENST00000451579 LTBP1Q14766 1721 aa12.74□□□□□ -0.37
LINC02248-202ENST00000451579 SCNN1DP51172 638 aa12.74□□□□□ -0.37
LINC02248-202ENST00000451579 CNTROBQ8N137 903 aa12.74□□□□□ -0.37
LINC02248-202ENST00000451579 PRKRIP1Q9H875 184 aaPredicted RBP12.74□□□□□ -0.37
LINC02248-202ENST00000451579 MBIPQ9NS73 344 aa12.74□□□□□ -0.37
LINC02248-202ENST00000451579 ATP6V0A2Q9Y487 856 aa12.74□□□□□ -0.37
LINC02248-202ENST00000451579 ELL2O00472 640 aaPredicted RBP12.73□□□□□ -0.37
LINC02248-202ENST00000451579 APAF1O14727 1248 aa12.73□□□□□ -0.37
LINC02248-202ENST00000451579 VEGFBP49765 207 aa12.73□□□□□ -0.37
LINC02248-202ENST00000451579 HSP90AB3PQ58FF7 597 aa12.73□□□□□ -0.37
LINC02248-202ENST00000451579 DUSP27Q5VZP5 1158 aa12.73□□□□□ -0.37
LINC02248-202ENST00000451579 NIM1KQ8IY84 436 aa12.73□□□□□ -0.37
LINC02248-202ENST00000451579 TNS4Q8IZW8 715 aa12.73□□□□□ -0.37
LINC02248-202ENST00000451579 FAM89AQ96GI7 184 aa12.73□□□□□ -0.37
LINC02248-202ENST00000451579 SCN4AP35499 1836 aa12.73□□□□□ -0.37
LINC02248-202ENST00000451579 ADAMTSL1Q8N6G6 1762 aa12.73□□□□□ -0.37
LINC02248-202ENST00000451579 CNTNAP1P78357 1384 aa12.72□□□□□ -0.37
LINC02248-202ENST00000451579 SH3TC1Q8TE82 1336 aa12.72□□□□□ -0.37
LINC02248-202ENST00000451579 TMEM88BA6NKF7 163 aa12.72□□□□□ -0.37
LINC02248-202ENST00000451579 ANKRD13DQ6ZTN6 518 aa12.72□□□□□ -0.37
LINC02248-202ENST00000451579 COL4A1P02462 1669 aa12.72□□□□□ -0.37
LINC02248-202ENST00000451579 SHTN1A0MZ66 631 aa12.71□□□□□ -0.37
LINC02248-202ENST00000451579 TRAF5O00463 557 aa12.71□□□□□ -0.37
LINC02248-202ENST00000451579 RAD17O75943 681 aa12.71□□□□□ -0.37
LINC02248-202ENST00000451579 LMOD1P29536 600 aaPredicted RBP12.71□□□□□ -0.37
LINC02248-202ENST00000451579 CXCL9Q07325 125 aa12.71□□□□□ -0.37
LINC02248-202ENST00000451579 CCDC184Q52MB2 194 aa12.71□□□□□ -0.37
LINC02248-202ENST00000451579 DPP8Q6V1X1 898 aaPredicted RBP12.71□□□□□ -0.37
LINC02248-202ENST00000451579 DDX46Q7L014 1031 aaKnown RBP12.71□□□□□ -0.37
LINC02248-202ENST00000451579 PNMA8AQ86V59 439 aaPredicted RBP12.71□□□□□ -0.37
LINC02248-202ENST00000451579 MPNDQ8N594 471 aa12.71□□□□□ -0.37
LINC02248-202ENST00000451579 PLBD2Q8NHP8 589 aa12.71□□□□□ -0.37
LINC02248-202ENST00000451579 JARID2Q92833 1246 aaPredicted RBP12.71□□□□□ -0.37
LINC02248-202ENST00000451579 CELF1Q92879 486 aaKnown RBP12.71□□□□□ -0.37
LINC02248-202ENST00000451579 CFAP44Q96MT7 982 aa12.71□□□□□ -0.37
LINC02248-202ENST00000451579 ISCA1Q9BUE6 129 aa12.71□□□□□ -0.37
LINC02248-202ENST00000451579 PHAXQ9H814 394 aaKnown RBP12.71□□□□□ -0.37
LINC02248-202ENST00000451579 TAF1P21675 1872 aa12.7□□□□□ -0.38
LINC02248-202ENST00000451579 FOXN1O15353 648 aa12.7□□□□□ -0.38
LINC02248-202ENST00000451579 ZNF853P0CG23 659 aa12.7□□□□□ -0.38
LINC02248-202ENST00000451579 CHRM1P11229 460 aaPredicted RBP12.7□□□□□ -0.38
LINC02248-202ENST00000451579 GRAPQ13588 217 aa12.7□□□□□ -0.38
LINC02248-202ENST00000451579 SP8Q8IXZ3 490 aa12.7□□□□□ -0.38
LINC02248-202ENST00000451579 GRAPLQ8TC17 118 aaPredicted RBP12.7□□□□□ -0.38
LINC02248-202ENST00000451579 GPR101Q96P66 508 aaPredicted RBP12.7□□□□□ -0.38
LINC02248-202ENST00000451579 TMX4Q9H1E5 349 aaPredicted RBP12.7□□□□□ -0.38
LINC02248-202ENST00000451579 DBF4Q9UBU7 674 aaPredicted RBP12.7□□□□□ -0.38
LINC02248-202ENST00000451579 LAMB2P55268 1798 aa12.69□□□□□ -0.38
LINC02248-202ENST00000451579 BBOX1O75936 387 aa12.69□□□□□ -0.38
LINC02248-202ENST00000451579 GMPSP49915 693 aaPredicted RBP12.69□□□□□ -0.38
LINC02248-202ENST00000451579 IFNL1Q8IU54 200 aa12.69□□□□□ -0.38
LINC02248-202ENST00000451579 C8orf58Q8NAV2 365 aa12.69□□□□□ -0.38
LINC02248-202ENST00000451579 DCBLD2Q96PD2 775 aa12.69□□□□□ -0.38
LINC02248-202ENST00000451579 RTFDC1Q9BY42 306 aaPredicted RBP12.69□□□□□ -0.38
LINC02248-202ENST00000451579 ZNRF3Q9ULT6 936 aa12.69□□□□□ -0.38
LINC02248-202ENST00000451579 ANKRD36CQ5JPF3 1778 aa12.69□□□□□ -0.38
LINC02248-202ENST00000451579 YDJCA8MPS7 323 aa12.68□□□□□ -0.38
LINC02248-202ENST00000451579 KIAA2012Q0VF49 1180 aa12.68□□□□□ -0.38
LINC02248-202ENST00000451579 GRM1Q13255 1194 aa12.68□□□□□ -0.38
LINC02248-202ENST00000451579 GRIPAP1Q4V328 841 aa12.68□□□□□ -0.38
LINC02248-202ENST00000451579 GPRC5DQ9NZD1 345 aa12.68□□□□□ -0.38
LINC02248-202ENST00000451579 ABT1Q9ULW3 272 aaKnown RBP12.68□□□□□ -0.38
LINC02248-202ENST00000451579 DUOX1Q9NRD9 1551 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms