RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 NUP98P52948 1817 aa22.73■■□□□ 1.23
FAM3A-216ENST00000449971 HDGFL1Q5TGJ6 251 aa22.73■■□□□ 1.23
FAM3A-216ENST00000449971 DUSP27Q5VZP5 1158 aa22.73■■□□□ 1.23
FAM3A-216ENST00000449971 LRP10Q7Z4F1 713 aa22.73■■□□□ 1.23
FAM3A-216ENST00000449971 CRAMP1Q96RY5 1269 aa22.73■■□□□ 1.23
FAM3A-216ENST00000449971 GLIS2Q9BZE0 524 aaPredicted RBP22.73■■□□□ 1.23
FAM3A-216ENST00000449971 GPRC5DQ9NZD1 345 aa22.73■■□□□ 1.23
FAM3A-216ENST00000449971 HOXB7P09629 217 aa22.72■■□□□ 1.23
FAM3A-216ENST00000449971 GRIPAP1Q4V328 841 aa22.72■■□□□ 1.23
FAM3A-216ENST00000449971 GIGYF2Q6Y7W6 1299 aaKnown RBP22.72■■□□□ 1.23
FAM3A-216ENST00000449971 COPS6Q7L5N1 327 aa22.72■■□□□ 1.23
FAM3A-216ENST00000449971 XAGE3Q8WTP9 111 aa22.72■■□□□ 1.23
FAM3A-216ENST00000449971 TRPM7Q96QT4 1865 aa22.72■■□□□ 1.23
FAM3A-216ENST00000449971 NTSR2O95665 410 aa22.71■■□□□ 1.23
FAM3A-216ENST00000449971 GMPSP49915 693 aaPredicted RBP22.71■■□□□ 1.23
FAM3A-216ENST00000449971 NLRP3Q96P20 1036 aa22.71■■□□□ 1.23
FAM3A-216ENST00000449971 CHPF2Q9P2E5 772 aa22.71■■□□□ 1.23
FAM3A-216ENST00000449971 CXCL9Q07325 125 aa22.7■■□□□ 1.22
FAM3A-216ENST00000449971 PPP1R42Q7Z4L9 355 aa22.7■■□□□ 1.22
FAM3A-216ENST00000449971 BCL2L13Q9BXK5 485 aa22.7■■□□□ 1.22
FAM3A-216ENST00000449971 RIC1Q4ADV7 1423 aa22.69■■□□□ 1.22
FAM3A-216ENST00000449971 ELL2O00472 640 aaPredicted RBP22.69■■□□□ 1.22
FAM3A-216ENST00000449971 RAD17O75943 681 aa22.69■■□□□ 1.22
FAM3A-216ENST00000449971 MAP2K2P36507 400 aa22.69■■□□□ 1.22
FAM3A-216ENST00000449971 SAPCD2Q86UD0 394 aa22.69■■□□□ 1.22
FAM3A-216ENST00000449971 ZNF34Q8IZ26 560 aa22.69■■□□□ 1.22
FAM3A-216ENST00000449971 ZNRF3Q9ULT6 936 aa22.69■■□□□ 1.22
FAM3A-216ENST00000449971 THSD7BQ9C0I4 1608 aa22.68■■□□□ 1.22
FAM3A-216ENST00000449971 MCOLN1Q9GZU1 580 aa22.68■■□□□ 1.22
FAM3A-216ENST00000449971 DBF4Q9UBU7 674 aaPredicted RBP22.68■■□□□ 1.22
FAM3A-216ENST00000449971 ATP6V0A2Q9Y487 856 aa22.68■■□□□ 1.22
FAM3A-216ENST00000449971 IBTKQ9P2D0 1353 aaPredicted RBP22.67■■□□□ 1.22
FAM3A-216ENST00000449971 ABCC4O15439 1325 aa22.67■■□□□ 1.22
FAM3A-216ENST00000449971 CCDC27Q2M243 656 aa22.67■■□□□ 1.22
FAM3A-216ENST00000449971 DPP8Q6V1X1 898 aaPredicted RBP22.67■■□□□ 1.22
FAM3A-216ENST00000449971 WWC1Q8IX03 1113 aa22.67■■□□□ 1.22
FAM3A-216ENST00000449971 FAM9BQ8IZU0 186 aa22.67■■□□□ 1.22
FAM3A-216ENST00000449971 CASP8AP2Q9UKL3 1982 aa22.67■■□□□ 1.22
FAM3A-216ENST00000449971 CIAPIN1Q6FI81 312 aa22.66■■□□□ 1.22
FAM3A-216ENST00000449971 SUPT20HQ8NEM7 779 aa22.66■■□□□ 1.22
FAM3A-216ENST00000449971 ZNF428Q96B54 188 aa22.66■■□□□ 1.22
FAM3A-216ENST00000449971 UTP14AQ9BVJ6 771 aaKnown RBP22.66■■□□□ 1.22
FAM3A-216ENST00000449971 SALL2Q9Y467 1007 aaPredicted RBP22.66■■□□□ 1.22
FAM3A-216ENST00000449971 DGKZQ13574 1117 aa22.65■■□□□ 1.22
FAM3A-216ENST00000449971 PARP10Q53GL7 1025 aa22.65■■□□□ 1.22
FAM3A-216ENST00000449971 C8orf58Q8NAV2 365 aa22.65■■□□□ 1.22
FAM3A-216ENST00000449971 TRPM4Q8TD43 1214 aa22.65■■□□□ 1.22
FAM3A-216ENST00000449971 SHTN1A0MZ66 631 aa22.64■■□□□ 1.21
FAM3A-216ENST00000449971 HCLS1P14317 486 aaPredicted RBP22.64■■□□□ 1.21
FAM3A-216ENST00000449971 HSP90AB3PQ58FF7 597 aa22.64■■□□□ 1.21
FAM3A-216ENST00000449971 MPNDQ8N594 471 aa22.64■■□□□ 1.21
FAM3A-216ENST00000449971 HYPKQ9NX55 129 aa22.64■■□□□ 1.21
FAM3A-216ENST00000449971 CA12O43570 354 aa22.63■■□□□ 1.21
FAM3A-216ENST00000449971 HIRAP54198 1017 aaPredicted RBP22.63■■□□□ 1.21
FAM3A-216ENST00000449971 DLK2Q6UY11 383 aa22.63■■□□□ 1.21
FAM3A-216ENST00000449971 TSR2Q969E8 191 aaKnown RBP22.63■■□□□ 1.21
FAM3A-216ENST00000449971 RGS19P49795 217 aa22.62■■□□□ 1.21
FAM3A-216ENST00000449971 BRPF1P55201 1214 aaPredicted RBP22.62■■□□□ 1.21
FAM3A-216ENST00000449971 TCIRG1Q13488 830 aa22.62■■□□□ 1.21
FAM3A-216ENST00000449971 NCBP3Q53F19 620 aaKnown RBP22.62■■□□□ 1.21
FAM3A-216ENST00000449971 ANKRD13DQ6ZTN6 518 aa22.62■■□□□ 1.21
FAM3A-216ENST00000449971 USP48Q86UV5 1035 aa22.62■■□□□ 1.21
FAM3A-216ENST00000449971 ZIC5Q96T25 663 aa22.62■■□□□ 1.21
FAM3A-216ENST00000449971 TNIP1Q15025 636 aa22.61■■□□□ 1.21
FAM3A-216ENST00000449971 PLBD2Q8NHP8 589 aa22.61■■□□□ 1.21
FAM3A-216ENST00000449971 VPS33BQ9H267 617 aa22.61■■□□□ 1.21
FAM3A-216ENST00000449971 CNOT7Q9UIV1 285 aaKnown RBP22.61■■□□□ 1.21
FAM3A-216ENST00000449971 HUNKP57058 714 aa22.6■■□□□ 1.21
FAM3A-216ENST00000449971 DDX46Q7L014 1031 aaKnown RBP22.6■■□□□ 1.21
FAM3A-216ENST00000449971 CDC37L1Q7L3B6 337 aa22.6■■□□□ 1.21
FAM3A-216ENST00000449971 TSPYL6Q8N831 410 aa22.6■■□□□ 1.21
FAM3A-216ENST00000449971 RTFDC1Q9BY42 306 aaPredicted RBP22.6■■□□□ 1.21
FAM3A-216ENST00000449971 H7C1D1 291 aa22.59■■□□□ 1.21
FAM3A-216ENST00000449971 BBOX1O75936 387 aa22.59■■□□□ 1.21
FAM3A-216ENST00000449971 KIAA2012Q0VF49 1180 aa22.59■■□□□ 1.21
FAM3A-216ENST00000449971 NLRP10Q86W26 655 aa22.59■■□□□ 1.21
FAM3A-216ENST00000449971 SP8Q8IXZ3 490 aa22.59■■□□□ 1.21
FAM3A-216ENST00000449971 MICALL2Q8IY33 904 aa22.59■■□□□ 1.21
FAM3A-216ENST00000449971 CHMP4AQ9BY43 222 aa22.59■■□□□ 1.21
FAM3A-216ENST00000449971 ZBTB12Q9Y330 459 aaPredicted RBP22.59■■□□□ 1.21
FAM3A-216ENST00000449971 IL16Q14005 1332 aa22.58■■□□□ 1.21
FAM3A-216ENST00000449971 YDJCA8MPS7 323 aa22.58■■□□□ 1.21
FAM3A-216ENST00000449971 SLC10A5Q5PT55 438 aa22.58■■□□□ 1.21
FAM3A-216ENST00000449971 CCDC30Q5VVM6 783 aa22.58■■□□□ 1.21
FAM3A-216ENST00000449971 SAMD7Q7Z3H4 446 aa22.57■■□□□ 1.2
FAM3A-216ENST00000449971 WDR63Q8IWG1 891 aa22.57■■□□□ 1.2
FAM3A-216ENST00000449971 ZC3H15Q8WU90 426 aaKnown RBP22.57■■□□□ 1.2
FAM3A-216ENST00000449971 HHIPL1Q96JK4 782 aa22.57■■□□□ 1.2
FAM3A-216ENST00000449971 PHAXQ9H814 394 aaKnown RBP22.57■■□□□ 1.2
FAM3A-216ENST00000449971 PGAP2Q9UHJ9 254 aa22.57■■□□□ 1.2
FAM3A-216ENST00000449971 TRMT112Q9UI30 125 aaKnown RBP22.57■■□□□ 1.2
FAM3A-216ENST00000449971 GOLGA2Q08379 1002 aa22.56■■□□□ 1.2
FAM3A-216ENST00000449971 NOGQ13253 232 aa22.56■■□□□ 1.2
FAM3A-216ENST00000449971 GRAPQ13588 217 aa22.56■■□□□ 1.2
FAM3A-216ENST00000449971 TBC1D10BQ4KMP7 808 aaPredicted RBP22.56■■□□□ 1.2
FAM3A-216ENST00000449971 RBM26Q5T8P6 1007 aaKnown RBP22.56■■□□□ 1.2
FAM3A-216ENST00000449971 RIC3Q7Z5B4 369 aa22.56■■□□□ 1.2
FAM3A-216ENST00000449971 GRAPLQ8TC17 118 aaPredicted RBP22.56■■□□□ 1.2
FAM3A-216ENST00000449971 CDHR2Q9BYE9 1310 aa22.56■■□□□ 1.2
FAM3A-216ENST00000449971 ATP5J2-PTCD1G3V325 749 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms