RNA–Protein interactions for RNA: ENST00000449457.1

LINC02561-201, Transcript of long intergenic non-protein coding RNA 2561, humanhuman

TSL 3 BASIC

Gene LINC02561, Length 692 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02561-201ENST00000449457 BMP2KQ9NSY1 1161 aaPredicted RBP13.36□□□□□ -0.27
LINC02561-201ENST00000449457 MIS18AQ9NYP9 233 aa13.36□□□□□ -0.27
LINC02561-201ENST00000449457 SHTN1A0MZ66 631 aa13.35□□□□□ -0.27
LINC02561-201ENST00000449457 GPTP24298 496 aa13.35□□□□□ -0.27
LINC02561-201ENST00000449457 GAS2L2Q8NHY3 880 aa13.35□□□□□ -0.27
LINC02561-201ENST00000449457 MS4A4AQ96JQ5 239 aa13.35□□□□□ -0.27
LINC02561-201ENST00000449457 GPR101Q96P66 508 aaPredicted RBP13.35□□□□□ -0.27
LINC02561-201ENST00000449457 ZIC5Q96T25 663 aa13.35□□□□□ -0.27
LINC02561-201ENST00000449457 ZNF408Q9H9D4 720 aa13.35□□□□□ -0.27
LINC02561-201ENST00000449457 LAMB4A4D0S4 1761 aa13.35□□□□□ -0.27
LINC02561-201ENST00000449457 MAP2K1Q02750 393 aaPredicted RBP13.34□□□□□ -0.27
LINC02561-201ENST00000449457 MKRN3Q13064 507 aaKnown RBP13.34□□□□□ -0.27
LINC02561-201ENST00000449457 GPC2Q8N158 579 aa13.34□□□□□ -0.27
LINC02561-201ENST00000449457 MCOLN1Q9GZU1 580 aa13.34□□□□□ -0.27
LINC02561-201ENST00000449457 AOC3Q16853 763 aa13.33□□□□□ -0.28
LINC02561-201ENST00000449457 PNMA8AQ86V59 439 aaPredicted RBP13.33□□□□□ -0.28
LINC02561-201ENST00000449457 TEX13AQ9BXU3 409 aaPredicted RBP13.33□□□□□ -0.28
LINC02561-201ENST00000449457 GLIS2Q9BZE0 524 aaPredicted RBP13.33□□□□□ -0.28
LINC02561-201ENST00000449457 RSPH6AQ9H0K4 717 aa13.33□□□□□ -0.28
LINC02561-201ENST00000449457 UBN2Q6ZU65 1347 aa13.33□□□□□ -0.28
LINC02561-201ENST00000449457 NUP98P52948 1817 aa13.32□□□□□ -0.28
LINC02561-201ENST00000449457 KLRG2A4D1S0 409 aaPredicted RBP13.32□□□□□ -0.28
LINC02561-201ENST00000449457 GTF2E1P29083 439 aaPredicted RBP13.32□□□□□ -0.28
LINC02561-201ENST00000449457 LMOD1P29536 600 aaPredicted RBP13.32□□□□□ -0.28
LINC02561-201ENST00000449457 EIF6P56537 245 aaKnown RBP13.32□□□□□ -0.28
LINC02561-201ENST00000449457 TTLL7Q6ZT98 887 aa13.32□□□□□ -0.28
LINC02561-201ENST00000449457 RTKN2Q8IZC4 609 aa13.32□□□□□ -0.28
LINC02561-201ENST00000449457 LARGE2Q8N3Y3 721 aa13.32□□□□□ -0.28
LINC02561-201ENST00000449457 ZNF652Q9Y2D9 606 aa13.32□□□□□ -0.28
LINC02561-201ENST00000449457 CELF2O95319 508 aaKnown RBP13.31□□□□□ -0.28
LINC02561-201ENST00000449457 TPTE2Q6XPS3 522 aa13.31□□□□□ -0.28
LINC02561-201ENST00000449457 JDP2Q8WYK2 163 aa13.31□□□□□ -0.28
LINC02561-201ENST00000449457 ZBTB3Q9H5J0 574 aa13.31□□□□□ -0.28
LINC02561-201ENST00000449457 TLL2Q9Y6L7 1015 aa13.31□□□□□ -0.28
LINC02561-201ENST00000449457 PPEF1O14829 653 aaPredicted RBP13.3□□□□□ -0.28
LINC02561-201ENST00000449457 PER1O15534 1290 aaPredicted RBP13.3□□□□□ -0.28
LINC02561-201ENST00000449457 SOX10P56693 466 aa13.3□□□□□ -0.28
LINC02561-201ENST00000449457 TRIM26Q12899 539 aaPredicted RBP13.3□□□□□ -0.28
LINC02561-201ENST00000449457 CIAPIN1Q6FI81 312 aa13.3□□□□□ -0.28
LINC02561-201ENST00000449457 TRPM4Q8TD43 1214 aa13.3□□□□□ -0.28
LINC02561-201ENST00000449457 BEGAINQ9BUH8 593 aa13.3□□□□□ -0.28
LINC02561-201ENST00000449457 TAF1P21675 1872 aa13.29□□□□□ -0.28
LINC02561-201ENST00000449457 PPIP5K2O43314 1243 aa13.29□□□□□ -0.28
LINC02561-201ENST00000449457 SNRPA1P09661 255 aaKnown RBP13.29□□□□□ -0.28
LINC02561-201ENST00000449457 MYL6BP14649 208 aa13.29□□□□□ -0.28
LINC02561-201ENST00000449457 DGKZQ13574 1117 aa13.29□□□□□ -0.28
LINC02561-201ENST00000449457 CLEC4GQ6UXB4 293 aa13.29□□□□□ -0.28
LINC02561-201ENST00000449457 RPGRQ92834 1020 aaKnown RBP13.29□□□□□ -0.28
LINC02561-201ENST00000449457 PSMD1Q99460 953 aa13.29□□□□□ -0.28
LINC02561-201ENST00000449457 TRIM35Q9UPQ4 493 aa13.29□□□□□ -0.28
LINC02561-201ENST00000449457 ECE1P42892 770 aa13.28□□□□□ -0.28
LINC02561-201ENST00000449457 GMPSP49915 693 aaPredicted RBP13.28□□□□□ -0.28
LINC02561-201ENST00000449457 CRY2Q49AN0 593 aa13.28□□□□□ -0.28
LINC02561-201ENST00000449457 SUSD4Q5VX71 490 aa13.28□□□□□ -0.28
LINC02561-201ENST00000449457 NIM1KQ8IY84 436 aa13.28□□□□□ -0.28
LINC02561-201ENST00000449457 THUMPD2Q9BTF0 503 aaKnown RBP13.28□□□□□ -0.28
LINC02561-201ENST00000449457 RRP7AQ9Y3A4 280 aaKnown RBP13.28□□□□□ -0.28
LINC02561-201ENST00000449457 RIC1Q4ADV7 1423 aa13.28□□□□□ -0.28
LINC02561-201ENST00000449457 COL4A1P02462 1669 aa13.28□□□□□ -0.28
LINC02561-201ENST00000449457 LAMB2P55268 1798 aa13.27□□□□□ -0.28
LINC02561-201ENST00000449457 KDM3BQ7LBC6 1761 aa13.27□□□□□ -0.28
LINC02561-201ENST00000449457 RAD17O75943 681 aa13.27□□□□□ -0.29
LINC02561-201ENST00000449457 ALDH1B1P30837 517 aa13.27□□□□□ -0.29
LINC02561-201ENST00000449457 RGS19P49795 217 aa13.27□□□□□ -0.29
LINC02561-201ENST00000449457 CLCN6P51797 869 aa13.27□□□□□ -0.29
LINC02561-201ENST00000449457 SAPCD2Q86UD0 394 aa13.27□□□□□ -0.29
LINC02561-201ENST00000449457 NPC1L1Q9UHC9 1359 aa13.27□□□□□ -0.29
LINC02561-201ENST00000449457 ANXA1P04083 346 aa13.26□□□□□ -0.29
LINC02561-201ENST00000449457 HIRAP54198 1017 aaPredicted RBP13.26□□□□□ -0.29
LINC02561-201ENST00000449457 DLG5Q8TDM6 1919 aa13.26□□□□□ -0.29
LINC02561-201ENST00000449457 GPRC5DQ9NZD1 345 aa13.26□□□□□ -0.29
LINC02561-201ENST00000449457 MAP3K15Q6ZN16 1313 aa13.25□□□□□ -0.29
LINC02561-201ENST00000449457 NTSR2O95665 410 aa13.25□□□□□ -0.29
LINC02561-201ENST00000449457 CXCL9Q07325 125 aa13.25□□□□□ -0.29
LINC02561-201ENST00000449457 USP50Q70EL3 339 aaPredicted RBP13.25□□□□□ -0.29
LINC02561-201ENST00000449457 DUOX1Q9NRD9 1551 aa13.24□□□□□ -0.29
LINC02561-201ENST00000449457 ABCC4O15439 1325 aa13.24□□□□□ -0.29
LINC02561-201ENST00000449457 EGFRP00533 1210 aa13.24□□□□□ -0.29
LINC02561-201ENST00000449457 U2AF1L5P0DN76 240 aaPredicted RBP13.24□□□□□ -0.29
LINC02561-201ENST00000449457 U2AF1Q01081 240 aaKnown RBP eCLIP13.24□□□□□ -0.29
LINC02561-201ENST00000449457 NBR1Q14596 966 aa13.24□□□□□ -0.29
LINC02561-201ENST00000449457 RTF1Q92541 710 aaKnown RBP13.24□□□□□ -0.29
LINC02561-201ENST00000449457 ADARB2Q9NS39 739 aaKnown RBP13.24□□□□□ -0.29
LINC02561-201ENST00000449457 WDR70Q9NW82 654 aa13.24□□□□□ -0.29
LINC02561-201ENST00000449457 TIMELESSQ9UNS1 1208 aa13.24□□□□□ -0.29
LINC02561-201ENST00000449457 YDJCA8MPS7 323 aa13.23□□□□□ -0.29
LINC02561-201ENST00000449457 ATN1P54259 1190 aaPredicted RBP13.23□□□□□ -0.29
LINC02561-201ENST00000449457 USP48Q86UV5 1035 aa13.23□□□□□ -0.29
LINC02561-201ENST00000449457 PDE4DIPQ5VU43 2346 aa13.22□□□□□ -0.29
LINC02561-201ENST00000449457 ADM5C9JUS6 153 aa13.22□□□□□ -0.29
LINC02561-201ENST00000449457 KIF6Q6ZMV9 814 aa13.22□□□□□ -0.29
LINC02561-201ENST00000449457 RBM17Q96I25 401 aaKnown RBP13.22□□□□□ -0.29
LINC02561-201ENST00000449457 NYXQ9GZU5 481 aa13.22□□□□□ -0.29
LINC02561-201ENST00000449457 ASTN2O75129 1339 aaPredicted RBP13.21□□□□□ -0.29
LINC02561-201ENST00000449457 HCLS1P14317 486 aaPredicted RBP13.21□□□□□ -0.29
LINC02561-201ENST00000449457 HOXA10P31260 410 aaPredicted RBP13.21□□□□□ -0.29
LINC02561-201ENST00000449457 BRPF1P55201 1214 aaPredicted RBP13.21□□□□□ -0.29
LINC02561-201ENST00000449457 HUNKP57058 714 aa13.21□□□□□ -0.29
LINC02561-201ENST00000449457 PROSER3Q2NL68 480 aa13.21□□□□□ -0.29
LINC02561-201ENST00000449457 SAMD7Q7Z3H4 446 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms