RNA–Protein interactions for RNA: ENST00000449395.5

PRDM15-208, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 6,662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-208ENST00000449395 ZSCAN12O43309 604 aa12.16□□□□□ -0.46
PRDM15-208ENST00000449395 SSRP1Q08945 709 aaKnown RBP12.16□□□□□ -0.46
PRDM15-208ENST00000449395 FKBP15Q5T1M5 1219 aa12.16□□□□□ -0.46
PRDM15-208ENST00000449395 TBC1D2Q9BYX2 928 aa12.16□□□□□ -0.46
PRDM15-208ENST00000449395 ARHGEF10O15013 1369 aa12.16□□□□□ -0.46
PRDM15-208ENST00000449395 EVI5LQ96CN4 794 aa12.16□□□□□ -0.46
PRDM15-208ENST00000449395 FLIIQ13045 1269 aa12.16□□□□□ -0.46
PRDM15-208ENST00000449395 FAM47CQ5HY64 1035 aa12.16□□□□□ -0.46
PRDM15-208ENST00000449395 TSG101Q99816 390 aa12.16□□□□□ -0.46
PRDM15-208ENST00000449395 ABCA10Q8WWZ4 1543 aa12.15□□□□□ -0.46
PRDM15-208ENST00000449395 CTAGE5O15320 804 aa12.15□□□□□ -0.46
PRDM15-208ENST00000449395 GBP2P32456 591 aaPredicted RBP12.15□□□□□ -0.46
PRDM15-208ENST00000449395 KCNQ4P56696 695 aa12.15□□□□□ -0.46
PRDM15-208ENST00000449395 JARID2Q92833 1246 aaPredicted RBP12.15□□□□□ -0.46
PRDM15-208ENST00000449395 TOP1P11387 765 aaKnown RBP12.15□□□□□ -0.46
PRDM15-208ENST00000449395 TNPO1Q92973 898 aaKnown RBP12.15□□□□□ -0.46
PRDM15-208ENST00000449395 PLCD4Q9BRC7 762 aa12.15□□□□□ -0.46
PRDM15-208ENST00000449395 SPC25Q9HBM1 224 aa12.15□□□□□ -0.46
PRDM15-208ENST00000449395 PDCL2Q8N4E4 241 aa12.15□□□□□ -0.46
PRDM15-208ENST00000449395 GOLGA8BA8MQT2 603 aa12.15□□□□□ -0.47
PRDM15-208ENST00000449395 CASQ1P31415 396 aa12.15□□□□□ -0.47
PRDM15-208ENST00000449395 CCT2P78371 535 aaKnown RBP12.15□□□□□ -0.47
PRDM15-208ENST00000449395 LARP6Q9BRS8 491 aaKnown RBP12.15□□□□□ -0.47
PRDM15-208ENST00000449395 RNF41Q9H4P4 317 aaPredicted RBP12.15□□□□□ -0.47
PRDM15-208ENST00000449395 IFIT3O14879 490 aaKnown RBP12.14□□□□□ -0.47
PRDM15-208ENST00000449395 MAP3K2Q9Y2U5 619 aa12.14□□□□□ -0.47
PRDM15-208ENST00000449395 GOLGA8AA7E2F4 631 aa12.14□□□□□ -0.47
PRDM15-208ENST00000449395 POTEJP0CG39 1038 aa12.14□□□□□ -0.47
PRDM15-208ENST00000449395 DEFB132Q7Z7B7 95 aa12.14□□□□□ -0.47
PRDM15-208ENST00000449395 CLIP2Q9UDT6 1046 aa12.14□□□□□ -0.47
PRDM15-208ENST00000449395 KIF5CO60282 957 aa12.14□□□□□ -0.47
PRDM15-208ENST00000449395 NEBLO76041 1014 aa12.14□□□□□ -0.47
PRDM15-208ENST00000449395 FMNL1O95466 1100 aaPredicted RBP12.14□□□□□ -0.47
PRDM15-208ENST00000449395 BRDTQ58F21 947 aaPredicted RBP12.14□□□□□ -0.47
PRDM15-208ENST00000449395 ARMC9Q7Z3E5 817 aa12.14□□□□□ -0.47
PRDM15-208ENST00000449395 ZFYVE16Q7Z3T8 1539 aa12.14□□□□□ -0.47
PRDM15-208ENST00000449395 BAG3O95817 575 aa12.14□□□□□ -0.47
PRDM15-208ENST00000449395 CACNA2D4Q7Z3S7 1137 aa12.14□□□□□ -0.47
PRDM15-208ENST00000449395 LDHCP07864 332 aa12.14□□□□□ -0.47
PRDM15-208ENST00000449395 IRX3P78415 501 aaPredicted RBP12.14□□□□□ -0.47
PRDM15-208ENST00000449395 TMCO3Q6UWJ1 677 aa12.14□□□□□ -0.47
PRDM15-208ENST00000449395 TBC1D9Q6ZT07 1266 aa12.14□□□□□ -0.47
PRDM15-208ENST00000449395 CNNM3Q8NE01 707 aa12.14□□□□□ -0.47
PRDM15-208ENST00000449395 CKAP2LQ8IYA6 745 aa12.13□□□□□ -0.47
PRDM15-208ENST00000449395 DPF3Q92784 378 aa12.13□□□□□ -0.47
PRDM15-208ENST00000449395 KIF18AQ8NI77 898 aa12.13□□□□□ -0.47
PRDM15-208ENST00000449395 GBP3Q9H0R5 595 aa12.13□□□□□ -0.47
PRDM15-208ENST00000449395 ECHDC1Q9NTX5 307 aa12.13□□□□□ -0.47
PRDM15-208ENST00000449395 UNC13AQ9UPW8 1703 aa12.13□□□□□ -0.47
PRDM15-208ENST00000449395 NLRP5P59047 1200 aa12.13□□□□□ -0.47
PRDM15-208ENST00000449395 TAF3Q5VWG9 929 aa12.13□□□□□ -0.47
PRDM15-208ENST00000449395 RAB34Q9BZG1 259 aa12.13□□□□□ -0.47
PRDM15-208ENST00000449395 PIM2Q9P1W9 311 aa12.13□□□□□ -0.47
PRDM15-208ENST00000449395 SCAF11Q99590 1463 aaKnown RBP12.13□□□□□ -0.47
PRDM15-208ENST00000449395 ABCC2Q92887 1545 aa12.13□□□□□ -0.47
PRDM15-208ENST00000449395 GJB2P29033 226 aa12.13□□□□□ -0.47
PRDM15-208ENST00000449395 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.13□□□□□ -0.47
PRDM15-208ENST00000449395 TTC21BQ7Z4L5 1316 aa12.13□□□□□ -0.47
PRDM15-208ENST00000449395 NLGN1Q8N2Q7 840 aa12.13□□□□□ -0.47
PRDM15-208ENST00000449395 GJD4Q96KN9 370 aaPredicted RBP12.13□□□□□ -0.47
PRDM15-208ENST00000449395 HINFPQ9BQA5 517 aa12.13□□□□□ -0.47
PRDM15-208ENST00000449395 CRACR2AQ9BSW2 395 aa12.13□□□□□ -0.47
PRDM15-208ENST00000449395 NSD2O96028 1365 aa12.13□□□□□ -0.47
PRDM15-208ENST00000449395 KDM5BQ9UGL1 1544 aa12.12□□□□□ -0.47
PRDM15-208ENST00000449395 NOS1P29475 1434 aa12.12□□□□□ -0.47
PRDM15-208ENST00000449395 TRAPPC8Q9Y2L5 1435 aa12.12□□□□□ -0.47
PRDM15-208ENST00000449395 FGFR1OPO95684 399 aaKnown RBP12.12□□□□□ -0.47
PRDM15-208ENST00000449395 TMEM266Q2M3C6 531 aa12.12□□□□□ -0.47
PRDM15-208ENST00000449395 CATIPQ7Z7H3 387 aa12.12□□□□□ -0.47
PRDM15-208ENST00000449395 FSIP1Q8NA03 581 aa12.12□□□□□ -0.47
PRDM15-208ENST00000449395 LBHD1Q9BQE6 289 aaPredicted RBP12.12□□□□□ -0.47
PRDM15-208ENST00000449395 PAGR1Q9BTK6 254 aa12.12□□□□□ -0.47
PRDM15-208ENST00000449395 UBA5Q9GZZ9 404 aa12.12□□□□□ -0.47
PRDM15-208ENST00000449395 CUL7Q14999 1698 aa12.12□□□□□ -0.47
PRDM15-208ENST00000449395 NCOA1Q15788 1441 aa12.12□□□□□ -0.47
PRDM15-208ENST00000449395 GOLIM4O00461 696 aa12.12□□□□□ -0.47
PRDM15-208ENST00000449395 URI1O94763 535 aaPredicted RBP12.12□□□□□ -0.47
PRDM15-208ENST00000449395 EZRP15311 586 aaKnown RBP12.12□□□□□ -0.47
PRDM15-208ENST00000449395 CETN2P41208 172 aa12.12□□□□□ -0.47
PRDM15-208ENST00000449395 DDX19AQ9NUU7 478 aaKnown RBP12.12□□□□□ -0.47
PRDM15-208ENST00000449395 SNRPA1P09661 255 aaKnown RBP12.12□□□□□ -0.47
PRDM15-208ENST00000449395 KIF4BQ2VIQ3 1234 aa12.12□□□□□ -0.47
PRDM15-208ENST00000449395 BMP2KLQ5H9B9 411 aa12.12□□□□□ -0.47
PRDM15-208ENST00000449395 SPTY2D1Q68D10 685 aaPredicted RBP12.12□□□□□ -0.47
PRDM15-208ENST00000449395 JCADQ9P266 1359 aa12.12□□□□□ -0.47
PRDM15-208ENST00000449395 CCDC194A0A1B0GVG4 234 aa12.11□□□□□ -0.47
PRDM15-208ENST00000449395 HOOK2Q96ED9 719 aa12.11□□□□□ -0.47
PRDM15-208ENST00000449395 MBIPQ9NS73 344 aa12.11□□□□□ -0.47
PRDM15-208ENST00000449395 ZBTB24O43167 697 aaPredicted RBP12.11□□□□□ -0.47
PRDM15-208ENST00000449395 USP25Q9UHP3 1055 aa12.11□□□□□ -0.47
PRDM15-208ENST00000449395 STX6O43752 255 aa12.11□□□□□ -0.47
PRDM15-208ENST00000449395 LDHAL6AQ6ZMR3 332 aa12.11□□□□□ -0.47
PRDM15-208ENST00000449395 TBX22Q9Y458 520 aa12.11□□□□□ -0.47
PRDM15-208ENST00000449395 TTF1Q15361 905 aaPredicted RBP12.11□□□□□ -0.47
PRDM15-208ENST00000449395 VPS36Q86VN1 386 aa12.11□□□□□ -0.47
PRDM15-208ENST00000449395 NUP88Q99567 741 aaPredicted RBP12.11□□□□□ -0.47
PRDM15-208ENST00000449395 GDPD2Q9HCC8 539 aa12.11□□□□□ -0.47
PRDM15-208ENST00000449395 TFIP11Q9UBB9 837 aaKnown RBP12.11□□□□□ -0.47
PRDM15-208ENST00000449395 ERICH4A6NGS2 130 aa12.11□□□□□ -0.47
PRDM15-208ENST00000449395 ADRA2BP18089 450 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms