RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 TDRD12Q587J7 1177 aaKnown RBP11.74□□□□□ -0.53
SCN10A-201ENST00000449082 TSHZ3Q63HK5 1081 aa11.74□□□□□ -0.53
SCN10A-201ENST00000449082 NFATC2IPQ8NCF5 419 aa11.74□□□□□ -0.53
SCN10A-201ENST00000449082 ZBTB43O43298 467 aa11.74□□□□□ -0.53
SCN10A-201ENST00000449082 HDAC1Q13547 482 aaPredicted RBP11.74□□□□□ -0.53
SCN10A-201ENST00000449082 MTHFSDQ2M296 383 aaKnown RBP11.74□□□□□ -0.53
SCN10A-201ENST00000449082 MCMDC2Q4G0Z9 681 aa11.74□□□□□ -0.53
SCN10A-201ENST00000449082 NPATQ14207 1427 aa11.73□□□□□ -0.53
SCN10A-201ENST00000449082 KLF18A0A0U1RQI7 1052 aa11.73□□□□□ -0.53
SCN10A-201ENST00000449082 SPDYE4A6NLX3 237 aa11.73□□□□□ -0.53
SCN10A-201ENST00000449082 ZC3H12CQ9C0D7 883 aaKnown RBP11.73□□□□□ -0.53
SCN10A-201ENST00000449082 GBP3Q9H0R5 595 aa11.73□□□□□ -0.53
SCN10A-201ENST00000449082 ZSCAN16Q9H4T2 348 aaPredicted RBP11.73□□□□□ -0.53
SCN10A-201ENST00000449082 PCDH11XQ9BZA7 1347 aa11.73□□□□□ -0.53
SCN10A-201ENST00000449082 PCDH11YQ9BZA8 1340 aa11.73□□□□□ -0.53
SCN10A-201ENST00000449082 BMP15O95972 392 aa11.73□□□□□ -0.53
SCN10A-201ENST00000449082 NUCB1Q02818 461 aa11.73□□□□□ -0.53
SCN10A-201ENST00000449082 NUP153P49790 1475 aaKnown RBP11.73□□□□□ -0.53
SCN10A-201ENST00000449082 TCERG1LQ5VWI1 586 aa11.73□□□□□ -0.53
SCN10A-201ENST00000449082 MRPL50Q8N5N7 158 aaKnown RBP11.73□□□□□ -0.53
SCN10A-201ENST00000449082 MAP3K5Q99683 1374 aa11.73□□□□□ -0.53
SCN10A-201ENST00000449082 NF2P35240 595 aa11.73□□□□□ -0.53
SCN10A-201ENST00000449082 UBXN4Q92575 508 aa11.73□□□□□ -0.53
SCN10A-201ENST00000449082 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.73□□□□□ -0.53
SCN10A-201ENST00000449082 POLKQ9UBT6 870 aa11.73□□□□□ -0.53
SCN10A-201ENST00000449082 BRPF3Q9ULD4 1205 aa11.73□□□□□ -0.53
SCN10A-201ENST00000449082 IQSEC3Q9UPP2 1182 aaPredicted RBP11.73□□□□□ -0.53
SCN10A-201ENST00000449082 CLEC11AQ9Y240 323 aa11.73□□□□□ -0.53
SCN10A-201ENST00000449082 TBCAO75347 108 aaKnown RBP11.73□□□□□ -0.53
SCN10A-201ENST00000449082 GCP02774 474 aa11.73□□□□□ -0.53
SCN10A-201ENST00000449082 PLCG2P16885 1265 aa11.73□□□□□ -0.53
SCN10A-201ENST00000449082 SSFA2P28290 1259 aa11.73□□□□□ -0.53
SCN10A-201ENST00000449082 TRMT1LQ7Z2T5 733 aaKnown RBP11.73□□□□□ -0.53
SCN10A-201ENST00000449082 TRAPPC8Q9Y2L5 1435 aa11.73□□□□□ -0.53
SCN10A-201ENST00000449082 LMTK3Q96Q04 1460 aa11.72□□□□□ -0.53
SCN10A-201ENST00000449082 CASQ1P31415 396 aa11.72□□□□□ -0.53
SCN10A-201ENST00000449082 PICALMQ13492 652 aa11.72□□□□□ -0.53
SCN10A-201ENST00000449082 STX1AQ16623 288 aa11.72□□□□□ -0.53
SCN10A-201ENST00000449082 RAB11FIP4Q86YS3 637 aa11.72□□□□□ -0.53
SCN10A-201ENST00000449082 LINS1Q8NG48 757 aa11.72□□□□□ -0.53
SCN10A-201ENST00000449082 ANKRD2Q9GZV1 360 aa11.72□□□□□ -0.53
SCN10A-201ENST00000449082 TFIP11Q9UBB9 837 aaKnown RBP11.72□□□□□ -0.53
SCN10A-201ENST00000449082 MAGEB6P1A0A0J9YX57 407 aa11.72□□□□□ -0.53
SCN10A-201ENST00000449082 PTPN14Q15678 1187 aa11.72□□□□□ -0.53
SCN10A-201ENST00000449082 CCDC102BQ68D86 513 aa11.72□□□□□ -0.53
SCN10A-201ENST00000449082 ANKRD44Q8N8A2 993 aa11.72□□□□□ -0.53
SCN10A-201ENST00000449082 DRC1Q96MC2 740 aa11.72□□□□□ -0.53
SCN10A-201ENST00000449082 PRAG1Q86YV5 1406 aa11.72□□□□□ -0.53
SCN10A-201ENST00000449082 GNAT2P19087 354 aa11.72□□□□□ -0.53
SCN10A-201ENST00000449082 RBM25P49756 843 aaKnown RBP11.72□□□□□ -0.53
SCN10A-201ENST00000449082 RTN1Q16799 776 aa11.72□□□□□ -0.53
SCN10A-201ENST00000449082 SLC9C2Q5TAH2 1124 aa11.72□□□□□ -0.53
SCN10A-201ENST00000449082 CKAP2LQ8IYA6 745 aa11.72□□□□□ -0.53
SCN10A-201ENST00000449082 EYA3Q99504 573 aa11.72□□□□□ -0.53
SCN10A-201ENST00000449082 CLIP2Q9UDT6 1046 aa11.72□□□□□ -0.53
SCN10A-201ENST00000449082 C8orf58Q8NAV2 365 aa11.72□□□□□ -0.53
SCN10A-201ENST00000449082 ZMYM3Q14202 1370 aa11.72□□□□□ -0.53
SCN10A-201ENST00000449082 IRS4O14654 1257 aaPredicted RBP11.71□□□□□ -0.53
SCN10A-201ENST00000449082 JDP2Q8WYK2 163 aa11.71□□□□□ -0.53
SCN10A-201ENST00000449082 CDCA7Q9BWT1 371 aaPredicted RBP11.71□□□□□ -0.53
SCN10A-201ENST00000449082 RMND1Q9NWS8 449 aa11.71□□□□□ -0.53
SCN10A-201ENST00000449082 BRF1Q92994 677 aa11.71□□□□□ -0.53
SCN10A-201ENST00000449082 TBC1D2Q9BYX2 928 aa11.71□□□□□ -0.53
SCN10A-201ENST00000449082 ZFYVE9O95405 1425 aa11.71□□□□□ -0.53
SCN10A-201ENST00000449082 BICD1Q96G01 975 aa11.71□□□□□ -0.53
SCN10A-201ENST00000449082 CTTNBP2Q8WZ74 1663 aa11.71□□□□□ -0.53
SCN10A-201ENST00000449082 KIF4BQ2VIQ3 1234 aa11.71□□□□□ -0.54
SCN10A-201ENST00000449082 CCDC102AQ96A19 550 aa11.71□□□□□ -0.54
SCN10A-201ENST00000449082 CCDC97Q96F63 343 aaPredicted RBP11.71□□□□□ -0.54
SCN10A-201ENST00000449082 ZRANB1Q9UGI0 708 aa11.71□□□□□ -0.54
SCN10A-201ENST00000449082 B4DLN1 442 aa11.71□□□□□ -0.54
SCN10A-201ENST00000449082 PAFAH1B1P43034 410 aa11.71□□□□□ -0.54
SCN10A-201ENST00000449082 MRPL12P52815 198 aaKnown RBP11.71□□□□□ -0.54
SCN10A-201ENST00000449082 HSPA2P54652 639 aa11.71□□□□□ -0.54
SCN10A-201ENST00000449082 PDE1AP54750 535 aa11.71□□□□□ -0.54
SCN10A-201ENST00000449082 CCDC174Q6PII3 467 aa11.71□□□□□ -0.54
SCN10A-201ENST00000449082 LUZP1Q86V48 1076 aa11.71□□□□□ -0.54
SCN10A-201ENST00000449082 EXOC1Q9NV70 894 aa11.71□□□□□ -0.54
SCN10A-201ENST00000449082 PAG1Q9NWQ8 432 aa11.71□□□□□ -0.54
SCN10A-201ENST00000449082 SDSP20132 328 aa11.7□□□□□ -0.54
SCN10A-201ENST00000449082 MCM3P25205 808 aa11.7□□□□□ -0.54
SCN10A-201ENST00000449082 USP8P40818 1118 aa11.7□□□□□ -0.54
SCN10A-201ENST00000449082 CPLX3Q8WVH0 158 aa11.7□□□□□ -0.54
SCN10A-201ENST00000449082 IP6K1Q92551 441 aa11.7□□□□□ -0.54
SCN10A-201ENST00000449082 PANK2Q9BZ23 570 aa11.7□□□□□ -0.54
SCN10A-201ENST00000449082 PRC1O43663 620 aa11.7□□□□□ -0.54
SCN10A-201ENST00000449082 HEATR3Q7Z4Q2 680 aa11.7□□□□□ -0.54
SCN10A-201ENST00000449082 CCDC91Q7Z6B0 441 aa11.7□□□□□ -0.54
SCN10A-201ENST00000449082 CTNNBL1Q8WYA6 563 aaPredicted RBP11.7□□□□□ -0.54
SCN10A-201ENST00000449082 TNPO1Q92973 898 aaKnown RBP11.7□□□□□ -0.54
SCN10A-201ENST00000449082 CRACR2AQ9BSW2 395 aa11.7□□□□□ -0.54
SCN10A-201ENST00000449082 ALG1Q9BT22 464 aa11.7□□□□□ -0.54
SCN10A-201ENST00000449082 POLR3AO14802 1390 aaPredicted RBP11.7□□□□□ -0.54
SCN10A-201ENST00000449082 MAP9Q49MG5 647 aa11.7□□□□□ -0.54
SCN10A-201ENST00000449082 TBX22Q9Y458 520 aa11.7□□□□□ -0.54
SCN10A-201ENST00000449082 RBM8AQ9Y5S9 174 aaKnown RBP11.7□□□□□ -0.54
SCN10A-201ENST00000449082 EIF4G3O43432 1585 aaKnown RBP11.7□□□□□ -0.54
SCN10A-201ENST00000449082 CTNNA2P26232 953 aa11.7□□□□□ -0.54
SCN10A-201ENST00000449082 TAF3Q5VWG9 929 aa11.7□□□□□ -0.54
SCN10A-201ENST00000449082 VEZTQ9HBM0 779 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms