RNA–Protein interactions for RNA: ENST00000448693.2

SPCS1-203, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 2

Gene SPCS1, Length 826 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-203ENST00000448693 COL4A1P02462 1669 aa13□□□□□ -0.33
SPCS1-203ENST00000448693 PDIA6Q15084 440 aa13□□□□□ -0.33
SPCS1-203ENST00000448693 PRPF40BQ6NWY9 871 aaKnown RBP13□□□□□ -0.33
SPCS1-203ENST00000448693 CLEC4GQ6UXB4 293 aa13□□□□□ -0.33
SPCS1-203ENST00000448693 KIF6Q6ZMV9 814 aa13□□□□□ -0.33
SPCS1-203ENST00000448693 NUTM1Q86Y26 1132 aa13□□□□□ -0.33
SPCS1-203ENST00000448693 SPEF2Q9C093 1822 aa12.99□□□□□ -0.33
SPCS1-203ENST00000448693 SEMA3EO15041 775 aa12.99□□□□□ -0.33
SPCS1-203ENST00000448693 SRGNP10124 158 aa12.99□□□□□ -0.33
SPCS1-203ENST00000448693 ZEB1P37275 1124 aaPredicted RBP12.99□□□□□ -0.33
SPCS1-203ENST00000448693 FOXK1P85037 733 aa12.99□□□□□ -0.33
SPCS1-203ENST00000448693 OLFM4Q6UX06 510 aa12.99□□□□□ -0.33
SPCS1-203ENST00000448693 ARIH1Q9Y4X5 557 aaPredicted RBP12.99□□□□□ -0.33
SPCS1-203ENST00000448693 LRRC37AA6NMS7 1700 aa12.99□□□□□ -0.33
SPCS1-203ENST00000448693 COL4A5P29400 1685 aa12.99□□□□□ -0.33
SPCS1-203ENST00000448693 IBTKQ9P2D0 1353 aaPredicted RBP12.98□□□□□ -0.33
SPCS1-203ENST00000448693 ERBB4Q15303 1308 aa12.98□□□□□ -0.33
SPCS1-203ENST00000448693 ZNF428Q96B54 188 aa12.98□□□□□ -0.33
SPCS1-203ENST00000448693 RIC1Q4ADV7 1423 aa12.97□□□□□ -0.33
SPCS1-203ENST00000448693 SNED1Q8TER0 1413 aa12.97□□□□□ -0.33
SPCS1-203ENST00000448693 CEP350Q5VT06 3117 aa12.97□□□□□ -0.33
SPCS1-203ENST00000448693 CHL1O00533 1208 aa12.97□□□□□ -0.33
SPCS1-203ENST00000448693 APAF1O14727 1248 aa12.97□□□□□ -0.33
SPCS1-203ENST00000448693 LMNB1P20700 586 aa12.97□□□□□ -0.33
SPCS1-203ENST00000448693 ERFEQ4G0M1 354 aa12.97□□□□□ -0.33
SPCS1-203ENST00000448693 STYK1Q6J9G0 422 aa12.97□□□□□ -0.33
SPCS1-203ENST00000448693 EMILIN3Q9NT22 766 aa12.97□□□□□ -0.33
SPCS1-203ENST00000448693 CHPF2Q9P2E5 772 aa12.97□□□□□ -0.33
SPCS1-203ENST00000448693 ERVV-1B6SEH8 477 aa12.96□□□□□ -0.33
SPCS1-203ENST00000448693 NTSR2O95665 410 aa12.96□□□□□ -0.33
SPCS1-203ENST00000448693 SUSD4Q5VX71 490 aa12.96□□□□□ -0.33
SPCS1-203ENST00000448693 C3orf67Q6ZVT6 689 aa12.96□□□□□ -0.33
SPCS1-203ENST00000448693 MASTLQ96GX5 879 aa12.96□□□□□ -0.33
SPCS1-203ENST00000448693 MBIPQ9NS73 344 aa12.96□□□□□ -0.33
SPCS1-203ENST00000448693 AIMP1Q12904 312 aaKnown RBP12.95□□□□□ -0.34
SPCS1-203ENST00000448693 TPTE2Q6XPS3 522 aa12.95□□□□□ -0.34
SPCS1-203ENST00000448693 GIGYF2Q6Y7W6 1299 aaKnown RBP12.95□□□□□ -0.34
SPCS1-203ENST00000448693 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.95□□□□□ -0.34
SPCS1-203ENST00000448693 PLPP6Q8IY26 295 aa12.95□□□□□ -0.34
SPCS1-203ENST00000448693 XAGE3Q8WTP9 111 aa12.95□□□□□ -0.34
SPCS1-203ENST00000448693 CNKSR1Q969H4 720 aa12.95□□□□□ -0.34
SPCS1-203ENST00000448693 BABAM1Q9NWV8 329 aa12.95□□□□□ -0.34
SPCS1-203ENST00000448693 MYH3P11055 1940 aa12.94□□□□□ -0.34
SPCS1-203ENST00000448693 NPR1P16066 1061 aa12.94□□□□□ -0.34
SPCS1-203ENST00000448693 GTF2E1P29083 439 aaPredicted RBP12.94□□□□□ -0.34
SPCS1-203ENST00000448693 HDGFL1Q5TGJ6 251 aa12.94□□□□□ -0.34
SPCS1-203ENST00000448693 ZNF34Q8IZ26 560 aa12.94□□□□□ -0.34
SPCS1-203ENST00000448693 TAOK3Q9H2K8 898 aa12.94□□□□□ -0.34
SPCS1-203ENST00000448693 PDZRN3Q9UPQ7 1066 aa12.94□□□□□ -0.34
SPCS1-203ENST00000448693 LTBP1Q14766 1721 aa12.93□□□□□ -0.34
SPCS1-203ENST00000448693 KDM2BQ8NHM5 1336 aa12.93□□□□□ -0.34
SPCS1-203ENST00000448693 SCN4AP35499 1836 aa12.93□□□□□ -0.34
SPCS1-203ENST00000448693 TESPA1A2RU30 521 aaPredicted RBP12.93□□□□□ -0.34
SPCS1-203ENST00000448693 KLRG2A4D1S0 409 aaPredicted RBP12.93□□□□□ -0.34
SPCS1-203ENST00000448693 ZNF316A6NFI3 1004 aaPredicted RBP12.93□□□□□ -0.34
SPCS1-203ENST00000448693 COPS6Q7L5N1 327 aa12.93□□□□□ -0.34
SPCS1-203ENST00000448693 NYXQ9GZU5 481 aa12.93□□□□□ -0.34
SPCS1-203ENST00000448693 RRAGCQ9HB90 399 aa12.93□□□□□ -0.34
SPCS1-203ENST00000448693 DUOX1Q9NRD9 1551 aa12.93□□□□□ -0.34
SPCS1-203ENST00000448693 LTBP3Q9NS15 1303 aa12.92□□□□□ -0.34
SPCS1-203ENST00000448693 ZC3H4Q9UPT8 1303 aaKnown RBP12.92□□□□□ -0.34
SPCS1-203ENST00000448693 ADAMTSL1Q8N6G6 1762 aa12.92□□□□□ -0.34
SPCS1-203ENST00000448693 HSPA6P17066 643 aa12.92□□□□□ -0.34
SPCS1-203ENST00000448693 CRY2Q49AN0 593 aa12.92□□□□□ -0.34
SPCS1-203ENST00000448693 CCDC93Q567U6 631 aa12.92□□□□□ -0.34
SPCS1-203ENST00000448693 C7orf43Q8WVR3 580 aa12.92□□□□□ -0.34
SPCS1-203ENST00000448693 DDX21Q9NR30 783 aaKnown RBP eCLIP12.92□□□□□ -0.34
SPCS1-203ENST00000448693 ZNF853P0CG23 659 aa12.91□□□□□ -0.34
SPCS1-203ENST00000448693 DUSP27Q5VZP5 1158 aa12.91□□□□□ -0.34
SPCS1-203ENST00000448693 SYNE4Q8N205 404 aa12.91□□□□□ -0.34
SPCS1-203ENST00000448693 ZNF277Q9NRM2 450 aaPredicted RBP12.91□□□□□ -0.34
SPCS1-203ENST00000448693 ZNF541Q9H0D2 1346 aa12.9□□□□□ -0.34
SPCS1-203ENST00000448693 GLTPD2A6NH11 291 aa12.9□□□□□ -0.34
SPCS1-203ENST00000448693 ELL2O00472 640 aaPredicted RBP12.9□□□□□ -0.34
SPCS1-203ENST00000448693 DPYSL4O14531 572 aa12.9□□□□□ -0.34
SPCS1-203ENST00000448693 TCERG1O14776 1098 aaKnown RBP12.9□□□□□ -0.34
SPCS1-203ENST00000448693 TOMM70O94826 608 aa12.9□□□□□ -0.34
SPCS1-203ENST00000448693 TSR2Q969E8 191 aaKnown RBP12.9□□□□□ -0.34
SPCS1-203ENST00000448693 MRS2Q9HD23 443 aa12.9□□□□□ -0.34
SPCS1-203ENST00000448693 IFT57Q9NWB7 429 aa12.9□□□□□ -0.34
SPCS1-203ENST00000448693 HTRA3P83110 453 aa12.89□□□□□ -0.35
SPCS1-203ENST00000448693 FKBP4Q02790 459 aaKnown RBP eCLIP12.89□□□□□ -0.35
SPCS1-203ENST00000448693 PARP10Q53GL7 1025 aa12.89□□□□□ -0.35
SPCS1-203ENST00000448693 NLRP10Q86W26 655 aa12.89□□□□□ -0.35
SPCS1-203ENST00000448693 C16orf71Q8IYS4 520 aaPredicted RBP12.89□□□□□ -0.35
SPCS1-203ENST00000448693 RPGRQ92834 1020 aaKnown RBP12.89□□□□□ -0.35
SPCS1-203ENST00000448693 CACNA1FO60840 1977 aa12.89□□□□□ -0.35
SPCS1-203ENST00000448693 ABCC4O15439 1325 aa12.88□□□□□ -0.35
SPCS1-203ENST00000448693 POTECB2RU33 542 aa12.88□□□□□ -0.35
SPCS1-203ENST00000448693 HOXB7P09629 217 aa12.88□□□□□ -0.35
SPCS1-203ENST00000448693 HCLS1P14317 486 aaPredicted RBP12.88□□□□□ -0.35
SPCS1-203ENST00000448693 SOGA3Q5TF21 947 aa12.88□□□□□ -0.35
SPCS1-203ENST00000448693 PPP1R42Q7Z4L9 355 aa12.88□□□□□ -0.35
SPCS1-203ENST00000448693 C8orf58Q8NAV2 365 aa12.88□□□□□ -0.35
SPCS1-203ENST00000448693 RBM46Q8TBY0 533 aaKnown RBP12.88□□□□□ -0.35
SPCS1-203ENST00000448693 UTP14AQ9BVJ6 771 aaKnown RBP12.88□□□□□ -0.35
SPCS1-203ENST00000448693 A0A1B0GUL6 1792 aa12.88□□□□□ -0.35
SPCS1-203ENST00000448693 ATP5J2-PTCD1G3V325 749 aa12.87□□□□□ -0.35
SPCS1-203ENST00000448693 PPEF1O14829 653 aaPredicted RBP12.87□□□□□ -0.35
SPCS1-203ENST00000448693 ANP32CO43423 234 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms