RNA–Protein interactions for RNA: ENST00000448637.5

LPP-208, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 5 BASIC

Gene LPP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-208ENST00000448637 GTF2F1P35269 517 aaKnown RBP eCLIP9.43□□□□□ -0.93e-6■■■■□ 22.4
LPP-208ENST00000448637 CFAP70Q5T0N1 1121 aa9.43□□□□□ -0.9
LPP-208ENST00000448637 ATAD2Q6PL18 1390 aa9.43□□□□□ -0.9
LPP-208ENST00000448637 TACC1O75410 805 aa9.43□□□□□ -0.9
LPP-208ENST00000448637 GUCY1B3Q02153 619 aa9.43□□□□□ -0.9
LPP-208ENST00000448637 CWC25Q9NXE8 425 aaPredicted RBP9.43□□□□□ -0.9
LPP-208ENST00000448637 SWAP70Q9UH65 585 aa9.43□□□□□ -0.9
LPP-208ENST00000448637 LIMCH1Q9UPQ0 1083 aa9.43□□□□□ -0.9
LPP-208ENST00000448637 ATP2C2O75185 946 aa9.43□□□□□ -0.9
LPP-208ENST00000448637 UQCRFS1P1P0C7P4 283 aa9.43□□□□□ -0.9
LPP-208ENST00000448637 ZC3H6P61129 1189 aaKnown RBP9.43□□□□□ -0.9
LPP-208ENST00000448637 NBPF1Q3BBV0 1214 aa9.43□□□□□ -0.9
LPP-208ENST00000448637 CEP128Q6ZU80 1094 aa9.43□□□□□ -0.9
LPP-208ENST00000448637 AFAP1L2Q8N4X5 818 aa9.43□□□□□ -0.9
LPP-208ENST00000448637 HAUS2Q9NVX0 235 aa9.43□□□□□ -0.9
LPP-208ENST00000448637 TACC3Q9Y6A5 838 aa9.43□□□□□ -0.9
LPP-208ENST00000448637 SLC8A3P57103 927 aa9.42□□□□□ -0.9
LPP-208ENST00000448637 CUL4BQ13620 913 aa9.42□□□□□ -0.9
LPP-208ENST00000448637 CCDC50Q8IVM0 306 aa9.42□□□□□ -0.9
LPP-208ENST00000448637 OGFOD1Q8N543 542 aa9.42□□□□□ -0.9
LPP-208ENST00000448637 SLC52A1Q9NWF4 448 aa9.42□□□□□ -0.9
LPP-208ENST00000448637 USP16Q9Y5T5 823 aa9.42□□□□□ -0.9
LPP-208ENST00000448637 IVLP07476 585 aa9.42□□□□□ -0.9
LPP-208ENST00000448637 ZFYP08048 801 aaPredicted RBP9.42□□□□□ -0.9
LPP-208ENST00000448637 SETDB1Q15047 1291 aa9.42□□□□□ -0.9
LPP-208ENST00000448637 NFE2L2Q16236 605 aa9.42□□□□□ -0.9
LPP-208ENST00000448637 PPFIBP2Q8ND30 876 aa9.42□□□□□ -0.9
LPP-208ENST00000448637 SMARCC2Q8TAQ2 1214 aa9.42□□□□□ -0.9
LPP-208ENST00000448637 HYPKQ9NX55 129 aa9.42□□□□□ -0.9
LPP-208ENST00000448637 METAP2P50579 478 aaKnown RBP eCLIP9.42□□□□□ -0.9
LPP-208ENST00000448637 GRM1Q13255 1194 aa9.42□□□□□ -0.9
LPP-208ENST00000448637 MAK16Q9BXY0 300 aaKnown RBP9.42□□□□□ -0.9
LPP-208ENST00000448637 TMX1Q9H3N1 280 aa9.42□□□□□ -0.9
LPP-208ENST00000448637 TOP2AP11388 1531 aaKnown RBP9.42□□□□□ -0.9
LPP-208ENST00000448637 CTAGE15A4D2H0 777 aa9.42□□□□□ -0.9
LPP-208ENST00000448637 EXOC5O00471 708 aa9.42□□□□□ -0.9
LPP-208ENST00000448637 LPXNO60711 386 aa9.42□□□□□ -0.9
LPP-208ENST00000448637 CIB2O75838 187 aa9.42□□□□□ -0.9
LPP-208ENST00000448637 CTAGE8P0CG41 777 aa9.42□□□□□ -0.9
LPP-208ENST00000448637 CTAGE6Q86UF2 777 aa9.42□□□□□ -0.9
LPP-208ENST00000448637 CTAGE4Q8IX94 777 aa9.42□□□□□ -0.9
LPP-208ENST00000448637 TMTC2Q8N394 836 aa9.42□□□□□ -0.9
LPP-208ENST00000448637 NCOA7Q8NI08 942 aa9.42□□□□□ -0.9
LPP-208ENST00000448637 TRMT1Q9NXH9 659 aaKnown RBP9.42□□□□□ -0.9
LPP-208ENST00000448637 RRAGBQ5VZM2 374 aa9.41□□□□□ -0.9
LPP-208ENST00000448637 TTC36A6NLP5 189 aa9.41□□□□□ -0.9
LPP-208ENST00000448637 GJC1P36383 396 aa9.41□□□□□ -0.9
LPP-208ENST00000448637 GNG11P61952 73 aa9.41□□□□□ -0.9
LPP-208ENST00000448637 MTRF1LQ9UGC7 380 aaKnown RBP9.41□□□□□ -0.9
LPP-208ENST00000448637 STAT6P42226 847 aa9.41□□□□□ -0.9
LPP-208ENST00000448637 SMAP1Q8IYB5 467 aaPredicted RBP9.41□□□□□ -0.9
LPP-208ENST00000448637 VPS52Q8N1B4 723 aa9.41□□□□□ -0.9
LPP-208ENST00000448637 EVI5LQ96CN4 794 aa9.41□□□□□ -0.9
LPP-208ENST00000448637 NGLY1Q96IV0 654 aa9.41□□□□□ -0.9
LPP-208ENST00000448637 BIN2Q9UBW5 565 aaPredicted RBP9.41□□□□□ -0.9
LPP-208ENST00000448637 GIPC1O14908 333 aa9.41□□□□□ -0.9
LPP-208ENST00000448637 CASQ2O14958 399 aaPredicted RBP9.41□□□□□ -0.9
LPP-208ENST00000448637 TSPY3P0CV98 308 aa9.41□□□□□ -0.9
LPP-208ENST00000448637 TSPY8P0CW00 308 aa9.41□□□□□ -0.9
LPP-208ENST00000448637 RFC4P35249 363 aa9.41□□□□□ -0.9
LPP-208ENST00000448637 GEN1Q17RS7 908 aa9.41□□□□□ -0.9
LPP-208ENST00000448637 DUSP27Q5VZP5 1158 aa9.41□□□□□ -0.9
LPP-208ENST00000448637 KRT23Q9C075 422 aa9.41□□□□□ -0.9
LPP-208ENST00000448637 EXOC6BQ9Y2D4 811 aa9.41□□□□□ -0.9
LPP-208ENST00000448637 TAF7Q15545 349 aaPredicted RBP9.41□□□□□ -0.9
LPP-208ENST00000448637 INF2Q27J81 1249 aa9.41□□□□□ -0.9
LPP-208ENST00000448637 CCDC121Q6ZUS5 278 aa9.41□□□□□ -0.9
LPP-208ENST00000448637 RSPH3Q86UC2 560 aa9.41□□□□□ -0.9
LPP-208ENST00000448637 GOLGA1Q92805 767 aa9.41□□□□□ -0.9
LPP-208ENST00000448637 CSRNP2Q9H175 543 aa9.41□□□□□ -0.9
LPP-208ENST00000448637 PAXBP1Q9Y5B6 917 aa9.41□□□□□ -0.9
LPP-208ENST00000448637 TUBB4BP68371 445 aa9.4□□□□□ -0.9
LPP-208ENST00000448637 IRX3P78415 501 aaPredicted RBP9.4□□□□□ -0.9
LPP-208ENST00000448637 DPH6Q7L8W6 267 aa9.4□□□□□ -0.9
LPP-208ENST00000448637 ATRIPQ8WXE1 791 aa9.4□□□□□ -0.9
LPP-208ENST00000448637 RAD54L2Q9Y4B4 1467 aa9.4□□□□□ -0.9
LPP-208ENST00000448637 CADPSQ9ULU8 1353 aa9.4□□□□□ -0.9
LPP-208ENST00000448637 PSMA7O14818 248 aa9.4□□□□□ -0.9
LPP-208ENST00000448637 ORC3Q9UBD5 711 aaPredicted RBP9.4□□□□□ -0.9
LPP-208ENST00000448637 ATP6V0A2Q9Y487 856 aa9.4□□□□□ -0.9
LPP-208ENST00000448637 KRT83P78385 493 aa9.4□□□□□ -0.9
LPP-208ENST00000448637 CLUL1Q15846 466 aa9.4□□□□□ -0.9
LPP-208ENST00000448637 BRDTQ58F21 947 aaPredicted RBP9.4□□□□□ -0.9
LPP-208ENST00000448637 ARFGAP2Q8N6H7 521 aa9.4□□□□□ -0.9
LPP-208ENST00000448637 CEP120Q8N960 986 aa9.4□□□□□ -0.9
LPP-208ENST00000448637 SELENOSQ9BQE4 189 aa9.4□□□□□ -0.9
LPP-208ENST00000448637 SLC26A6Q9BXS9 759 aa9.4□□□□□ -0.9
LPP-208ENST00000448637 ANKRD50Q9ULJ7 1429 aa9.4□□□□□ -0.9
LPP-208ENST00000448637 MPRIPQ6WCQ1 1025 aa9.4□□□□□ -0.91
LPP-208ENST00000448637 HS2ST1Q7LGA3 356 aa9.4□□□□□ -0.91
LPP-208ENST00000448637 HMG20BQ9P0W2 317 aa9.4□□□□□ -0.91
LPP-208ENST00000448637 MTUS1Q9ULD2 1270 aa9.4□□□□□ -0.91
LPP-208ENST00000448637 CCDC171Q6TFL3 1326 aa9.4□□□□□ -0.91
LPP-208ENST00000448637 MROH2BQ7Z745 1585 aa9.39□□□□□ -0.91
LPP-208ENST00000448637 TUBB4AP04350 444 aa9.39□□□□□ -0.91
LPP-208ENST00000448637 CCT2P78371 535 aaKnown RBP9.39□□□□□ -0.91
LPP-208ENST00000448637 XPCQ01831 940 aaPredicted RBP9.39□□□□□ -0.91
LPP-208ENST00000448637 TBC1D31Q96DN5 1066 aa9.39□□□□□ -0.91
LPP-208ENST00000448637 FAM212AQ96EL1 285 aa9.39□□□□□ -0.91
LPP-208ENST00000448637 RBM27Q9P2N5 1060 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms