RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 H7C1W4 665 aa22.31■■□□□ 1.16
HLCS-205ENST00000448340 HSPA1AP0DMV8 641 aaKnown RBP22.31■■□□□ 1.16
HLCS-205ENST00000448340 HSPA1BP0DMV9 641 aaKnown RBP22.31■■□□□ 1.16
HLCS-205ENST00000448340 HSP90B1P14625 803 aaKnown RBP22.31■■□□□ 1.16
HLCS-205ENST00000448340 SYNE4Q8N205 404 aa22.31■■□□□ 1.16
HLCS-205ENST00000448340 CDHR2Q9BYE9 1310 aa22.31■■□□□ 1.16
HLCS-205ENST00000448340 IRS4O14654 1257 aaPredicted RBP22.3■■□□□ 1.16
HLCS-205ENST00000448340 RTL5Q5HYW3 569 aaPredicted RBP22.3■■□□□ 1.16
HLCS-205ENST00000448340 INTS3Q68E01 1043 aaKnown RBP22.3■■□□□ 1.16
HLCS-205ENST00000448340 CAPN15O75808 1086 aa22.29■■□□□ 1.16
HLCS-205ENST00000448340 MS4A1P11836 297 aa22.29■■□□□ 1.16
HLCS-205ENST00000448340 DZIP1LQ8IYY4 767 aaKnown RBP22.29■■□□□ 1.16
HLCS-205ENST00000448340 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.29■■□□□ 1.16
HLCS-205ENST00000448340 CLUAP1Q96AJ1 413 aa22.29■■□□□ 1.16
HLCS-205ENST00000448340 NLRP3Q96P20 1036 aa22.29■■□□□ 1.16
HLCS-205ENST00000448340 C9orf78Q9NZ63 289 aaPredicted RBP22.29■■□□□ 1.16
HLCS-205ENST00000448340 TNNQ9UQP3 1299 aa22.29■■□□□ 1.16
HLCS-205ENST00000448340 GRM8O00222 908 aa22.28■■□□□ 1.16
HLCS-205ENST00000448340 C21orf2O43822 256 aa22.28■■□□□ 1.16
HLCS-205ENST00000448340 HCLS1P14317 486 aaPredicted RBP22.28■■□□□ 1.16
HLCS-205ENST00000448340 DPY19L2Q6NUT2 758 aa22.28■■□□□ 1.16
HLCS-205ENST00000448340 UBE3BQ7Z3V4 1068 aa22.28■■□□□ 1.16
HLCS-205ENST00000448340 FTSJ3Q8IY81 847 aaKnown RBP22.28■■□□□ 1.16
HLCS-205ENST00000448340 JARID2Q92833 1246 aaPredicted RBP22.28■■□□□ 1.16
HLCS-205ENST00000448340 CASP7P55210 303 aa22.27■■□□□ 1.16
HLCS-205ENST00000448340 DDX60Q8IY21 1712 aaKnown RBP22.27■■□□□ 1.16
HLCS-205ENST00000448340 ZNF622Q969S3 477 aaKnown RBP eCLIP22.27■■□□□ 1.16
HLCS-205ENST00000448340 LTBP3Q9NS15 1303 aa22.27■■□□□ 1.16
HLCS-205ENST00000448340 LAMB2P55268 1798 aa22.26■■□□□ 1.15
HLCS-205ENST00000448340 SRGNP10124 158 aa22.26■■□□□ 1.15
HLCS-205ENST00000448340 CRY2Q49AN0 593 aa22.26■■□□□ 1.15
HLCS-205ENST00000448340 UTYO14607 1347 aa22.26■■□□□ 1.15
HLCS-205ENST00000448340 TIAM2Q8IVF5 1701 aa22.26■■□□□ 1.15
HLCS-205ENST00000448340 PLIN1O60240 522 aa22.25■■□□□ 1.15
HLCS-205ENST00000448340 PDE8AO60658 829 aa22.25■■□□□ 1.15
HLCS-205ENST00000448340 TMEM57Q8N5G2 664 aa22.25■■□□□ 1.15
HLCS-205ENST00000448340 PLA2G12BQ9BX93 195 aa22.25■■□□□ 1.15
HLCS-205ENST00000448340 USP44Q9H0E7 712 aa22.25■■□□□ 1.15
HLCS-205ENST00000448340 NPR1P16066 1061 aa22.24■■□□□ 1.15
HLCS-205ENST00000448340 C3orf67Q6ZVT6 689 aa22.24■■□□□ 1.15
HLCS-205ENST00000448340 MASTLQ96GX5 879 aa22.24■■□□□ 1.15
HLCS-205ENST00000448340 ZNF219Q9P2Y4 722 aaPredicted RBP22.24■■□□□ 1.15
HLCS-205ENST00000448340 COL11A2P13942 1736 aaPredicted RBP22.23■■□□□ 1.15
HLCS-205ENST00000448340 NBPF7P0C2Y1 421 aaPredicted RBP22.23■■□□□ 1.15
HLCS-205ENST00000448340 POTEIP0CG38 1075 aa22.23■■□□□ 1.15
HLCS-205ENST00000448340 POTEJP0CG39 1038 aa22.23■■□□□ 1.15
HLCS-205ENST00000448340 RLBP1P12271 317 aa22.23■■□□□ 1.15
HLCS-205ENST00000448340 SF3B3Q15393 1217 aaKnown RBP22.23■■□□□ 1.15
HLCS-205ENST00000448340 STYK1Q6J9G0 422 aa22.23■■□□□ 1.15
HLCS-205ENST00000448340 HOXA10P31260 410 aaPredicted RBP22.22■■□□□ 1.15
HLCS-205ENST00000448340 PDE3AQ14432 1141 aa22.22■■□□□ 1.15
HLCS-205ENST00000448340 RPGRQ92834 1020 aaKnown RBP22.22■■□□□ 1.15
HLCS-205ENST00000448340 CREBZFQ9NS37 354 aa22.22■■□□□ 1.15
HLCS-205ENST00000448340 CCDC88AQ3V6T2 1871 aa22.22■■□□□ 1.15
HLCS-205ENST00000448340 DDNO94850 711 aaPredicted RBP22.21■■□□□ 1.15
HLCS-205ENST00000448340 CHADLQ6NUI6 762 aa22.21■■□□□ 1.15
HLCS-205ENST00000448340 PANK1Q8TE04 598 aa22.21■■□□□ 1.15
HLCS-205ENST00000448340 FER1L6Q2WGJ9 1857 aa22.21■■□□□ 1.15
HLCS-205ENST00000448340 MYH3P11055 1940 aa22.21■■□□□ 1.15
HLCS-205ENST00000448340 RRP1P56182 461 aaKnown RBP22.2■■□□□ 1.14
HLCS-205ENST00000448340 CTSWP56202 376 aa22.2■■□□□ 1.14
HLCS-205ENST00000448340 C7orf43Q8WVR3 580 aa22.2■■□□□ 1.14
HLCS-205ENST00000448340 CNKSR1Q969H4 720 aa22.2■■□□□ 1.14
HLCS-205ENST00000448340 RBM17Q96I25 401 aaKnown RBP22.2■■□□□ 1.14
HLCS-205ENST00000448340 TAOK3Q9H2K8 898 aa22.2■■□□□ 1.14
HLCS-205ENST00000448340 ALDH1B1P30837 517 aa22.19■■□□□ 1.14
HLCS-205ENST00000448340 CCDC152Q4G0S7 254 aa22.19■■□□□ 1.14
HLCS-205ENST00000448340 PRPF40BQ6NWY9 871 aaKnown RBP22.19■■□□□ 1.14
HLCS-205ENST00000448340 ITPRIPQ8IWB1 547 aa22.19■■□□□ 1.14
HLCS-205ENST00000448340 CRAMP1Q96RY5 1269 aa22.19■■□□□ 1.14
HLCS-205ENST00000448340 HDAC5Q9UQL6 1122 aa22.19■■□□□ 1.14
HLCS-205ENST00000448340 GNAI3P08754 354 aa22.18■■□□□ 1.14
HLCS-205ENST00000448340 UBTFL1P0CB47 393 aaPredicted RBP22.18■■□□□ 1.14
HLCS-205ENST00000448340 DDX46Q7L014 1031 aaKnown RBP22.18■■□□□ 1.14
HLCS-205ENST00000448340 TTLL11Q8NHH1 800 aa22.18■■□□□ 1.14
HLCS-205ENST00000448340 SUCLG2Q96I99 432 aa22.18■■□□□ 1.14
HLCS-205ENST00000448340 PASKQ96RG2 1323 aa22.17■■□□□ 1.14
HLCS-205ENST00000448340 CSF1RP07333 972 aa22.17■■□□□ 1.14
HLCS-205ENST00000448340 FOXO4P98177 505 aa22.17■■□□□ 1.14
HLCS-205ENST00000448340 MEIS3Q99687 375 aa22.17■■□□□ 1.14
HLCS-205ENST00000448340 MKRN1Q9UHC7 482 aaKnown RBP22.17■■□□□ 1.14
HLCS-205ENST00000448340 DICER1Q9UPY3 1922 aaKnown RBP22.16■■□□□ 1.14
HLCS-205ENST00000448340 MVPQ14764 893 aaKnown RBP22.16■■□□□ 1.14
HLCS-205ENST00000448340 EPHA10Q5JZY3 1008 aa22.16■■□□□ 1.14
HLCS-205ENST00000448340 KAZALD1Q96I82 304 aa22.16■■□□□ 1.14
HLCS-205ENST00000448340 L3MBTL3Q96JM7 780 aaPredicted RBP22.16■■□□□ 1.14
HLCS-205ENST00000448340 RTL9Q8NET4 1388 aa22.15■■□□□ 1.14
HLCS-205ENST00000448340 C20orf194Q5TEA3 1177 aa22.15■■□□□ 1.14
HLCS-205ENST00000448340 SOGA3Q5TF21 947 aa22.15■■□□□ 1.14
HLCS-205ENST00000448340 SLX4Q8IY92 1834 aa22.15■■□□□ 1.14
HLCS-205ENST00000448340 ZBTB7BO15156 539 aaPredicted RBP22.14■■□□□ 1.13
HLCS-205ENST00000448340 GRAPQ13588 217 aa22.14■■□□□ 1.13
HLCS-205ENST00000448340 GRAPLQ8TC17 118 aaPredicted RBP22.14■■□□□ 1.13
HLCS-205ENST00000448340 CCDC85AQ96PX6 553 aaPredicted RBP22.14■■□□□ 1.13
HLCS-205ENST00000448340 DDX19BQ9UMR2 479 aa22.14■■□□□ 1.13
HLCS-205ENST00000448340 COG6Q9Y2V7 657 aa22.14■■□□□ 1.13
HLCS-205ENST00000448340 CNTNAP1P78357 1384 aa22.13■■□□□ 1.13
HLCS-205ENST00000448340 BBOX1O75936 387 aa22.13■■□□□ 1.13
HLCS-205ENST00000448340 RABL6Q3YEC7 729 aaPredicted RBP22.13■■□□□ 1.13
HLCS-205ENST00000448340 LMBR1LQ6UX01 489 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms