RNA–Protein interactions for RNA: ENST00000447456.1

CCDC18-205, Transcript of coiled-coil domain containing 18, humanhuman

TSL 1 (best)

Gene CCDC18, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-205ENST00000447456 C1orf115Q9H7X2 142 aa11.5□□□□□ -0.57
CCDC18-205ENST00000447456 ABCC12Q96J65 1359 aa11.5□□□□□ -0.57
CCDC18-205ENST00000447456 LAMB2P55268 1798 aa11.49□□□□□ -0.57
CCDC18-205ENST00000447456 MYH3P11055 1940 aa11.49□□□□□ -0.57
CCDC18-205ENST00000447456 H0YIN7 160 aa11.49□□□□□ -0.57
CCDC18-205ENST00000447456 SRGAP3O43295 1099 aa11.49□□□□□ -0.57
CCDC18-205ENST00000447456 CSF1RP07333 972 aa11.49□□□□□ -0.57
CCDC18-205ENST00000447456 ATP8B2P98198 1209 aa11.49□□□□□ -0.57
CCDC18-205ENST00000447456 IFIT5Q13325 482 aaKnown RBP11.49□□□□□ -0.57
CCDC18-205ENST00000447456 TAF7LQ5H9L4 462 aa11.49□□□□□ -0.57
CCDC18-205ENST00000447456 CEP85Q6P2H3 762 aa11.49□□□□□ -0.57
CCDC18-205ENST00000447456 DDX46Q7L014 1031 aaKnown RBP11.49□□□□□ -0.57
CCDC18-205ENST00000447456 ANKRD44Q8N8A2 993 aa11.49□□□□□ -0.57
CCDC18-205ENST00000447456 TTLL11Q8NHH1 800 aa11.49□□□□□ -0.57
CCDC18-205ENST00000447456 RWDD1Q9H446 243 aaPredicted RBP11.49□□□□□ -0.57
CCDC18-205ENST00000447456 RTL9Q8NET4 1388 aa11.49□□□□□ -0.57
CCDC18-205ENST00000447456 ANKRD18BA2A2Z9 1011 aa11.48□□□□□ -0.57
CCDC18-205ENST00000447456 KLRG2A4D1S0 409 aaPredicted RBP11.48□□□□□ -0.57
CCDC18-205ENST00000447456 PTGER2P43116 358 aa11.48□□□□□ -0.57
CCDC18-205ENST00000447456 EPHA10Q5JZY3 1008 aa11.48□□□□□ -0.57
CCDC18-205ENST00000447456 CCDC24Q8N4L8 307 aa11.48□□□□□ -0.57
CCDC18-205ENST00000447456 RBM17Q96I25 401 aaKnown RBP11.48□□□□□ -0.57
CCDC18-205ENST00000447456 KAZALD1Q96I82 304 aa11.48□□□□□ -0.57
CCDC18-205ENST00000447456 CDC5LQ99459 802 aaKnown RBP11.48□□□□□ -0.57
CCDC18-205ENST00000447456 SGIP1Q9BQI5 828 aa11.48□□□□□ -0.57
CCDC18-205ENST00000447456 PPP1R1BQ9UD71 204 aaPredicted RBP11.48□□□□□ -0.57
CCDC18-205ENST00000447456 CD2APQ9Y5K6 639 aa11.48□□□□□ -0.57
CCDC18-205ENST00000447456 C10orf71Q711Q0 1435 aa11.48□□□□□ -0.57
CCDC18-205ENST00000447456 DDX60Q8IY21 1712 aaKnown RBP11.47□□□□□ -0.57
CCDC18-205ENST00000447456 NPR1P16066 1061 aa11.47□□□□□ -0.57
CCDC18-205ENST00000447456 TGFB2P61812 414 aa11.47□□□□□ -0.57
CCDC18-205ENST00000447456 FAM161AQ3B820 660 aa11.47□□□□□ -0.57
CCDC18-205ENST00000447456 CRY2Q49AN0 593 aa11.47□□□□□ -0.57
CCDC18-205ENST00000447456 C2CD5Q86YS7 1000 aa11.47□□□□□ -0.57
CCDC18-205ENST00000447456 MASTLQ96GX5 879 aa11.47□□□□□ -0.57
CCDC18-205ENST00000447456 GREM2Q9H772 168 aa11.47□□□□□ -0.57
CCDC18-205ENST00000447456 PPP4R2Q9NY27 417 aa11.47□□□□□ -0.57
CCDC18-205ENST00000447456 PCDHB15Q9Y5E8 787 aa11.47□□□□□ -0.57
CCDC18-205ENST00000447456 SRGNP10124 158 aa11.46□□□□□ -0.57
CCDC18-205ENST00000447456 ITGA6P23229 1130 aa11.46□□□□□ -0.57
CCDC18-205ENST00000447456 ALDH1B1P30837 517 aa11.46□□□□□ -0.57
CCDC18-205ENST00000447456 HOXA10P31260 410 aaPredicted RBP11.46□□□□□ -0.57
CCDC18-205ENST00000447456 IGHMBP2P38935 993 aaKnown RBP11.46□□□□□ -0.57
CCDC18-205ENST00000447456 HDAC1Q13547 482 aaPredicted RBP11.46□□□□□ -0.57
CCDC18-205ENST00000447456 HSP90AB4PQ58FF6 505 aa11.46□□□□□ -0.57
CCDC18-205ENST00000447456 STYK1Q6J9G0 422 aa11.46□□□□□ -0.57
CCDC18-205ENST00000447456 TMC4Q7Z404 712 aa11.46□□□□□ -0.57
CCDC18-205ENST00000447456 ANKRD18AQ8IVF6 992 aa11.46□□□□□ -0.57
CCDC18-205ENST00000447456 SSH3Q8TE77 659 aa11.46□□□□□ -0.57
CCDC18-205ENST00000447456 CCDC136Q96JN2 1154 aa11.46□□□□□ -0.57
CCDC18-205ENST00000447456 CCDC85AQ96PX6 553 aaPredicted RBP11.46□□□□□ -0.57
CCDC18-205ENST00000447456 CRAMP1Q96RY5 1269 aa11.46□□□□□ -0.57
CCDC18-205ENST00000447456 FBXO3Q9UK99 471 aa11.46□□□□□ -0.57
CCDC18-205ENST00000447456 PNMA6EA0A0J9YXQ4 647 aa11.45□□□□□ -0.58
CCDC18-205ENST00000447456 BBOX1O75936 387 aa11.45□□□□□ -0.58
CCDC18-205ENST00000447456 GRAPQ13588 217 aa11.45□□□□□ -0.58
CCDC18-205ENST00000447456 POLA2Q14181 598 aa11.45□□□□□ -0.58
CCDC18-205ENST00000447456 C3orf67Q6ZVT6 689 aa11.45□□□□□ -0.58
CCDC18-205ENST00000447456 KLHL34Q8N239 644 aa11.45□□□□□ -0.58
CCDC18-205ENST00000447456 GRAPLQ8TC17 118 aaPredicted RBP11.45□□□□□ -0.58
CCDC18-205ENST00000447456 CNKSR1Q969H4 720 aa11.45□□□□□ -0.58
CCDC18-205ENST00000447456 ZNF622Q969S3 477 aaKnown RBP eCLIP11.45□□□□□ -0.58
CCDC18-205ENST00000447456 MPHOSPH8Q99549 860 aa11.45□□□□□ -0.58
CCDC18-205ENST00000447456 TMX4Q9H1E5 349 aaPredicted RBP11.45□□□□□ -0.58
CCDC18-205ENST00000447456 RPS8P62241 208 aaKnown RBP11.44□□□□□ -0.58
CCDC18-205ENST00000447456 G3BP1Q13283 466 aaKnown RBP eCLIP11.44□□□□□ -0.58
CCDC18-205ENST00000447456 OS9Q13438 667 aaPredicted RBP11.44□□□□□ -0.58
CCDC18-205ENST00000447456 ERC1Q8IUD2 1116 aa11.44□□□□□ -0.58
CCDC18-205ENST00000447456 SIRT2Q8IXJ6 389 aa11.44□□□□□ -0.58
CCDC18-205ENST00000447456 COPRSQ9NQ92 184 aa11.44□□□□□ -0.58
CCDC18-205ENST00000447456 ZBTB47Q9UFB7 747 aaPredicted RBP11.44□□□□□ -0.58
CCDC18-205ENST00000447456 TNRC6CQ9HCJ0 1690 aaKnown RBP11.43□□□□□ -0.58
CCDC18-205ENST00000447456 ANKRD31Q8N7Z5 1873 aa11.43□□□□□ -0.58
CCDC18-205ENST00000447456 RAB11FIP3O75154 756 aa11.43□□□□□ -0.58
CCDC18-205ENST00000447456 SURF6O75683 361 aaKnown RBP11.43□□□□□ -0.58
CCDC18-205ENST00000447456 CIAO1O76071 339 aa11.43□□□□□ -0.58
CCDC18-205ENST00000447456 LDHAL6AQ6ZMR3 332 aa11.43□□□□□ -0.58
CCDC18-205ENST00000447456 GCC1Q96CN9 775 aa11.43□□□□□ -0.58
CCDC18-205ENST00000447456 CNNM1Q9NRU3 951 aa11.43□□□□□ -0.58
CCDC18-205ENST00000447456 NOP58Q9Y2X3 529 aaKnown RBP11.43□□□□□ -0.58
CCDC18-205ENST00000447456 KIF13BQ9NQT8 1826 aa11.43□□□□□ -0.58
CCDC18-205ENST00000447456 EYA2O00167 538 aa11.42□□□□□ -0.58
CCDC18-205ENST00000447456 IL15P40933 162 aaPredicted RBP11.42□□□□□ -0.58
CCDC18-205ENST00000447456 RFX5P48382 616 aaPredicted RBP11.42□□□□□ -0.58
CCDC18-205ENST00000447456 PTPN12Q05209 780 aaKnown RBP11.42□□□□□ -0.58
CCDC18-205ENST00000447456 C1QBPQ07021 282 aaKnown RBP11.42□□□□□ -0.58
CCDC18-205ENST00000447456 TTLL6Q8N841 843 aa11.42□□□□□ -0.58
CCDC18-205ENST00000447456 DCTPP1Q9H773 170 aa11.42□□□□□ -0.58
CCDC18-205ENST00000447456 SEC31BQ9NQW1 1179 aa11.42□□□□□ -0.58
CCDC18-205ENST00000447456 BSDC1Q9NW68 430 aaPredicted RBP11.42□□□□□ -0.58
CCDC18-205ENST00000447456 PIM2Q9P1W9 311 aa11.42□□□□□ -0.58
CCDC18-205ENST00000447456 SRCAPQ6ZRS2 3230 aa11.42□□□□□ -0.58
CCDC18-205ENST00000447456 MROH5Q6ZUA9 1318 aa11.41□□□□□ -0.58
CCDC18-205ENST00000447456 A0A0G2JLW4 131 aa11.41□□□□□ -0.58
CCDC18-205ENST00000447456 DPEP1P16444 411 aa11.41□□□□□ -0.58
CCDC18-205ENST00000447456 CHRNA5P30532 468 aa11.41□□□□□ -0.58
CCDC18-205ENST00000447456 CENPQQ7L2Z9 268 aaPredicted RBP11.41□□□□□ -0.58
CCDC18-205ENST00000447456 ANKRD2Q9GZV1 360 aa11.41□□□□□ -0.58
CCDC18-205ENST00000447456 SIL1Q9H173 461 aa11.41□□□□□ -0.58
CCDC18-205ENST00000447456 GTF3C3Q9Y5Q9 886 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms