RNA–Protein interactions for RNA: ENST00000447079.4

CDK12-202, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK12, Length 8,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-202ENST00000447079 CCDC148Q8NFR7 591 aa8.12□□□□□ -1.11
CDK12-202ENST00000447079 SIRT1Q96EB6 747 aa8.12□□□□□ -1.11
CDK12-202ENST00000447079 UTP14AQ9BVJ6 771 aaKnown RBP8.12□□□□□ -1.11
CDK12-202ENST00000447079 LMTK3Q96Q04 1460 aa8.12□□□□□ -1.11
CDK12-202ENST00000447079 EIF5P55010 431 aaKnown RBP8.12□□□□□ -1.11
CDK12-202ENST00000447079 MAPK8IP2Q13387 824 aaPredicted RBP8.12□□□□□ -1.11
CDK12-202ENST00000447079 TMEM67Q5HYA8 995 aa8.12□□□□□ -1.11
CDK12-202ENST00000447079 ANKRD44Q8N8A2 993 aa8.12□□□□□ -1.11
CDK12-202ENST00000447079 SPC24Q8NBT2 197 aa8.12□□□□□ -1.11
CDK12-202ENST00000447079 TIGD1Q96MW7 591 aa8.12□□□□□ -1.11
CDK12-202ENST00000447079 ZBTB3Q9H5J0 574 aa8.12□□□□□ -1.11
CDK12-202ENST00000447079 UBAP1LF5GYI3 381 aa8.12□□□□□ -1.11
CDK12-202ENST00000447079 KDM4AO75164 1064 aa8.12□□□□□ -1.11
CDK12-202ENST00000447079 STK11IPQ8N1F8 1099 aa8.12□□□□□ -1.11
CDK12-202ENST00000447079 GOLIM4O00461 696 aa8.11□□□□□ -1.11
CDK12-202ENST00000447079 SSBP05455 408 aaKnown RBP eCLIP8.11□□□□□ -1.11
CDK12-202ENST00000447079 CCDC83Q8IWF9 413 aa8.11□□□□□ -1.11
CDK12-202ENST00000447079 ATP7BP35670 1465 aa8.11□□□□□ -1.11
CDK12-202ENST00000447079 MLH3Q9UHC1 1453 aa8.11□□□□□ -1.11
CDK12-202ENST00000447079 RTL9Q8NET4 1388 aa8.11□□□□□ -1.11
CDK12-202ENST00000447079 TMCO3Q6UWJ1 677 aa8.11□□□□□ -1.11
CDK12-202ENST00000447079 LINS1Q8NG48 757 aa8.11□□□□□ -1.11
CDK12-202ENST00000447079 SBNO2Q9Y2G9 1366 aa8.11□□□□□ -1.11
CDK12-202ENST00000447079 NLRP1Q9C000 1473 aa8.11□□□□□ -1.11
CDK12-202ENST00000447079 B4DLN1 442 aa8.11□□□□□ -1.11
CDK12-202ENST00000447079 MRPL12P52815 198 aaKnown RBP8.11□□□□□ -1.11
CDK12-202ENST00000447079 ESR2Q92731 530 aa8.11□□□□□ -1.11
CDK12-202ENST00000447079 NEK1Q96PY6 1258 aa8.11□□□□□ -1.11
CDK12-202ENST00000447079 CCDC8Q9H0W5 538 aaPredicted RBP8.11□□□□□ -1.11
CDK12-202ENST00000447079 CALM1P0DP23 149 aa8.11□□□□□ -1.11
CDK12-202ENST00000447079 CALM2P0DP24 149 aa8.11□□□□□ -1.11
CDK12-202ENST00000447079 CALM3P0DP25 149 aa8.11□□□□□ -1.11
CDK12-202ENST00000447079 TBC1D9Q6ZT07 1266 aa8.11□□□□□ -1.11
CDK12-202ENST00000447079 BCL11BQ9C0K0 894 aaPredicted RBP8.11□□□□□ -1.11
CDK12-202ENST00000447079 POLKQ9UBT6 870 aa8.11□□□□□ -1.11
CDK12-202ENST00000447079 QRICH2Q9H0J4 1663 aa8.11□□□□□ -1.11
CDK12-202ENST00000447079 NLRP5P59047 1200 aa8.11□□□□□ -1.11
CDK12-202ENST00000447079 SMARCA5O60264 1052 aaPredicted RBP8.11□□□□□ -1.11
CDK12-202ENST00000447079 GPTP24298 496 aa8.11□□□□□ -1.11
CDK12-202ENST00000447079 METAP2P50579 478 aaKnown RBP eCLIP8.11□□□□□ -1.11
CDK12-202ENST00000447079 KIAA1328Q86T90 577 aa8.11□□□□□ -1.11
CDK12-202ENST00000447079 DYDC1Q8WWB3 177 aa8.11□□□□□ -1.11
CDK12-202ENST00000447079 UNC13BO14795 1591 aa8.11□□□□□ -1.11
CDK12-202ENST00000447079 IARSP41252 1262 aaKnown RBP8.1□□□□□ -1.11
CDK12-202ENST00000447079 ATP2B3Q16720 1220 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 MRPL50Q8N5N7 158 aaKnown RBP8.1□□□□□ -1.11
CDK12-202ENST00000447079 RMND1Q9NWS8 449 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 RAD50Q92878 1312 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 KCNA6P17658 529 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 TPTE2Q6XPS3 522 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 DDX11Q96FC9 970 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 RTCBQ9Y3I0 505 aaKnown RBP8.1□□□□□ -1.11
CDK12-202ENST00000447079 TSPY2A6NKD2 308 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 ATP8B2P98198 1209 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 MCMDC2Q4G0Z9 681 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 ERMNQ8TAM6 284 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 RHPN1Q8TCX5 695 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 PRIMPOLQ96LW4 560 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 NBPF7P0C2Y1 421 aaPredicted RBP8.1□□□□□ -1.11
CDK12-202ENST00000447079 GSDMDP57764 484 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 UBXN4Q92575 508 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 TESK2Q96S53 571 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 CDC42BPGQ6DT37 1551 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 ZC3H13Q5T200 1668 aaKnown RBP8.1□□□□□ -1.11
CDK12-202ENST00000447079 SPA17Q15506 151 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 STX1AQ16623 288 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 PLCD4Q9BRC7 762 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 GBP3Q9H0R5 595 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 GOLGA6L9A6NEM1 432 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 SEPT7Q16181 437 aaKnown RBP8.1□□□□□ -1.11
CDK12-202ENST00000447079 OGFOD1Q8N543 542 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 XAGE3Q8WTP9 111 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 TAF4BQ92750 862 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 FEZ1Q99689 392 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 KIF24Q5T7B8 1368 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 GBP2P32456 591 aaPredicted RBP8.1□□□□□ -1.11
CDK12-202ENST00000447079 TTLL5Q6EMB2 1281 aa8.1□□□□□ -1.11
CDK12-202ENST00000447079 UGGT1Q9NYU2 1555 aa8.09□□□□□ -1.11
CDK12-202ENST00000447079 MAP3K4Q9Y6R4 1608 aa8.09□□□□□ -1.11
CDK12-202ENST00000447079 GCP02774 474 aa8.09□□□□□ -1.11
CDK12-202ENST00000447079 SFPQP23246 707 aaKnown RBP eCLIP8.09□□□□□ -1.11
CDK12-202ENST00000447079 CFAP100Q494V2 611 aa8.09□□□□□ -1.11
CDK12-202ENST00000447079 USP37Q86T82 979 aa8.09□□□□□ -1.11
CDK12-202ENST00000447079 AOX1Q06278 1338 aa8.09□□□□□ -1.11
CDK12-202ENST00000447079 TMEM2Q9UHN6 1383 aa8.09□□□□□ -1.11
CDK12-202ENST00000447079 PARP10Q53GL7 1025 aa8.09□□□□□ -1.11
CDK12-202ENST00000447079 PAF1Q8N7H5 531 aa8.09□□□□□ -1.11
CDK12-202ENST00000447079 EYA3Q99504 573 aa8.09□□□□□ -1.11
CDK12-202ENST00000447079 UBE2HP62256 183 aa8.09□□□□□ -1.11
CDK12-202ENST00000447079 IRX3P78415 501 aaPredicted RBP8.09□□□□□ -1.11
CDK12-202ENST00000447079 WTAPQ15007 396 aa8.09□□□□□ -1.11
CDK12-202ENST00000447079 STX6O43752 255 aa8.09□□□□□ -1.11
CDK12-202ENST00000447079 MAGI3Q5TCQ9 1506 aa8.09□□□□□ -1.11
CDK12-202ENST00000447079 CCDC172P0C7W6 258 aa8.09□□□□□ -1.11
CDK12-202ENST00000447079 HOXC9P31274 260 aa8.09□□□□□ -1.11
CDK12-202ENST00000447079 CNNM3Q8NE01 707 aa8.09□□□□□ -1.11
CDK12-202ENST00000447079 MAP9Q49MG5 647 aa8.08□□□□□ -1.12
CDK12-202ENST00000447079 ARHGAP29Q52LW3 1261 aa8.08□□□□□ -1.12
CDK12-202ENST00000447079 CALML3P27482 149 aa8.08□□□□□ -1.12
CDK12-202ENST00000447079 KCNG4Q8TDN1 519 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms