RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 ARHGEF10O15013 1369 aa20.62■□□□□ 0.89
ATG9A-215ENST00000446716 EIF2AK4Q9P2K8 1649 aaKnown RBP20.62■□□□□ 0.89
ATG9A-215ENST00000446716 FKBP15Q5T1M5 1219 aa20.62■□□□□ 0.89
ATG9A-215ENST00000446716 USP21Q9UK80 565 aa20.62■□□□□ 0.89
ATG9A-215ENST00000446716 ATP7AQ04656 1500 aa20.62■□□□□ 0.89
ATG9A-215ENST00000446716 IDEP14735 1019 aa20.62■□□□□ 0.89
ATG9A-215ENST00000446716 PLCG2P16885 1265 aa20.62■□□□□ 0.89
ATG9A-215ENST00000446716 PDE1AP54750 535 aa20.62■□□□□ 0.89
ATG9A-215ENST00000446716 HDAC1Q13547 482 aaPredicted RBP20.62■□□□□ 0.89
ATG9A-215ENST00000446716 IFIT1BQ5T764 474 aaKnown RBP20.62■□□□□ 0.89
ATG9A-215ENST00000446716 ZNF790Q6PG37 636 aa20.62■□□□□ 0.89
ATG9A-215ENST00000446716 TMTC2Q8N394 836 aa20.62■□□□□ 0.89
ATG9A-215ENST00000446716 TSPYL6Q8N831 410 aa20.62■□□□□ 0.89
ATG9A-215ENST00000446716 DISP1Q96F81 1524 aa20.62■□□□□ 0.89
ATG9A-215ENST00000446716 KLF18A0A0U1RQI7 1052 aa20.61■□□□□ 0.89
ATG9A-215ENST00000446716 PPFIA3O75145 1194 aa20.61■□□□□ 0.89
ATG9A-215ENST00000446716 UBA7P41226 1012 aa20.61■□□□□ 0.89
ATG9A-215ENST00000446716 TMEM87AQ8NBN3 555 aa20.61■□□□□ 0.89
ATG9A-215ENST00000446716 CNNM3Q8NE01 707 aa20.61■□□□□ 0.89
ATG9A-215ENST00000446716 BRF1Q92994 677 aa20.61■□□□□ 0.89
ATG9A-215ENST00000446716 MCMDC2Q4G0Z9 681 aa20.61■□□□□ 0.89
ATG9A-215ENST00000446716 RBM17Q96I25 401 aaKnown RBP20.61■□□□□ 0.89
ATG9A-215ENST00000446716 EPB41L2O43491 1005 aaKnown RBP20.61■□□□□ 0.89
ATG9A-215ENST00000446716 DDX17Q92841 729 aaKnown RBP20.61■□□□□ 0.89
ATG9A-215ENST00000446716 MAGEB6P1A0A0J9YX57 407 aa20.61■□□□□ 0.89
ATG9A-215ENST00000446716 VAMP4O75379 141 aa20.61■□□□□ 0.89
ATG9A-215ENST00000446716 C16orf71Q8IYS4 520 aaPredicted RBP20.61■□□□□ 0.89
ATG9A-215ENST00000446716 ANO10Q9NW15 660 aa20.61■□□□□ 0.89
ATG9A-215ENST00000446716 SBNO1A3KN83 1393 aa20.6■□□□□ 0.89
ATG9A-215ENST00000446716 FGFR1OPO95684 399 aaKnown RBP20.6■□□□□ 0.89
ATG9A-215ENST00000446716 PAG1Q9NWQ8 432 aa20.6■□□□□ 0.89
ATG9A-215ENST00000446716 ZBTB43O43298 467 aa20.6■□□□□ 0.89
ATG9A-215ENST00000446716 PARP10Q53GL7 1025 aa20.6■□□□□ 0.89
ATG9A-215ENST00000446716 IGHDP01880 384 aa20.6■□□□□ 0.89
ATG9A-215ENST00000446716 NBPF7P0C2Y1 421 aaPredicted RBP20.6■□□□□ 0.89
ATG9A-215ENST00000446716 GJB2P29033 226 aa20.6■□□□□ 0.89
ATG9A-215ENST00000446716 PRIM1P49642 420 aaKnown RBP20.6■□□□□ 0.89
ATG9A-215ENST00000446716 SDSP20132 328 aa20.59■□□□□ 0.89
ATG9A-215ENST00000446716 GNAQP50148 359 aa20.59■□□□□ 0.89
ATG9A-215ENST00000446716 ZNF771Q7L3S4 317 aaPredicted RBP20.59■□□□□ 0.89
ATG9A-215ENST00000446716 PARD3Q8TEW0 1356 aa20.59■□□□□ 0.89
ATG9A-215ENST00000446716 LMOD1P29536 600 aaPredicted RBP20.59■□□□□ 0.89
ATG9A-215ENST00000446716 NUCB1Q02818 461 aa20.59■□□□□ 0.89
ATG9A-215ENST00000446716 TMEM2Q9UHN6 1383 aa20.59■□□□□ 0.89
ATG9A-215ENST00000446716 NEFHP12036 1026 aa20.59■□□□□ 0.89
ATG9A-215ENST00000446716 AMPD3Q01432 767 aa20.59■□□□□ 0.89
ATG9A-215ENST00000446716 KIAA1328Q86T90 577 aa20.59■□□□□ 0.89
ATG9A-215ENST00000446716 LDHBP07195 334 aaKnown RBP20.59■□□□□ 0.89
ATG9A-215ENST00000446716 SH3TC1Q8TE82 1336 aa20.58■□□□□ 0.89
ATG9A-215ENST00000446716 CACNA2D4Q7Z3S7 1137 aa20.58■□□□□ 0.89
ATG9A-215ENST00000446716 FSIP1Q8NA03 581 aa20.58■□□□□ 0.89
ATG9A-215ENST00000446716 FAM89AQ96GI7 184 aa20.58■□□□□ 0.89
ATG9A-215ENST00000446716 CEP170Q5SW79 1584 aa20.58■□□□□ 0.89
ATG9A-215ENST00000446716 SYCE3A1L190 88 aa20.58■□□□□ 0.88
ATG9A-215ENST00000446716 MCM9Q9NXL9 1143 aa20.58■□□□□ 0.88
ATG9A-215ENST00000446716 CCDC150Q8NCX0 1101 aa20.58■□□□□ 0.88
ATG9A-215ENST00000446716 EDC4Q6P2E9 1401 aaKnown RBP20.57■□□□□ 0.88
ATG9A-215ENST00000446716 TFIP11Q9UBB9 837 aaKnown RBP20.57■□□□□ 0.88
ATG9A-215ENST00000446716 TAF4BQ92750 862 aa20.57■□□□□ 0.88
ATG9A-215ENST00000446716 SOS1Q07889 1333 aaPredicted RBP20.57■□□□□ 0.88
ATG9A-215ENST00000446716 CETN2P41208 172 aa20.57■□□□□ 0.88
ATG9A-215ENST00000446716 ARHGAP29Q52LW3 1261 aa20.57■□□□□ 0.88
ATG9A-215ENST00000446716 RBM8AQ9Y5S9 174 aaKnown RBP20.57■□□□□ 0.88
ATG9A-215ENST00000446716 GNAT2P19087 354 aa20.56■□□□□ 0.88
ATG9A-215ENST00000446716 RTN1Q16799 776 aa20.56■□□□□ 0.88
ATG9A-215ENST00000446716 GRPEL1Q9HAV7 217 aa20.56■□□□□ 0.88
ATG9A-215ENST00000446716 JAG2Q9Y219 1238 aa20.56■□□□□ 0.88
ATG9A-215ENST00000446716 STXBP4Q6ZWJ1 553 aa20.56■□□□□ 0.88
ATG9A-215ENST00000446716 MIGA1Q8NAN2 632 aa20.56■□□□□ 0.88
ATG9A-215ENST00000446716 CCDC148Q8NFR7 591 aa20.56■□□□□ 0.88
ATG9A-215ENST00000446716 LRRC2Q9BYS8 371 aa20.56■□□□□ 0.88
ATG9A-215ENST00000446716 VPS36Q86VN1 386 aa20.56■□□□□ 0.88
ATG9A-215ENST00000446716 PANK2Q9BZ23 570 aa20.56■□□□□ 0.88
ATG9A-215ENST00000446716 STX6O43752 255 aa20.55■□□□□ 0.88
ATG9A-215ENST00000446716 TFCP2Q12800 502 aa20.55■□□□□ 0.88
ATG9A-215ENST00000446716 PLBD2Q8NHP8 589 aa20.55■□□□□ 0.88
ATG9A-215ENST00000446716 NEO1Q92859 1461 aa20.55■□□□□ 0.88
ATG9A-215ENST00000446716 CETN1Q12798 172 aa20.55■□□□□ 0.88
ATG9A-215ENST00000446716 PCDHB15Q9Y5E8 787 aa20.55■□□□□ 0.88
ATG9A-215ENST00000446716 CTAGE5O15320 804 aa20.54■□□□□ 0.88
ATG9A-215ENST00000446716 MAGEB6Q8N7X4 407 aa20.54■□□□□ 0.88
ATG9A-215ENST00000446716 HCLS1P14317 486 aaPredicted RBP20.54■□□□□ 0.88
ATG9A-215ENST00000446716 CCDC183Q5T5S1 534 aa20.54■□□□□ 0.88
ATG9A-215ENST00000446716 CKAP2LQ8IYA6 745 aa20.54■□□□□ 0.88
ATG9A-215ENST00000446716 TCEANC2Q96MN5 208 aa20.54■□□□□ 0.88
ATG9A-215ENST00000446716 GJA3Q9Y6H8 435 aa20.54■□□□□ 0.88
ATG9A-215ENST00000446716 UFL1O94874 794 aa20.54■□□□□ 0.88
ATG9A-215ENST00000446716 HEATR3Q7Z4Q2 680 aa20.54■□□□□ 0.88
ATG9A-215ENST00000446716 ERMNQ8TAM6 284 aa20.54■□□□□ 0.88
ATG9A-215ENST00000446716 SPA17Q15506 151 aa20.53■□□□□ 0.88
ATG9A-215ENST00000446716 PYM1Q9BRP8 204 aaKnown RBP20.53■□□□□ 0.88
ATG9A-215ENST00000446716 BICC1Q9H694 974 aaKnown RBP20.53■□□□□ 0.88
ATG9A-215ENST00000446716 RNF113AO15541 343 aaKnown RBP20.53■□□□□ 0.88
ATG9A-215ENST00000446716 LTKP29376 864 aa20.53■□□□□ 0.88
ATG9A-215ENST00000446716 TNNI2P48788 182 aa20.53■□□□□ 0.88
ATG9A-215ENST00000446716 TCERG1LQ5VWI1 586 aa20.53■□□□□ 0.88
ATG9A-215ENST00000446716 CCDC87Q9NVE4 849 aa20.53■□□□□ 0.88
ATG9A-215ENST00000446716 SPDYE4A6NLX3 237 aa20.53■□□□□ 0.88
ATG9A-215ENST00000446716 APBA3O96018 575 aa20.53■□□□□ 0.88
ATG9A-215ENST00000446716 TTC41PQ6P2S7 1318 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms