RNA–Protein interactions for RNA: ENST00000446623.2

HMGN1P36-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 36, humanhuman

BASIC

Gene HMGN1P36, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P36-201ENST00000446623 EIF4A2Q14240 407 aaKnown RBP8.03□□□□□ -1.12
HMGN1P36-201ENST00000446623 RC3H1Q5TC82 1133 aaKnown RBP8.03□□□□□ -1.12
HMGN1P36-201ENST00000446623 C16orf71Q8IYS4 520 aaPredicted RBP8.03□□□□□ -1.12
HMGN1P36-201ENST00000446623 POLKQ9UBT6 870 aa8.03□□□□□ -1.12
HMGN1P36-201ENST00000446623 KCPQ6ZWJ8 1503 aa8.03□□□□□ -1.12
HMGN1P36-201ENST00000446623 TNRC6CQ9HCJ0 1690 aaKnown RBP8.02□□□□□ -1.13
HMGN1P36-201ENST00000446623 FSTL1Q12841 308 aa8.02□□□□□ -1.13
HMGN1P36-201ENST00000446623 TTLL12Q14166 644 aaPredicted RBP8.02□□□□□ -1.13
HMGN1P36-201ENST00000446623 DALRD3Q5D0E6 543 aaKnown RBP8.02□□□□□ -1.13
HMGN1P36-201ENST00000446623 COL13A1Q5TAT6 717 aaPredicted RBP8.02□□□□□ -1.13
HMGN1P36-201ENST00000446623 JMYQ8N9B5 988 aa8.02□□□□□ -1.13
HMGN1P36-201ENST00000446623 KLRG1Q96E93 195 aa8.02□□□□□ -1.13
HMGN1P36-201ENST00000446623 DCAF5Q96JK2 942 aa8.02□□□□□ -1.13
HMGN1P36-201ENST00000446623 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.02□□□□□ -1.13
HMGN1P36-201ENST00000446623 PIM2Q9P1W9 311 aa8.02□□□□□ -1.13
HMGN1P36-201ENST00000446623 SBF1O95248 1867 aa8.02□□□□□ -1.13
HMGN1P36-201ENST00000446623 KDM6AO15550 1401 aaPredicted RBP8.02□□□□□ -1.13
HMGN1P36-201ENST00000446623 KDM2BQ8NHM5 1336 aa8.02□□□□□ -1.13
HMGN1P36-201ENST00000446623 TJP1Q07157 1748 aa8.01□□□□□ -1.13
HMGN1P36-201ENST00000446623 HSP90AB1P08238 724 aaKnown RBP8.01□□□□□ -1.13
HMGN1P36-201ENST00000446623 TNNT2P45379 298 aaPredicted RBP8.01□□□□□ -1.13
HMGN1P36-201ENST00000446623 DDR1Q08345 913 aa8.01□□□□□ -1.13
HMGN1P36-201ENST00000446623 MORN1Q5T089 497 aa8.01□□□□□ -1.13
HMGN1P36-201ENST00000446623 FAM217BQ9NTX9 383 aaPredicted RBP8.01□□□□□ -1.13
HMGN1P36-201ENST00000446623 RNF181Q9P0P0 153 aa8.01□□□□□ -1.13
HMGN1P36-201ENST00000446623 SRP68Q9UHB9 627 aaKnown RBP8.01□□□□□ -1.13
HMGN1P36-201ENST00000446623 ADAMTS7Q9UKP4 1686 aa8□□□□□ -1.13
HMGN1P36-201ENST00000446623 PPEF1O14829 653 aaPredicted RBP8□□□□□ -1.13
HMGN1P36-201ENST00000446623 PTCD1O75127 700 aaKnown RBP8□□□□□ -1.13
HMGN1P36-201ENST00000446623 S1PR4O95977 384 aa8□□□□□ -1.13
HMGN1P36-201ENST00000446623 CRKLP46109 303 aaKnown RBP8□□□□□ -1.13
HMGN1P36-201ENST00000446623 CABP4P57796 275 aa8□□□□□ -1.13
HMGN1P36-201ENST00000446623 ZNF530Q6P9A1 599 aaPredicted RBP8□□□□□ -1.13
HMGN1P36-201ENST00000446623 TMUB1Q9BVT8 246 aa8□□□□□ -1.13
HMGN1P36-201ENST00000446623 RRAGCQ9HB90 399 aa8□□□□□ -1.13
HMGN1P36-201ENST00000446623 SLC24A3Q9HC58 644 aa8□□□□□ -1.13
HMGN1P36-201ENST00000446623 SLC27A5Q9Y2P5 690 aa8□□□□□ -1.13
HMGN1P36-201ENST00000446623 USP42Q9H9J4 1324 aaKnown RBP8□□□□□ -1.13
HMGN1P36-201ENST00000446623 TRIM66O15016 1216 aa7.99□□□□□ -1.13
HMGN1P36-201ENST00000446623 RGS20O76081 388 aa7.99□□□□□ -1.13
HMGN1P36-201ENST00000446623 CHRNA5P30532 468 aa7.99□□□□□ -1.13
HMGN1P36-201ENST00000446623 PLEKHO1Q53GL0 409 aaPredicted RBP7.99□□□□□ -1.13
HMGN1P36-201ENST00000446623 HLA-CQ95604 372 aa7.99□□□□□ -1.13
HMGN1P36-201ENST00000446623 POLRMTO00411 1230 aaKnown RBP7.98□□□□□ -1.13
HMGN1P36-201ENST00000446623 KDM4AO75164 1064 aa7.98□□□□□ -1.13
HMGN1P36-201ENST00000446623 ADH1BP00325 375 aa7.98□□□□□ -1.13
HMGN1P36-201ENST00000446623 SSTR3P32745 418 aaPredicted RBP7.98□□□□□ -1.13
HMGN1P36-201ENST00000446623 GGCXP38435 758 aa7.98□□□□□ -1.13
HMGN1P36-201ENST00000446623 MTHFSP49914 203 aa7.98□□□□□ -1.13
HMGN1P36-201ENST00000446623 AMOTQ4VCS5 1084 aa7.98□□□□□ -1.13
HMGN1P36-201ENST00000446623 NFATC2IPQ8NCF5 419 aa7.98□□□□□ -1.13
HMGN1P36-201ENST00000446623 SMC1BQ8NDV3 1235 aa7.98□□□□□ -1.13
HMGN1P36-201ENST00000446623 SPSB2Q99619 263 aa7.98□□□□□ -1.13
HMGN1P36-201ENST00000446623 PRKD2Q9BZL6 878 aa7.98□□□□□ -1.13
HMGN1P36-201ENST00000446623 AFDNP55196 1824 aaKnown RBP7.98□□□□□ -1.13
HMGN1P36-201ENST00000446623 SCN11AQ9UI33 1791 aa7.97□□□□□ -1.13
HMGN1P36-201ENST00000446623 DLEC1Q9Y238 1755 aa7.97□□□□□ -1.13
HMGN1P36-201ENST00000446623 RNF223E7ERA6 249 aa7.97□□□□□ -1.13
HMGN1P36-201ENST00000446623 TM4SF1P30408 202 aa7.97□□□□□ -1.13
HMGN1P36-201ENST00000446623 RASSF7Q02833 373 aa7.97□□□□□ -1.13
HMGN1P36-201ENST00000446623 AMHR2Q16671 573 aa7.97□□□□□ -1.13
HMGN1P36-201ENST00000446623 C1orf141Q5JVX7 400 aa7.97□□□□□ -1.13
HMGN1P36-201ENST00000446623 INTS5Q6P9B9 1019 aaKnown RBP7.97□□□□□ -1.13
HMGN1P36-201ENST00000446623 GIGYF2Q6Y7W6 1299 aaKnown RBP7.97□□□□□ -1.13
HMGN1P36-201ENST00000446623 AEBP1Q8IUX7 1158 aa7.97□□□□□ -1.13
HMGN1P36-201ENST00000446623 TNS4Q8IZW8 715 aa7.97□□□□□ -1.13
HMGN1P36-201ENST00000446623 TIAM2Q8IVF5 1701 aa7.97□□□□□ -1.13
HMGN1P36-201ENST00000446623 ZC3H4Q9UPT8 1303 aaKnown RBP7.97□□□□□ -1.13
HMGN1P36-201ENST00000446623 NRXN2Q9P2S2 1712 aa7.96□□□□□ -1.14
HMGN1P36-201ENST00000446623 PRELPP51888 382 aa7.96□□□□□ -1.14
HMGN1P36-201ENST00000446623 GUCA2AQ02747 115 aa7.96□□□□□ -1.14
HMGN1P36-201ENST00000446623 GRIPAP1Q4V328 841 aa7.96□□□□□ -1.14
HMGN1P36-201ENST00000446623 USPL1Q5W0Q7 1092 aa7.96□□□□□ -1.14
HMGN1P36-201ENST00000446623 RNF19BQ6ZMZ0 732 aa7.96□□□□□ -1.14
HMGN1P36-201ENST00000446623 POLR3GLQ9BT43 218 aa7.96□□□□□ -1.14
HMGN1P36-201ENST00000446623 SLC6A16Q9GZN6 736 aa7.96□□□□□ -1.14
HMGN1P36-201ENST00000446623 SOS1Q07889 1333 aaPredicted RBP7.96□□□□□ -1.14
HMGN1P36-201ENST00000446623 CCDC88AQ3V6T2 1871 aa7.96□□□□□ -1.14
HMGN1P36-201ENST00000446623 VEGFAP15692 232 aaPredicted RBP7.95□□□□□ -1.14
HMGN1P36-201ENST00000446623 LMNB1P20700 586 aa7.95□□□□□ -1.14
HMGN1P36-201ENST00000446623 SULT6B1Q6IMI4 303 aa7.95□□□□□ -1.14
HMGN1P36-201ENST00000446623 DNAJC10Q8IXB1 793 aa7.95□□□□□ -1.14
HMGN1P36-201ENST00000446623 PARP9Q8IXQ6 854 aa7.95□□□□□ -1.14
HMGN1P36-201ENST00000446623 THAP11Q96EK4 314 aa7.95□□□□□ -1.14
HMGN1P36-201ENST00000446623 GLTPD2A6NH11 291 aa7.94□□□□□ -1.14
HMGN1P36-201ENST00000446623 FMNL1O95466 1100 aaPredicted RBP7.94□□□□□ -1.14
HMGN1P36-201ENST00000446623 CYP19A1P11511 503 aaPredicted RBP7.94□□□□□ -1.14
HMGN1P36-201ENST00000446623 NFIXQ14938 502 aa7.94□□□□□ -1.14
HMGN1P36-201ENST00000446623 NUTM1Q86Y26 1132 aa7.94□□□□□ -1.14
HMGN1P36-201ENST00000446623 NARFQ9UHQ1 456 aa7.94□□□□□ -1.14
HMGN1P36-201ENST00000446623 COL15A1P39059 1388 aa7.94□□□□□ -1.14
HMGN1P36-201ENST00000446623 VIRMAQ69YN4 1812 aaKnown RBP7.94□□□□□ -1.14
HMGN1P36-201ENST00000446623 MRC1P22897 1456 aa7.94□□□□□ -1.14
HMGN1P36-201ENST00000446623 POTECB2RU33 542 aa7.93□□□□□ -1.14
HMGN1P36-201ENST00000446623 NFKBIEO00221 500 aa7.93□□□□□ -1.14
HMGN1P36-201ENST00000446623 HOXA2O43364 376 aa7.93□□□□□ -1.14
HMGN1P36-201ENST00000446623 HSPA1AP0DMV8 641 aaKnown RBP7.93□□□□□ -1.14
HMGN1P36-201ENST00000446623 HSPA1BP0DMV9 641 aaKnown RBP7.93□□□□□ -1.14
HMGN1P36-201ENST00000446623 MORC1Q86VD1 984 aa7.93□□□□□ -1.14
HMGN1P36-201ENST00000446623 C2CD5Q86YS7 1000 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms