RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 BABAM1Q9NWV8 329 aa16.83■□□□□ 0.29
ERCC3-203ENST00000445889 NWD1Q149M9 1564 aa16.83■□□□□ 0.29
ERCC3-203ENST00000445889 IGKV5-2P06315 115 aa16.83■□□□□ 0.28
ERCC3-203ENST00000445889 FGD1P98174 961 aa16.83■□□□□ 0.28
ERCC3-203ENST00000445889 MTX1Q13505 466 aa16.83■□□□□ 0.28
ERCC3-203ENST00000445889 USP16Q9Y5T5 823 aa16.83■□□□□ 0.28
ERCC3-203ENST00000445889 A0A0G2JLW4 131 aa16.83■□□□□ 0.28
ERCC3-203ENST00000445889 CHST3Q7LGC8 479 aa16.83■□□□□ 0.28
ERCC3-203ENST00000445889 PHF8Q9UPP1 1060 aa16.83■□□□□ 0.28
ERCC3-203ENST00000445889 TBX22Q9Y458 520 aa16.83■□□□□ 0.28
ERCC3-203ENST00000445889 H3BQV1 296 aa16.82■□□□□ 0.28
ERCC3-203ENST00000445889 IFFO2Q5TF58 517 aa16.82■□□□□ 0.28
ERCC3-203ENST00000445889 DDX46Q7L014 1031 aaKnown RBP16.82■□□□□ 0.28
ERCC3-203ENST00000445889 KCNB2Q92953 911 aa16.82■□□□□ 0.28
ERCC3-203ENST00000445889 AKAP4Q5JQC9 854 aa16.82■□□□□ 0.28
ERCC3-203ENST00000445889 Q6ZUG5 572 aa16.82■□□□□ 0.28
ERCC3-203ENST00000445889 ERC1Q8IUD2 1116 aa16.82■□□□□ 0.28
ERCC3-203ENST00000445889 CACTINQ8WUQ7 758 aaKnown RBP16.82■□□□□ 0.28
ERCC3-203ENST00000445889 CCT2P78371 535 aaKnown RBP16.81■□□□□ 0.28
ERCC3-203ENST00000445889 PLEKHO1Q53GL0 409 aaPredicted RBP16.81■□□□□ 0.28
ERCC3-203ENST00000445889 MYD88Q99836 296 aa16.81■□□□□ 0.28
ERCC3-203ENST00000445889 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.81■□□□□ 0.28
ERCC3-203ENST00000445889 V9GYY5 206 aaPredicted RBP16.81■□□□□ 0.28
ERCC3-203ENST00000445889 DIP2BQ9P265 1576 aa16.81■□□□□ 0.28
ERCC3-203ENST00000445889 PXDNLA1KZ92 1463 aa16.81■□□□□ 0.28
ERCC3-203ENST00000445889 NALCNQ8IZF0 1738 aa16.81■□□□□ 0.28
ERCC3-203ENST00000445889 ATP5J2-PTCD1G3V325 749 aa16.81■□□□□ 0.28
ERCC3-203ENST00000445889 PTCD1O75127 700 aaKnown RBP16.81■□□□□ 0.28
ERCC3-203ENST00000445889 TAF5LO75529 589 aa16.81■□□□□ 0.28
ERCC3-203ENST00000445889 RNF20Q5VTR2 975 aa16.81■□□□□ 0.28
ERCC3-203ENST00000445889 COL15A1P39059 1388 aa16.81■□□□□ 0.28
ERCC3-203ENST00000445889 PIK3C2AO00443 1686 aa16.81■□□□□ 0.28
ERCC3-203ENST00000445889 ZSCAN25Q6NSZ9 544 aa16.8■□□□□ 0.28
ERCC3-203ENST00000445889 CLIP2Q9UDT6 1046 aa16.8■□□□□ 0.28
ERCC3-203ENST00000445889 TNNT1P13805 278 aa16.8■□□□□ 0.28
ERCC3-203ENST00000445889 PDCP20941 246 aa16.8■□□□□ 0.28
ERCC3-203ENST00000445889 ZNF75DP51815 510 aa16.8■□□□□ 0.28
ERCC3-203ENST00000445889 DMTNQ08495 405 aa16.8■□□□□ 0.28
ERCC3-203ENST00000445889 TFCP2Q12800 502 aa16.8■□□□□ 0.28
ERCC3-203ENST00000445889 LINS1Q8NG48 757 aa16.8■□□□□ 0.28
ERCC3-203ENST00000445889 SYTL4Q96C24 671 aaPredicted RBP16.8■□□□□ 0.28
ERCC3-203ENST00000445889 SCAND2PQ9GZW5 306 aaPredicted RBP16.8■□□□□ 0.28
ERCC3-203ENST00000445889 FMN2Q9NZ56 1722 aa16.8■□□□□ 0.28
ERCC3-203ENST00000445889 ALDH1L1O75891 902 aa16.8■□□□□ 0.28
ERCC3-203ENST00000445889 C11orf57Q6ZUT1 292 aaPredicted RBP16.8■□□□□ 0.28
ERCC3-203ENST00000445889 COPS6Q7L5N1 327 aa16.8■□□□□ 0.28
ERCC3-203ENST00000445889 FILIP1Q7Z7B0 1213 aa16.8■□□□□ 0.28
ERCC3-203ENST00000445889 NCOA5Q9HCD5 579 aaKnown RBP16.8■□□□□ 0.28
ERCC3-203ENST00000445889 DBNLQ9UJU6 430 aaKnown RBP16.8■□□□□ 0.28
ERCC3-203ENST00000445889 AXIN2Q9Y2T1 843 aa16.8■□□□□ 0.28
ERCC3-203ENST00000445889 USP27XA6NNY8 438 aa16.79■□□□□ 0.28
ERCC3-203ENST00000445889 NEK1Q96PY6 1258 aa16.79■□□□□ 0.28
ERCC3-203ENST00000445889 TRMT1Q9NXH9 659 aaKnown RBP16.79■□□□□ 0.28
ERCC3-203ENST00000445889 TPM3P06753 285 aa16.79■□□□□ 0.28
ERCC3-203ENST00000445889 TPD52L1Q16890 204 aaPredicted RBP16.79■□□□□ 0.28
ERCC3-203ENST00000445889 XAGE3Q8WTP9 111 aa16.79■□□□□ 0.28
ERCC3-203ENST00000445889 CLSTN2Q9H4D0 955 aa16.79■□□□□ 0.28
ERCC3-203ENST00000445889 NPHP4O75161 1426 aaPredicted RBP16.79■□□□□ 0.28
ERCC3-203ENST00000445889 CYP21A2P08686 494 aa16.78■□□□□ 0.28
ERCC3-203ENST00000445889 DBNDD2Q9BQY9 259 aa16.78■□□□□ 0.28
ERCC3-203ENST00000445889 TOPAZ1Q8N9V7 1692 aa16.78■□□□□ 0.28
ERCC3-203ENST00000445889 NPHP3Q7Z494 1330 aa16.78■□□□□ 0.28
ERCC3-203ENST00000445889 NPHP1O15259 732 aa16.78■□□□□ 0.28
ERCC3-203ENST00000445889 SCRN1Q12765 414 aa16.78■□□□□ 0.28
ERCC3-203ENST00000445889 HOXB7P09629 217 aa16.77■□□□□ 0.28
ERCC3-203ENST00000445889 PDIA6Q15084 440 aa16.77■□□□□ 0.28
ERCC3-203ENST00000445889 UBE3BQ7Z3V4 1068 aa16.77■□□□□ 0.27
ERCC3-203ENST00000445889 DIP2AQ14689 1571 aa16.77■□□□□ 0.27
ERCC3-203ENST00000445889 APOBRQ0VD83 1088 aa16.76■□□□□ 0.27
ERCC3-203ENST00000445889 ANKRD1Q15327 319 aa16.76■□□□□ 0.27
ERCC3-203ENST00000445889 RAB11FIP4Q86YS3 637 aa16.76■□□□□ 0.27
ERCC3-203ENST00000445889 ORAI2Q96SN7 254 aa16.76■□□□□ 0.27
ERCC3-203ENST00000445889 CACNA1FO60840 1977 aa16.76■□□□□ 0.27
ERCC3-203ENST00000445889 NCBP1Q09161 790 aaKnown RBP16.76■□□□□ 0.27
ERCC3-203ENST00000445889 STOX1Q6ZVD7 989 aa16.76■□□□□ 0.27
ERCC3-203ENST00000445889 NFATC2IPQ8NCF5 419 aa16.76■□□□□ 0.27
ERCC3-203ENST00000445889 GTF3C6Q969F1 213 aa16.76■□□□□ 0.27
ERCC3-203ENST00000445889 ELP1O95163 1332 aa16.76■□□□□ 0.27
ERCC3-203ENST00000445889 PXDNQ92626 1479 aa16.76■□□□□ 0.27
ERCC3-203ENST00000445889 HIP1O00291 1037 aa16.76■□□□□ 0.27
ERCC3-203ENST00000445889 ZC3H6P61129 1189 aaKnown RBP16.76■□□□□ 0.27
ERCC3-203ENST00000445889 RESTQ13127 1097 aa16.76■□□□□ 0.27
ERCC3-203ENST00000445889 OTUD7BQ6GQQ9 843 aa16.76■□□□□ 0.27
ERCC3-203ENST00000445889 PLA2G4DQ86XP0 818 aa16.76■□□□□ 0.27
ERCC3-203ENST00000445889 ANKRD24Q8TF21 1146 aa16.76■□□□□ 0.27
ERCC3-203ENST00000445889 NEUROD6Q96NK8 337 aa16.76■□□□□ 0.27
ERCC3-203ENST00000445889 GOLPH3LQ9H4A5 285 aa16.76■□□□□ 0.27
ERCC3-203ENST00000445889 DDX19AQ9NUU7 478 aaKnown RBP16.76■□□□□ 0.27
ERCC3-203ENST00000445889 NEURL1BA8MQ27 555 aa16.75■□□□□ 0.27
ERCC3-203ENST00000445889 GCP02774 474 aa16.75■□□□□ 0.27
ERCC3-203ENST00000445889 CCAR1Q8IX12 1150 aaKnown RBP16.75■□□□□ 0.27
ERCC3-203ENST00000445889 UBR1Q8IWV7 1749 aa16.75■□□□□ 0.27
ERCC3-203ENST00000445889 GOLGA6L19H0YKK7 550 aa16.74■□□□□ 0.27
ERCC3-203ENST00000445889 DDX58O95786 925 aaKnown RBP16.74■□□□□ 0.27
ERCC3-203ENST00000445889 GCKRQ14397 625 aa16.74■□□□□ 0.27
ERCC3-203ENST00000445889 ANKRD7Q92527 254 aa16.74■□□□□ 0.27
ERCC3-203ENST00000445889 DDX21Q9NR30 783 aaKnown RBP eCLIP16.74■□□□□ 0.27
ERCC3-203ENST00000445889 USP28Q96RU2 1077 aa16.74■□□□□ 0.27
ERCC3-203ENST00000445889 GPHNQ9NQX3 736 aaPredicted RBP16.74■□□□□ 0.27
ERCC3-203ENST00000445889 LRRC37A3O60309 1634 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms