RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 ITGA6P23229 1130 aa21.69■■□□□ 1.06
SGCE-206ENST00000445866 FAM161AQ3B820 660 aa21.69■■□□□ 1.06
SGCE-206ENST00000445866 DDX46Q7L014 1031 aaKnown RBP21.69■■□□□ 1.06
SGCE-206ENST00000445866 NUP98P52948 1817 aa21.68■■□□□ 1.06
SGCE-206ENST00000445866 BCORQ6W2J9 1755 aa21.68■■□□□ 1.06
SGCE-206ENST00000445866 ANKRD18BA2A2Z9 1011 aa21.68■■□□□ 1.06
SGCE-206ENST00000445866 C2CD5Q86YS7 1000 aa21.68■■□□□ 1.06
SGCE-206ENST00000445866 KLHL34Q8N239 644 aa21.68■■□□□ 1.06
SGCE-206ENST00000445866 SSH3Q8TE77 659 aa21.68■■□□□ 1.06
SGCE-206ENST00000445866 RWDD1Q9H446 243 aaPredicted RBP21.68■■□□□ 1.06
SGCE-206ENST00000445866 SEC31BQ9NQW1 1179 aa21.68■■□□□ 1.06
SGCE-206ENST00000445866 GTF3C3Q9Y5Q9 886 aa21.68■■□□□ 1.06
SGCE-206ENST00000445866 CRY2Q49AN0 593 aa21.67■■□□□ 1.06
SGCE-206ENST00000445866 TAF7LQ5H9L4 462 aa21.67■■□□□ 1.06
SGCE-206ENST00000445866 RBM17Q96I25 401 aaKnown RBP21.67■■□□□ 1.06
SGCE-206ENST00000445866 PPP4R2Q9NY27 417 aa21.67■■□□□ 1.06
SGCE-206ENST00000445866 POLA2Q14181 598 aa21.66■■□□□ 1.06
SGCE-206ENST00000445866 KLHDC4Q8TBB5 520 aa21.66■■□□□ 1.06
SGCE-206ENST00000445866 ZNF622Q969S3 477 aaKnown RBP eCLIP21.66■■□□□ 1.06
SGCE-206ENST00000445866 PDZRN3Q9UPQ7 1066 aa21.66■■□□□ 1.06
SGCE-206ENST00000445866 QSER1Q2KHR3 1735 aa21.65■■□□□ 1.06
SGCE-206ENST00000445866 SRGNP10124 158 aa21.65■■□□□ 1.06
SGCE-206ENST00000445866 NPR1P16066 1061 aa21.65■■□□□ 1.06
SGCE-206ENST00000445866 CHRNA5P30532 468 aa21.65■■□□□ 1.06
SGCE-206ENST00000445866 ZNF594Q96JF6 807 aaPredicted RBP21.65■■□□□ 1.06
SGCE-206ENST00000445866 CCDC136Q96JN2 1154 aa21.65■■□□□ 1.06
SGCE-206ENST00000445866 CD2APQ9Y5K6 639 aa21.65■■□□□ 1.06
SGCE-206ENST00000445866 A0A0G2JLW4 131 aa21.64■■□□□ 1.05
SGCE-206ENST00000445866 IGHDP01880 384 aa21.64■■□□□ 1.05
SGCE-206ENST00000445866 HOXA10P31260 410 aaPredicted RBP21.64■■□□□ 1.05
SGCE-206ENST00000445866 RFX5P48382 616 aaPredicted RBP21.64■■□□□ 1.05
SGCE-206ENST00000445866 HDAC1Q13547 482 aaPredicted RBP21.64■■□□□ 1.05
SGCE-206ENST00000445866 MASTLQ96GX5 879 aa21.64■■□□□ 1.05
SGCE-206ENST00000445866 CDC5LQ99459 802 aaKnown RBP21.64■■□□□ 1.05
SGCE-206ENST00000445866 PA2G4Q9UQ80 394 aaKnown RBP21.64■■□□□ 1.05
SGCE-206ENST00000445866 SURF6O75683 361 aaKnown RBP21.63■■□□□ 1.05
SGCE-206ENST00000445866 TGFB2P61812 414 aa21.63■■□□□ 1.05
SGCE-206ENST00000445866 RPS8P62241 208 aaKnown RBP21.63■■□□□ 1.05
SGCE-206ENST00000445866 PTPN12Q05209 780 aaKnown RBP21.63■■□□□ 1.05
SGCE-206ENST00000445866 ANKRD18AQ8IVF6 992 aa21.63■■□□□ 1.05
SGCE-206ENST00000445866 SIL1Q9H173 461 aa21.63■■□□□ 1.05
SGCE-206ENST00000445866 RIC1Q4ADV7 1423 aa21.62■■□□□ 1.05
SGCE-206ENST00000445866 DPEP1P16444 411 aa21.62■■□□□ 1.05
SGCE-206ENST00000445866 ALDH1B1P30837 517 aa21.62■■□□□ 1.05
SGCE-206ENST00000445866 IGHMBP2P38935 993 aaKnown RBP21.62■■□□□ 1.05
SGCE-206ENST00000445866 LDHAL6AQ6ZMR3 332 aa21.62■■□□□ 1.05
SGCE-206ENST00000445866 CRAMP1Q96RY5 1269 aa21.62■■□□□ 1.05
SGCE-206ENST00000445866 MPHOSPH8Q99549 860 aa21.62■■□□□ 1.05
SGCE-206ENST00000445866 COPRSQ9NQ92 184 aa21.62■■□□□ 1.05
SGCE-206ENST00000445866 RTL9Q8NET4 1388 aa21.61■■□□□ 1.05
SGCE-206ENST00000445866 G3BP1Q13283 466 aaKnown RBP eCLIP21.61■■□□□ 1.05
SGCE-206ENST00000445866 GRAPQ13588 217 aa21.61■■□□□ 1.05
SGCE-206ENST00000445866 B4GALNT3Q6L9W6 998 aa21.61■■□□□ 1.05
SGCE-206ENST00000445866 GRAPLQ8TC17 118 aaPredicted RBP21.61■■□□□ 1.05
SGCE-206ENST00000445866 CELF1Q92879 486 aaKnown RBP21.61■■□□□ 1.05
SGCE-206ENST00000445866 CASZ1Q86V15 1759 aa21.61■■□□□ 1.05
SGCE-206ENST00000445866 BBOX1O75936 387 aa21.6■■□□□ 1.05
SGCE-206ENST00000445866 STYK1Q6J9G0 422 aa21.6■■□□□ 1.05
SGCE-206ENST00000445866 CNNM1Q9NRU3 951 aa21.6■■□□□ 1.05
SGCE-206ENST00000445866 OS9Q13438 667 aaPredicted RBP21.6■■□□□ 1.05
SGCE-206ENST00000445866 PUS3Q9BZE2 481 aaKnown RBP21.6■■□□□ 1.05
SGCE-206ENST00000445866 DCTPP1Q9H773 170 aa21.6■■□□□ 1.05
SGCE-206ENST00000445866 C10orf71Q711Q0 1435 aa21.59■■□□□ 1.05
SGCE-206ENST00000445866 CNKSR1Q969H4 720 aa21.59■■□□□ 1.05
SGCE-206ENST00000445866 EXOC6BQ9Y2D4 811 aa21.59■■□□□ 1.05
SGCE-206ENST00000445866 NOP58Q9Y2X3 529 aaKnown RBP21.59■■□□□ 1.05
SGCE-206ENST00000445866 EYA2O00167 538 aa21.58■■□□□ 1.05
SGCE-206ENST00000445866 KCNA3P22001 575 aa21.58■■□□□ 1.05
SGCE-206ENST00000445866 LRRC24Q50LG9 513 aa21.58■■□□□ 1.05
SGCE-206ENST00000445866 HSP90AB4PQ58FF6 505 aa21.58■■□□□ 1.05
SGCE-206ENST00000445866 FHDC1Q9C0D6 1143 aaPredicted RBP21.58■■□□□ 1.05
SGCE-206ENST00000445866 BSDC1Q9NW68 430 aaPredicted RBP21.58■■□□□ 1.05
SGCE-206ENST00000445866 APBB1O00213 710 aa21.57■■□□□ 1.04
SGCE-206ENST00000445866 ANKRD36CQ5JPF3 1778 aa21.57■■□□□ 1.04
SGCE-206ENST00000445866 PIM2Q9P1W9 311 aa21.56■■□□□ 1.04
SGCE-206ENST00000445866 COL24A1Q17RW2 1714 aa21.56■■□□□ 1.04
SGCE-206ENST00000445866 TTLL6Q8N841 843 aa21.56■■□□□ 1.04
SGCE-206ENST00000445866 GCC1Q96CN9 775 aa21.56■■□□□ 1.04
SGCE-206ENST00000445866 FBXO3Q9UK99 471 aa21.56■■□□□ 1.04
SGCE-206ENST00000445866 RIPOR2Q9Y4F9 1068 aa21.56■■□□□ 1.04
SGCE-206ENST00000445866 SRCAPQ6ZRS2 3230 aa21.56■■□□□ 1.04
SGCE-206ENST00000445866 RAB11FIP3O75154 756 aa21.55■■□□□ 1.04
SGCE-206ENST00000445866 IL15P40933 162 aaPredicted RBP21.55■■□□□ 1.04
SGCE-206ENST00000445866 ATG9AQ7Z3C6 839 aa21.55■■□□□ 1.04
SGCE-206ENST00000445866 CIAO1O76071 339 aa21.54■■□□□ 1.04
SGCE-206ENST00000445866 NLGN2Q8NFZ4 835 aa21.54■■□□□ 1.04
SGCE-206ENST00000445866 BCL11AQ9H165 835 aa21.54■■□□□ 1.04
SGCE-206ENST00000445866 TMX4Q9H1E5 349 aaPredicted RBP21.54■■□□□ 1.04
SGCE-206ENST00000445866 AFDNP55196 1824 aaKnown RBP21.54■■□□□ 1.04
SGCE-206ENST00000445866 PPEF1O14829 653 aaPredicted RBP21.53■■□□□ 1.04
SGCE-206ENST00000445866 PRPF40BQ6NWY9 871 aaKnown RBP21.53■■□□□ 1.04
SGCE-206ENST00000445866 SYT17Q9BSW7 474 aa21.53■■□□□ 1.04
SGCE-206ENST00000445866 CEP126Q9P2H0 1117 aa21.53■■□□□ 1.04
SGCE-206ENST00000445866 ZNF219Q9P2Y4 722 aaPredicted RBP21.53■■□□□ 1.04
SGCE-206ENST00000445866 WWC3Q9ULE0 1092 aa21.53■■□□□ 1.04
SGCE-206ENST00000445866 MINPP1Q9UNW1 487 aa21.53■■□□□ 1.04
SGCE-206ENST00000445866 METTL24Q5JXM2 366 aa21.53■■□□□ 1.04
SGCE-206ENST00000445866 ANKRD45Q5TZF3 282 aa21.53■■□□□ 1.04
SGCE-206ENST00000445866 TMC4Q7Z404 712 aa21.53■■□□□ 1.04
SGCE-206ENST00000445866 ERC1Q8IUD2 1116 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms