RNA–Protein interactions for RNA: ENST00000445692.5

APLF-203, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 3,906 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-203ENST00000445692 CCDC171Q6TFL3 1326 aa14.05□□□□□ -0.16
APLF-203ENST00000445692 RXRAP19793 462 aa14.05□□□□□ -0.16
APLF-203ENST00000445692 BMS1Q14692 1282 aaKnown RBP14.05□□□□□ -0.16
APLF-203ENST00000445692 UBE3BQ7Z3V4 1068 aa14.05□□□□□ -0.16
APLF-203ENST00000445692 ZC3H6P61129 1189 aaKnown RBP14.04□□□□□ -0.16
APLF-203ENST00000445692 KARSQ15046 597 aaKnown RBP14.04□□□□□ -0.16
APLF-203ENST00000445692 VPS53Q5VIR6 699 aa14.04□□□□□ -0.16
APLF-203ENST00000445692 LEKR1Q6ZMV7 388 aa14.04□□□□□ -0.16
APLF-203ENST00000445692 GPATCH11Q8N954 259 aa14.04□□□□□ -0.16
APLF-203ENST00000445692 CALCOCO1Q9P1Z2 691 aa14.04□□□□□ -0.16
APLF-203ENST00000445692 KCNQ3O43525 872 aa14.04□□□□□ -0.16
APLF-203ENST00000445692 TPM1P09493 284 aa14.04□□□□□ -0.16
APLF-203ENST00000445692 IRX3P78415 501 aaPredicted RBP14.04□□□□□ -0.16
APLF-203ENST00000445692 MRVI1Q9Y6F6 885 aa14.04□□□□□ -0.16
APLF-203ENST00000445692 RAPGEF4Q8WZA2 1011 aa14.04□□□□□ -0.16
APLF-203ENST00000445692 SLC27A2O14975 620 aa14.03□□□□□ -0.16
APLF-203ENST00000445692 AKAP17AQ02040 695 aaKnown RBP14.03□□□□□ -0.16
APLF-203ENST00000445692 ZNF710Q8N1W2 664 aa14.03□□□□□ -0.16
APLF-203ENST00000445692 LRRC59Q96AG4 307 aaKnown RBP14.03□□□□□ -0.16
APLF-203ENST00000445692 CLTCQ00610 1675 aaKnown RBP14.03□□□□□ -0.16
APLF-203ENST00000445692 GOLGA8FQ08AF8 430 aa14.03□□□□□ -0.16
APLF-203ENST00000445692 GOLGA8DPQ0D2H9 430 aa14.03□□□□□ -0.16
APLF-203ENST00000445692 KRT32Q14532 448 aa14.03□□□□□ -0.16
APLF-203ENST00000445692 PLEKHO1Q53GL0 409 aaPredicted RBP14.03□□□□□ -0.16
APLF-203ENST00000445692 AXDND1Q5T1B0 1012 aaPredicted RBP14.03□□□□□ -0.16
APLF-203ENST00000445692 C10orf67Q8IYJ2 551 aa14.03□□□□□ -0.16
APLF-203ENST00000445692 NOC3LQ8WTT2 800 aaKnown RBP14.03□□□□□ -0.16
APLF-203ENST00000445692 FEZ1Q99689 392 aa14.03□□□□□ -0.16
APLF-203ENST00000445692 POLR1AO95602 1720 aaPredicted RBP14.03□□□□□ -0.16
APLF-203ENST00000445692 SEC62Q99442 399 aaKnown RBP14.03□□□□□ -0.16
APLF-203ENST00000445692 UTP14AQ9BVJ6 771 aaKnown RBP14.03□□□□□ -0.16
APLF-203ENST00000445692 NUP133Q8WUM0 1156 aa14.02□□□□□ -0.16
APLF-203ENST00000445692 LGR6Q9HBX8 967 aa14.02□□□□□ -0.16
APLF-203ENST00000445692 ORC3Q9UBD5 711 aaPredicted RBP14.02□□□□□ -0.16
APLF-203ENST00000445692 GOLGA8BA8MQT2 603 aa14.02□□□□□ -0.17
APLF-203ENST00000445692 ST7Q9NRC1 585 aa14.02□□□□□ -0.17
APLF-203ENST00000445692 PIK3R4Q99570 1358 aa14.02□□□□□ -0.17
APLF-203ENST00000445692 CEP152O94986 1710 aa14.02□□□□□ -0.17
APLF-203ENST00000445692 ZNF853P0CG23 659 aa14.02□□□□□ -0.17
APLF-203ENST00000445692 UBASH3AP57075 661 aa14.02□□□□□ -0.17
APLF-203ENST00000445692 TSR1Q2NL82 804 aaKnown RBP14.02□□□□□ -0.17
APLF-203ENST00000445692 HYPKQ9NX55 129 aa14.02□□□□□ -0.17
APLF-203ENST00000445692 AGLP35573 1532 aa14.02□□□□□ -0.17
APLF-203ENST00000445692 PATL2C9JE40 543 aaKnown RBP14.01□□□□□ -0.17
APLF-203ENST00000445692 NEK11Q8NG66 645 aa14.01□□□□□ -0.17
APLF-203ENST00000445692 AK7Q96M32 723 aa14.01□□□□□ -0.17
APLF-203ENST00000445692 CARD6Q9BX69 1037 aa14.01□□□□□ -0.17
APLF-203ENST00000445692 YTHDC2Q9H6S0 1430 aaKnown RBP14.01□□□□□ -0.17
APLF-203ENST00000445692 PTPDC1A2A3K4 754 aa14.01□□□□□ -0.17
APLF-203ENST00000445692 NCBP1Q09161 790 aaKnown RBP14.01□□□□□ -0.17
APLF-203ENST00000445692 SAFBQ15424 915 aaKnown RBP eCLIP14.01□□□□□ -0.17
APLF-203ENST00000445692 KIF4BQ2VIQ3 1234 aa14.01□□□□□ -0.17
APLF-203ENST00000445692 CAGE1Q8TC20 777 aa14.01□□□□□ -0.17
APLF-203ENST00000445692 KCNF1Q9H3M0 494 aa14.01□□□□□ -0.17
APLF-203ENST00000445692 PUF60Q9UHX1 559 aaKnown RBP14.01□□□□□ -0.17
APLF-203ENST00000445692 A0A0D9SFI3 127 aa14.01□□□□□ -0.17
APLF-203ENST00000445692 CASQ1P31415 396 aa14.01□□□□□ -0.17
APLF-203ENST00000445692 CLSTN2Q9H4D0 955 aa14.01□□□□□ -0.17
APLF-203ENST00000445692 C3P01024 1663 aa14.01□□□□□ -0.17
APLF-203ENST00000445692 ZSCAN20P17040 1043 aaPredicted RBP14□□□□□ -0.17
APLF-203ENST00000445692 CLEC17AQ6ZS10 378 aa14□□□□□ -0.17
APLF-203ENST00000445692 CCDC12Q8WUD4 166 aaPredicted RBP14□□□□□ -0.17
APLF-203ENST00000445692 LSG1Q9H089 658 aaKnown RBP14□□□□□ -0.17
APLF-203ENST00000445692 DBF4Q9UBU7 674 aaPredicted RBP14□□□□□ -0.17
APLF-203ENST00000445692 C11orf57Q6ZUT1 292 aaPredicted RBP14□□□□□ -0.17
APLF-203ENST00000445692 CWC15Q9P013 229 aaKnown RBP14□□□□□ -0.17
APLF-203ENST00000445692 NPATQ14207 1427 aa14□□□□□ -0.17
APLF-203ENST00000445692 A0A087WZG4 1122 aa14□□□□□ -0.17
APLF-203ENST00000445692 USP27XA6NNY8 438 aa14□□□□□ -0.17
APLF-203ENST00000445692 PPFIBP1Q86W92 1011 aa14□□□□□ -0.17
APLF-203ENST00000445692 MICU3Q86XE3 530 aa14□□□□□ -0.17
APLF-203ENST00000445692 DEPDC5O75140 1603 aa14□□□□□ -0.17
APLF-203ENST00000445692 IDH1O75874 414 aaKnown RBP13.99□□□□□ -0.17
APLF-203ENST00000445692 PPARDQ03181 441 aa13.99□□□□□ -0.17
APLF-203ENST00000445692 SPECC1Q5M775 1068 aa13.99□□□□□ -0.17
APLF-203ENST00000445692 BICC1Q9H694 974 aaKnown RBP13.99□□□□□ -0.17
APLF-203ENST00000445692 TTC39AQ5SRH9 613 aa13.99□□□□□ -0.17
APLF-203ENST00000445692 PTPRMP28827 1452 aa13.99□□□□□ -0.17
APLF-203ENST00000445692 RGS12O14924 1447 aa13.99□□□□□ -0.17
APLF-203ENST00000445692 NAP1L1P55209 391 aaKnown RBP13.99□□□□□ -0.17
APLF-203ENST00000445692 GSDMDP57764 484 aa13.99□□□□□ -0.17
APLF-203ENST00000445692 MRPS27Q92552 414 aaKnown RBP13.99□□□□□ -0.17
APLF-203ENST00000445692 SRRTQ9BXP5 876 aaKnown RBP13.99□□□□□ -0.17
APLF-203ENST00000445692 RABEP2Q9H5N1 569 aa13.99□□□□□ -0.17
APLF-203ENST00000445692 LZTFL1Q9NQ48 299 aa13.99□□□□□ -0.17
APLF-203ENST00000445692 RNF17Q9BXT8 1623 aaKnown RBP13.99□□□□□ -0.17
APLF-203ENST00000445692 IFIT1P09914 478 aaKnown RBP13.98□□□□□ -0.17
APLF-203ENST00000445692 CNNM3Q8NE01 707 aa13.98□□□□□ -0.17
APLF-203ENST00000445692 TLR7Q9NYK1 1049 aaKnown RBP13.98□□□□□ -0.17
APLF-203ENST00000445692 CTAGE5O15320 804 aa13.98□□□□□ -0.17
APLF-203ENST00000445692 CCDC144BQ3MJ40 725 aa13.98□□□□□ -0.17
APLF-203ENST00000445692 AEBP2Q6ZN18 517 aaPredicted RBP13.98□□□□□ -0.17
APLF-203ENST00000445692 PRDM4Q9UKN5 801 aa13.98□□□□□ -0.17
APLF-203ENST00000445692 NCOA3Q9Y6Q9 1424 aa13.98□□□□□ -0.17
APLF-203ENST00000445692 KLF18A0A0U1RQI7 1052 aa13.98□□□□□ -0.17
APLF-203ENST00000445692 NEMFO60524 1076 aa13.98□□□□□ -0.17
APLF-203ENST00000445692 RPS6KB1P23443 525 aa13.98□□□□□ -0.17
APLF-203ENST00000445692 DNA2P51530 1060 aa13.97□□□□□ -0.17
APLF-203ENST00000445692 USP28Q96RU2 1077 aa13.97□□□□□ -0.17
APLF-203ENST00000445692 HOOK1Q9UJC3 728 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms