RNA–Protein interactions for RNA: ENST00000444688.1

LINC00299-203, long intergenic non-protein coding RNA 299, humanhuman

TSL 4 BASIC

Gene LINC00299, Length 537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-203ENST00000444688 RTL9Q8NET4 1388 aa16.46■□□□□ 0.23
LINC00299-203ENST00000444688 ATP8B2P98198 1209 aa16.45■□□□□ 0.22
LINC00299-203ENST00000444688 C3orf67Q6ZVT6 689 aa16.45■□□□□ 0.22
LINC00299-203ENST00000444688 TNRC6CQ9HCJ0 1690 aaKnown RBP16.44■□□□□ 0.22
LINC00299-203ENST00000444688 CHMP3Q9Y3E7 222 aa16.44■□□□□ 0.22
LINC00299-203ENST00000444688 CD2APQ9Y5K6 639 aa16.44■□□□□ 0.22
LINC00299-203ENST00000444688 SRGAP3O43295 1099 aa16.43■□□□□ 0.22
LINC00299-203ENST00000444688 HMMRO75330 724 aa16.43■□□□□ 0.22
LINC00299-203ENST00000444688 CCDC57Q2TAC2 916 aa16.43■□□□□ 0.22
LINC00299-203ENST00000444688 GREM2Q9H772 168 aa16.43■□□□□ 0.22
LINC00299-203ENST00000444688 PCDHB15Q9Y5E8 787 aa16.43■□□□□ 0.22
LINC00299-203ENST00000444688 ANKRD31Q8N7Z5 1873 aa16.43■□□□□ 0.22
LINC00299-203ENST00000444688 MYH3P11055 1940 aa16.43■□□□□ 0.22
LINC00299-203ENST00000444688 ANKRD18BA2A2Z9 1011 aa16.42■□□□□ 0.22
LINC00299-203ENST00000444688 H0YIN7 160 aa16.42■□□□□ 0.22
LINC00299-203ENST00000444688 SRGNP10124 158 aa16.42■□□□□ 0.22
LINC00299-203ENST00000444688 NPR1P16066 1061 aa16.42■□□□□ 0.22
LINC00299-203ENST00000444688 HOXA10P31260 410 aaPredicted RBP16.42■□□□□ 0.22
LINC00299-203ENST00000444688 TGFB2P61812 414 aa16.42■□□□□ 0.22
LINC00299-203ENST00000444688 IFIT5Q13325 482 aaKnown RBP16.42■□□□□ 0.22
LINC00299-203ENST00000444688 FAM161AQ3B820 660 aa16.42■□□□□ 0.22
LINC00299-203ENST00000444688 DDX46Q7L014 1031 aaKnown RBP16.42■□□□□ 0.22
LINC00299-203ENST00000444688 C2CD5Q86YS7 1000 aa16.42■□□□□ 0.22
LINC00299-203ENST00000444688 SSH3Q8TE77 659 aa16.42■□□□□ 0.22
LINC00299-203ENST00000444688 RPGRQ92834 1020 aaKnown RBP16.42■□□□□ 0.22
LINC00299-203ENST00000444688 KIF13BQ9NQT8 1826 aa16.42■□□□□ 0.22
LINC00299-203ENST00000444688 PNMA6EA0A0J9YXQ4 647 aa16.41■□□□□ 0.22
LINC00299-203ENST00000444688 ITGA6P23229 1130 aa16.41■□□□□ 0.22
LINC00299-203ENST00000444688 POLA2Q14181 598 aa16.41■□□□□ 0.22
LINC00299-203ENST00000444688 MASTLQ96GX5 879 aa16.41■□□□□ 0.22
LINC00299-203ENST00000444688 RBM17Q96I25 401 aaKnown RBP16.41■□□□□ 0.22
LINC00299-203ENST00000444688 CCDC85AQ96PX6 553 aaPredicted RBP16.41■□□□□ 0.22
LINC00299-203ENST00000444688 CDC5LQ99459 802 aaKnown RBP16.41■□□□□ 0.22
LINC00299-203ENST00000444688 RFX5P48382 616 aaPredicted RBP16.4■□□□□ 0.22
LINC00299-203ENST00000444688 STYK1Q6J9G0 422 aa16.4■□□□□ 0.22
LINC00299-203ENST00000444688 SIRT2Q8IXJ6 389 aa16.4■□□□□ 0.22
LINC00299-203ENST00000444688 CRAMP1Q96RY5 1269 aa16.4■□□□□ 0.22
LINC00299-203ENST00000444688 ALDH1B1P30837 517 aa16.39■□□□□ 0.21
LINC00299-203ENST00000444688 HDAC1Q13547 482 aaPredicted RBP16.39■□□□□ 0.21
LINC00299-203ENST00000444688 GRAPQ13588 217 aa16.39■□□□□ 0.21
LINC00299-203ENST00000444688 TAF7LQ5H9L4 462 aa16.39■□□□□ 0.21
LINC00299-203ENST00000444688 GRAPLQ8TC17 118 aaPredicted RBP16.39■□□□□ 0.21
LINC00299-203ENST00000444688 COPRSQ9NQ92 184 aa16.39■□□□□ 0.21
LINC00299-203ENST00000444688 SEC31BQ9NQW1 1179 aa16.39■□□□□ 0.21
LINC00299-203ENST00000444688 PPP1R1BQ9UD71 204 aaPredicted RBP16.39■□□□□ 0.21
LINC00299-203ENST00000444688 CHRNA5P30532 468 aa16.38■□□□□ 0.21
LINC00299-203ENST00000444688 IGHMBP2P38935 993 aaKnown RBP16.38■□□□□ 0.21
LINC00299-203ENST00000444688 KLHL34Q8N239 644 aa16.38■□□□□ 0.21
LINC00299-203ENST00000444688 CNKSR1Q969H4 720 aa16.38■□□□□ 0.21
LINC00299-203ENST00000444688 RWDD1Q9H446 243 aaPredicted RBP16.38■□□□□ 0.21
LINC00299-203ENST00000444688 FBXO3Q9UK99 471 aa16.38■□□□□ 0.21
LINC00299-203ENST00000444688 COL11A2P13942 1736 aaPredicted RBP16.37■□□□□ 0.21
LINC00299-203ENST00000444688 DPEP1P16444 411 aa16.37■□□□□ 0.21
LINC00299-203ENST00000444688 RPS8P62241 208 aaKnown RBP16.37■□□□□ 0.21
LINC00299-203ENST00000444688 PTPN12Q05209 780 aaKnown RBP16.37■□□□□ 0.21
LINC00299-203ENST00000444688 ANKRD18AQ8IVF6 992 aa16.37■□□□□ 0.21
LINC00299-203ENST00000444688 ZNF622Q969S3 477 aaKnown RBP eCLIP16.37■□□□□ 0.21
LINC00299-203ENST00000444688 LRP5O75197 1615 aa16.37■□□□□ 0.21
LINC00299-203ENST00000444688 BBOX1O75936 387 aa16.36■□□□□ 0.21
LINC00299-203ENST00000444688 TMC4Q7Z404 712 aa16.36■□□□□ 0.21
LINC00299-203ENST00000444688 CELF1Q92879 486 aaKnown RBP16.36■□□□□ 0.21
LINC00299-203ENST00000444688 PPP4R2Q9NY27 417 aa16.36■□□□□ 0.21
LINC00299-203ENST00000444688 NOP58Q9Y2X3 529 aaKnown RBP16.36■□□□□ 0.21
LINC00299-203ENST00000444688 A0A0G2JLW4 131 aa16.35■□□□□ 0.21
LINC00299-203ENST00000444688 EYA2O00167 538 aa16.35■□□□□ 0.21
LINC00299-203ENST00000444688 CIAO1O76071 339 aa16.35■□□□□ 0.21
LINC00299-203ENST00000444688 KCNA3P22001 575 aa16.35■□□□□ 0.21
LINC00299-203ENST00000444688 HSP90AB4PQ58FF6 505 aa16.35■□□□□ 0.21
LINC00299-203ENST00000444688 ZNF594Q96JF6 807 aaPredicted RBP16.35■□□□□ 0.21
LINC00299-203ENST00000444688 MPHOSPH8Q99549 860 aa16.35■□□□□ 0.21
LINC00299-203ENST00000444688 FHDC1Q9C0D6 1143 aaPredicted RBP16.35■□□□□ 0.21
LINC00299-203ENST00000444688 BSDC1Q9NW68 430 aaPredicted RBP16.35■□□□□ 0.21
LINC00299-203ENST00000444688 PA2G4Q9UQ80 394 aaKnown RBP16.35■□□□□ 0.21
LINC00299-203ENST00000444688 KIAA1551Q9HCM1 1747 aa16.34■□□□□ 0.21
LINC00299-203ENST00000444688 DLEC1Q9Y238 1755 aa16.34■□□□□ 0.21
LINC00299-203ENST00000444688 SURF6O75683 361 aaKnown RBP16.34■□□□□ 0.21
LINC00299-203ENST00000444688 LDHAL6AQ6ZMR3 332 aa16.34■□□□□ 0.21
LINC00299-203ENST00000444688 TTLL6Q8N841 843 aa16.34■□□□□ 0.21
LINC00299-203ENST00000444688 KLHDC4Q8TBB5 520 aa16.34■□□□□ 0.21
LINC00299-203ENST00000444688 DCTPP1Q9H773 170 aa16.34■□□□□ 0.21
LINC00299-203ENST00000444688 PIM2Q9P1W9 311 aa16.34■□□□□ 0.21
LINC00299-203ENST00000444688 IL15P40933 162 aaPredicted RBP16.33■□□□□ 0.2
LINC00299-203ENST00000444688 G3BP1Q13283 466 aaKnown RBP eCLIP16.33■□□□□ 0.2
LINC00299-203ENST00000444688 GCC1Q96CN9 775 aa16.33■□□□□ 0.2
LINC00299-203ENST00000444688 CCDC136Q96JN2 1154 aa16.33■□□□□ 0.2
LINC00299-203ENST00000444688 CNNM1Q9NRU3 951 aa16.33■□□□□ 0.2
LINC00299-203ENST00000444688 PPEF1O14829 653 aaPredicted RBP16.32■□□□□ 0.2
LINC00299-203ENST00000444688 RAB11FIP3O75154 756 aa16.32■□□□□ 0.2
LINC00299-203ENST00000444688 IGHDP01880 384 aa16.32■□□□□ 0.2
LINC00299-203ENST00000444688 PRPF40BQ6NWY9 871 aaKnown RBP16.32■□□□□ 0.2
LINC00299-203ENST00000444688 ERC1Q8IUD2 1116 aa16.32■□□□□ 0.2
LINC00299-203ENST00000444688 NLGN2Q8NFZ4 835 aa16.32■□□□□ 0.2
LINC00299-203ENST00000444688 SYT17Q9BSW7 474 aa16.32■□□□□ 0.2
LINC00299-203ENST00000444688 PUS3Q9BZE2 481 aaKnown RBP16.32■□□□□ 0.2
LINC00299-203ENST00000444688 SIL1Q9H173 461 aa16.32■□□□□ 0.2
LINC00299-203ENST00000444688 RIPOR2Q9Y4F9 1068 aa16.32■□□□□ 0.2
LINC00299-203ENST00000444688 COL4A1P02462 1669 aa16.31■□□□□ 0.2
LINC00299-203ENST00000444688 MROH5Q6ZUA9 1318 aa16.31■□□□□ 0.2
LINC00299-203ENST00000444688 OS9Q13438 667 aaPredicted RBP16.31■□□□□ 0.2
LINC00299-203ENST00000444688 LRRC24Q50LG9 513 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 177 ms