RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 SULF1Q8IWU6 871 aa19.56■□□□□ 0.72
SYNCRIP-203ENST00000444272 LRCH3Q96II8 777 aa19.56■□□□□ 0.72
SYNCRIP-203ENST00000444272 CFHR5Q9BXR6 569 aa19.56■□□□□ 0.72
SYNCRIP-203ENST00000444272 PTPN22Q9Y2R2 807 aa19.56■□□□□ 0.72
SYNCRIP-203ENST00000444272 MKRN3Q13064 507 aaKnown RBP19.55■□□□□ 0.72
SYNCRIP-203ENST00000444272 RIC1Q4ADV7 1423 aa19.55■□□□□ 0.72
SYNCRIP-203ENST00000444272 PRAMEF22A3QJZ6 481 aa19.54■□□□□ 0.72
SYNCRIP-203ENST00000444272 HOXA10P31260 410 aaPredicted RBP19.54■□□□□ 0.72
SYNCRIP-203ENST00000444272 PRO3102Q9H379 93 aa19.54■□□□□ 0.72
SYNCRIP-203ENST00000444272 NUTM1Q86Y26 1132 aa19.53■□□□□ 0.72
SYNCRIP-203ENST00000444272 SUPT20HQ8NEM7 779 aa19.53■□□□□ 0.72
SYNCRIP-203ENST00000444272 TMX4Q9H1E5 349 aaPredicted RBP19.53■□□□□ 0.72
SYNCRIP-203ENST00000444272 PRDM6Q9NQX0 595 aa19.53■□□□□ 0.72
SYNCRIP-203ENST00000444272 GGA3Q9NZ52 723 aa19.53■□□□□ 0.72
SYNCRIP-203ENST00000444272 KIF7Q2M1P5 1343 aa19.52■□□□□ 0.72
SYNCRIP-203ENST00000444272 YDJCA8MPS7 323 aa19.52■□□□□ 0.72
SYNCRIP-203ENST00000444272 MOB2Q70IA6 237 aa19.52■□□□□ 0.72
SYNCRIP-203ENST00000444272 DPF2Q92785 391 aa19.52■□□□□ 0.72
SYNCRIP-203ENST00000444272 FKBP1BP68106 108 aa19.51■□□□□ 0.71
SYNCRIP-203ENST00000444272 KIAA2012Q0VF49 1180 aa19.51■□□□□ 0.71
SYNCRIP-203ENST00000444272 SREBF2Q12772 1141 aa19.51■□□□□ 0.71
SYNCRIP-203ENST00000444272 RBM17Q96I25 401 aaKnown RBP19.51■□□□□ 0.71
SYNCRIP-203ENST00000444272 ZNF790Q6PG37 636 aa19.5■□□□□ 0.71
SYNCRIP-203ENST00000444272 DPF3Q92784 378 aa19.5■□□□□ 0.71
SYNCRIP-203ENST00000444272 ZNF333Q96JL9 665 aa19.5■□□□□ 0.71
SYNCRIP-203ENST00000444272 CRAMP1Q96RY5 1269 aa19.5■□□□□ 0.71
SYNCRIP-203ENST00000444272 RTFDC1Q9BY42 306 aaPredicted RBP19.5■□□□□ 0.71
SYNCRIP-203ENST00000444272 ASTN2O75129 1339 aaPredicted RBP19.5■□□□□ 0.71
SYNCRIP-203ENST00000444272 UBE2Q2LH0YL09 131 aa19.49■□□□□ 0.71
SYNCRIP-203ENST00000444272 SLC4A8Q2Y0W8 1093 aa19.49■□□□□ 0.71
SYNCRIP-203ENST00000444272 ATP6V0A2Q9Y487 856 aa19.48■□□□□ 0.71
SYNCRIP-203ENST00000444272 ZNF609O15014 1411 aa19.48■□□□□ 0.71
SYNCRIP-203ENST00000444272 PSMD14O00487 310 aa19.47■□□□□ 0.71
SYNCRIP-203ENST00000444272 KIF4BQ2VIQ3 1234 aa19.47■□□□□ 0.71
SYNCRIP-203ENST00000444272 DPP8Q6V1X1 898 aaPredicted RBP19.47■□□□□ 0.71
SYNCRIP-203ENST00000444272 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.47■□□□□ 0.713e-6■■■□□ 15.9
SYNCRIP-203ENST00000444272 MPNDQ8N594 471 aa19.47■□□□□ 0.71
SYNCRIP-203ENST00000444272 FMNL2Q96PY5 1086 aa19.47■□□□□ 0.71
SYNCRIP-203ENST00000444272 NYXQ9GZU5 481 aa19.47■□□□□ 0.71
SYNCRIP-203ENST00000444272 STXBP5LQ9Y2K9 1186 aa19.47■□□□□ 0.71
SYNCRIP-203ENST00000444272 HLFQ16534 295 aa19.46■□□□□ 0.71
SYNCRIP-203ENST00000444272 CD99L2Q8TCZ2 262 aa19.46■□□□□ 0.71
SYNCRIP-203ENST00000444272 MYCP01106 439 aaPredicted RBP19.45■□□□□ 0.7
SYNCRIP-203ENST00000444272 DEFB123Q8N688 67 aa19.45■□□□□ 0.7
SYNCRIP-203ENST00000444272 ERO1AQ96HE7 468 aa19.45■□□□□ 0.7
SYNCRIP-203ENST00000444272 A0A1W2PPC1 479 aa19.44■□□□□ 0.7
SYNCRIP-203ENST00000444272 WTIPA6NIX2 430 aaPredicted RBP19.44■□□□□ 0.7
SYNCRIP-203ENST00000444272 ALDH1A1P00352 501 aa19.44■□□□□ 0.7
SYNCRIP-203ENST00000444272 COL9A1P20849 921 aa19.44■□□□□ 0.7
SYNCRIP-203ENST00000444272 EFCC1Q9HA90 598 aa19.44■□□□□ 0.7
SYNCRIP-203ENST00000444272 LAMB4A4D0S4 1761 aa19.44■□□□□ 0.7
SYNCRIP-203ENST00000444272 SIPA1L3O60292 1781 aaPredicted RBP19.44■□□□□ 0.7
SYNCRIP-203ENST00000444272 RGL2O15211 777 aa19.43■□□□□ 0.7
SYNCRIP-203ENST00000444272 MTHFSDQ2M296 383 aaKnown RBP19.43■□□□□ 0.7
SYNCRIP-203ENST00000444272 ANGEL2Q5VTE6 544 aaKnown RBP19.43■□□□□ 0.7
SYNCRIP-203ENST00000444272 ANKRD13DQ6ZTN6 518 aa19.43■□□□□ 0.7
SYNCRIP-203ENST00000444272 USP16Q9Y5T5 823 aa19.43■□□□□ 0.7
SYNCRIP-203ENST00000444272 EYSQ5T1H1 3165 aa19.42■□□□□ 0.7
SYNCRIP-203ENST00000444272 TTLL12Q14166 644 aaPredicted RBP19.42■□□□□ 0.7
SYNCRIP-203ENST00000444272 C3orf67Q6ZVT6 689 aa19.42■□□□□ 0.7
SYNCRIP-203ENST00000444272 Q7L0L9 218 aa19.42■□□□□ 0.7
SYNCRIP-203ENST00000444272 KDM3BQ7LBC6 1761 aa19.42■□□□□ 0.7
SYNCRIP-203ENST00000444272 RPS12P25398 132 aaKnown RBP19.41■□□□□ 0.7
SYNCRIP-203ENST00000444272 TEFQ10587 303 aa19.41■□□□□ 0.7
SYNCRIP-203ENST00000444272 SLC9C1Q4G0N8 1177 aa19.41■□□□□ 0.7
SYNCRIP-203ENST00000444272 CDCA8Q53HL2 280 aa19.41■□□□□ 0.7
SYNCRIP-203ENST00000444272 NBPF11Q86T75 865 aa19.41■□□□□ 0.7
SYNCRIP-203ENST00000444272 ERBB4Q15303 1308 aa19.4■□□□□ 0.7
SYNCRIP-203ENST00000444272 MUC3AQ02505 3323 aa19.39■□□□□ 0.69
SYNCRIP-203ENST00000444272 DBNDD1Q9H9R9 158 aa19.39■□□□□ 0.69
SYNCRIP-203ENST00000444272 SCAF8Q9UPN6 1271 aaKnown RBP19.39■□□□□ 0.69
SYNCRIP-203ENST00000444272 ABCC4O15439 1325 aa19.39■□□□□ 0.69
SYNCRIP-203ENST00000444272 KCNQ3O43525 872 aa19.38■□□□□ 0.69
SYNCRIP-203ENST00000444272 IL13P35225 146 aa19.38■□□□□ 0.69
SYNCRIP-203ENST00000444272 CAP1Q01518 475 aa19.38■□□□□ 0.69
SYNCRIP-203ENST00000444272 DUOX1Q9NRD9 1551 aa19.38■□□□□ 0.69
SYNCRIP-203ENST00000444272 NUP98P52948 1817 aa19.37■□□□□ 0.69
SYNCRIP-203ENST00000444272 HMOX1P09601 288 aa19.37■□□□□ 0.69
SYNCRIP-203ENST00000444272 TCIRG1Q13488 830 aa19.37■□□□□ 0.69
SYNCRIP-203ENST00000444272 SCARF1Q14162 830 aa19.37■□□□□ 0.69
SYNCRIP-203ENST00000444272 PRAMEF18Q5VWM3 479 aa19.37■□□□□ 0.69
SYNCRIP-203ENST00000444272 IFNL1Q8IU54 200 aa19.37■□□□□ 0.69
SYNCRIP-203ENST00000444272 PTCH2Q9Y6C5 1203 aa19.37■□□□□ 0.69
SYNCRIP-203ENST00000444272 NBPF26B4DH59 902 aa19.36■□□□□ 0.69
SYNCRIP-203ENST00000444272 GPR153Q6NV75 609 aa19.36■□□□□ 0.69
SYNCRIP-203ENST00000444272 NBPF10Q6P3W6 841 aaKnown RBP19.36■□□□□ 0.69
SYNCRIP-203ENST00000444272 SP8Q8IXZ3 490 aa19.36■□□□□ 0.69
SYNCRIP-203ENST00000444272 NR2E3Q9Y5X4 410 aa19.36■□□□□ 0.69
SYNCRIP-203ENST00000444272 KCNQ5Q9NR82 932 aa19.35■□□□□ 0.69
SYNCRIP-203ENST00000444272 MTMR10Q9NXD2 777 aa19.35■□□□□ 0.69
SYNCRIP-203ENST00000444272 RAPGEFL1Q9UHV5 662 aa19.35■□□□□ 0.69
SYNCRIP-203ENST00000444272 RTL9Q8NET4 1388 aa19.34■□□□□ 0.69
SYNCRIP-203ENST00000444272 IBTKQ9P2D0 1353 aaPredicted RBP19.34■□□□□ 0.69
SYNCRIP-203ENST00000444272 ZBTB7BO15156 539 aaPredicted RBP19.34■□□□□ 0.69
SYNCRIP-203ENST00000444272 SPRYD7Q5W111 196 aa19.34■□□□□ 0.69
SYNCRIP-203ENST00000444272 HTATIP2Q9BUP3 242 aa19.34■□□□□ 0.69
SYNCRIP-203ENST00000444272 DDX60Q8IY21 1712 aaKnown RBP19.34■□□□□ 0.69
SYNCRIP-203ENST00000444272 UBN2Q6ZU65 1347 aa19.33■□□□□ 0.69
SYNCRIP-203ENST00000444272 IGF2BP3O00425 579 aaKnown RBP eCLIP19.33■□□□□ 0.68
SYNCRIP-203ENST00000444272 GPTP24298 496 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms