RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 UTP14AQ9BVJ6 771 aaKnown RBP19.07■□□□□ 0.64
HMGN1-208ENST00000443046 MCOLN1Q9GZU1 580 aa19.07■□□□□ 0.64
HMGN1-208ENST00000443046 CIAPIN1Q6FI81 312 aa19.06■□□□□ 0.64
HMGN1-208ENST00000443046 THUMPD2Q9BTF0 503 aaKnown RBP19.06■□□□□ 0.64
HMGN1-208ENST00000443046 TMX4Q9H1E5 349 aaPredicted RBP19.06■□□□□ 0.64
HMGN1-208ENST00000443046 NFE2L2Q16236 605 aa19.05■□□□□ 0.64
HMGN1-208ENST00000443046 DPP8Q6V1X1 898 aaPredicted RBP19.05■□□□□ 0.64
HMGN1-208ENST00000443046 CDC37L1Q7L3B6 337 aa19.05■□□□□ 0.64
HMGN1-208ENST00000443046 TNIP1Q15025 636 aa19.04■□□□□ 0.64
HMGN1-208ENST00000443046 MPNDQ8N594 471 aa19.04■□□□□ 0.64
HMGN1-208ENST00000443046 TRPM4Q8TD43 1214 aa19.04■□□□□ 0.64
HMGN1-208ENST00000443046 YDJCA8MPS7 323 aa19.03■□□□□ 0.64
HMGN1-208ENST00000443046 RAD17O75943 681 aa19.03■□□□□ 0.64
HMGN1-208ENST00000443046 ZIC5Q96T25 663 aa19.03■□□□□ 0.64
HMGN1-208ENST00000443046 DUOX1Q9NRD9 1551 aa19.02■□□□□ 0.64
HMGN1-208ENST00000443046 NOGQ13253 232 aa19.02■□□□□ 0.64
HMGN1-208ENST00000443046 PROSER3Q2NL68 480 aa19.02■□□□□ 0.64
HMGN1-208ENST00000443046 CNOT7Q9UIV1 285 aaKnown RBP19.02■□□□□ 0.64
HMGN1-208ENST00000443046 TAF1P21675 1872 aa19.01■□□□□ 0.63
HMGN1-208ENST00000443046 PDE4DIPQ5VU43 2346 aa19.01■□□□□ 0.63
HMGN1-208ENST00000443046 LRRC37AA6NMS7 1700 aa19.01■□□□□ 0.63
HMGN1-208ENST00000443046 SHTN1A0MZ66 631 aa19.01■□□□□ 0.63
HMGN1-208ENST00000443046 NEFMP07197 916 aa19.01■□□□□ 0.63
HMGN1-208ENST00000443046 NLRP10Q86W26 655 aa19.01■□□□□ 0.63
HMGN1-208ENST00000443046 BCL2L13Q9BXK5 485 aa19.01■□□□□ 0.63
HMGN1-208ENST00000443046 HCLS1P14317 486 aaPredicted RBP19■□□□□ 0.63
HMGN1-208ENST00000443046 GRAPQ13588 217 aa19■□□□□ 0.63
HMGN1-208ENST00000443046 GRAPLQ8TC17 118 aaPredicted RBP19■□□□□ 0.63
HMGN1-208ENST00000443046 DPF2Q92785 391 aa19■□□□□ 0.63
HMGN1-208ENST00000443046 ZNF408Q9H9D4 720 aa19■□□□□ 0.63
HMGN1-208ENST00000443046 PCDH10Q9P2E7 1040 aa19■□□□□ 0.63
HMGN1-208ENST00000443046 POLR2AP24928 1970 aaKnown RBP19■□□□□ 0.63
HMGN1-208ENST00000443046 FAM155AB1AL88 458 aaPredicted RBP18.99■□□□□ 0.63
HMGN1-208ENST00000443046 DGKZQ13574 1117 aa18.99■□□□□ 0.63
HMGN1-208ENST00000443046 BABAM1Q9NWV8 329 aa18.99■□□□□ 0.63
HMGN1-208ENST00000443046 H7C1D1 291 aa18.98■□□□□ 0.63
HMGN1-208ENST00000443046 ANXA1P04083 346 aa18.98■□□□□ 0.63
HMGN1-208ENST00000443046 HUNKP57058 714 aa18.98■□□□□ 0.63
HMGN1-208ENST00000443046 TCIRG1Q13488 830 aa18.98■□□□□ 0.63
HMGN1-208ENST00000443046 HSP90AB3PQ58FF7 597 aa18.98■□□□□ 0.63
HMGN1-208ENST00000443046 DLK2Q6UY11 383 aa18.98■□□□□ 0.63
HMGN1-208ENST00000443046 DDX46Q7L014 1031 aaKnown RBP18.98■□□□□ 0.63
HMGN1-208ENST00000443046 TMC4Q7Z404 712 aa18.98■□□□□ 0.63
HMGN1-208ENST00000443046 USP48Q86UV5 1035 aa18.98■□□□□ 0.63
HMGN1-208ENST00000443046 MICALL2Q8IY33 904 aa18.98■□□□□ 0.63
HMGN1-208ENST00000443046 TSPYL4Q9UJ04 414 aa18.98■□□□□ 0.63
HMGN1-208ENST00000443046 EIF2S2P20042 333 aaKnown RBP18.97■□□□□ 0.63
HMGN1-208ENST00000443046 COPS6Q7L5N1 327 aa18.97■□□□□ 0.63
HMGN1-208ENST00000443046 SH3TC1Q8TE82 1336 aa18.97■□□□□ 0.63
HMGN1-208ENST00000443046 SAGE1Q9NXZ1 904 aa18.96■□□□□ 0.63
HMGN1-208ENST00000443046 TRMT112Q9UI30 125 aaKnown RBP18.96■□□□□ 0.63
HMGN1-208ENST00000443046 ZBTB12Q9Y330 459 aaPredicted RBP18.96■□□□□ 0.63
HMGN1-208ENST00000443046 PSMD14O00487 310 aa18.95■□□□□ 0.62
HMGN1-208ENST00000443046 EGFRP00533 1210 aa18.95■□□□□ 0.62
HMGN1-208ENST00000443046 RGMBQ6NW40 437 aa18.95■□□□□ 0.62
HMGN1-208ENST00000443046 SAMD7Q7Z3H4 446 aa18.95■□□□□ 0.62
HMGN1-208ENST00000443046 XAGE3Q8WTP9 111 aa18.95■□□□□ 0.62
HMGN1-208ENST00000443046 PNNQ9H307 717 aaKnown RBP18.95■□□□□ 0.62
HMGN1-208ENST00000443046 DDX60Q8IY21 1712 aaKnown RBP18.94■□□□□ 0.62
HMGN1-208ENST00000443046 CFAP44Q96MT7 982 aa18.94■□□□□ 0.62
HMGN1-208ENST00000443046 RPS12P25398 132 aaKnown RBP18.93■□□□□ 0.62
HMGN1-208ENST00000443046 SF3B3Q15393 1217 aaKnown RBP18.93■□□□□ 0.62
HMGN1-208ENST00000443046 WASHC4Q2M389 1173 aa18.93■□□□□ 0.62
HMGN1-208ENST00000443046 KRT26Q7Z3Y9 468 aa18.93■□□□□ 0.62
HMGN1-208ENST00000443046 CCDC102AQ96A19 550 aa18.93■□□□□ 0.62
HMGN1-208ENST00000443046 GBA2Q9HCG7 927 aaPredicted RBP18.93■□□□□ 0.62
HMGN1-208ENST00000443046 MAPK8IP3Q9UPT6 1336 aa18.93■□□□□ 0.62
HMGN1-208ENST00000443046 AIMP1Q12904 312 aaKnown RBP18.92■□□□□ 0.62
HMGN1-208ENST00000443046 POLLQ9UGP5 575 aa18.92■□□□□ 0.62
HMGN1-208ENST00000443046 RTL9Q8NET4 1388 aa18.92■□□□□ 0.62
HMGN1-208ENST00000443046 COL4A1P02462 1669 aa18.92■□□□□ 0.62
HMGN1-208ENST00000443046 KIF23Q02241 960 aaPredicted RBP18.91■□□□□ 0.62
HMGN1-208ENST00000443046 TBC1D10BQ4KMP7 808 aaPredicted RBP18.91■□□□□ 0.62
HMGN1-208ENST00000443046 C2orf69Q8N8R5 385 aa18.91■□□□□ 0.62
HMGN1-208ENST00000443046 CELF1Q92879 486 aaKnown RBP18.91■□□□□ 0.62
HMGN1-208ENST00000443046 DBNDD1Q9H9R9 158 aa18.91■□□□□ 0.62
HMGN1-208ENST00000443046 KCNQ5Q9NR82 932 aa18.91■□□□□ 0.62
HMGN1-208ENST00000443046 RNF186Q9NXI6 227 aa18.91■□□□□ 0.62
HMGN1-208ENST00000443046 AKAP11Q9UKA4 1901 aa18.9■□□□□ 0.62
HMGN1-208ENST00000443046 ADM5C9JUS6 153 aa18.9■□□□□ 0.62
HMGN1-208ENST00000443046 RIPK4P57078 832 aa18.9■□□□□ 0.62
HMGN1-208ENST00000443046 NSFL1CQ9UNZ2 370 aaKnown RBP18.9■□□□□ 0.62
HMGN1-208ENST00000443046 SCN9AQ15858 1988 aa18.9■□□□□ 0.62
HMGN1-208ENST00000443046 GPSM2P81274 684 aa18.89■□□□□ 0.61
HMGN1-208ENST00000443046 NECTIN2Q92692 538 aa18.89■□□□□ 0.61
HMGN1-208ENST00000443046 DCPSQ96C86 337 aaKnown RBP18.89■□□□□ 0.61
HMGN1-208ENST00000443046 ISCA1Q9BUE6 129 aa18.89■□□□□ 0.61
HMGN1-208ENST00000443046 ECE2O60344 883 aa18.88■□□□□ 0.61
HMGN1-208ENST00000443046 SLC10A3P09131 477 aa18.88■□□□□ 0.61
HMGN1-208ENST00000443046 VIL1P09327 827 aaKnown RBP18.88■□□□□ 0.61
HMGN1-208ENST00000443046 ZNF157P51786 506 aaPredicted RBP18.88■□□□□ 0.61
HMGN1-208ENST00000443046 CSRNP1Q96S65 589 aa18.88■□□□□ 0.61
HMGN1-208ENST00000443046 CHL1O00533 1208 aa18.87■□□□□ 0.61
HMGN1-208ENST00000443046 RIMBP2O15034 1052 aa18.87■□□□□ 0.61
HMGN1-208ENST00000443046 TRPA1O75762 1119 aa18.87■□□□□ 0.61
HMGN1-208ENST00000443046 TMPOP42166 694 aaKnown RBP18.87■□□□□ 0.61
HMGN1-208ENST00000443046 PLBD2Q8NHP8 589 aa18.87■□□□□ 0.61
HMGN1-208ENST00000443046 TBC1D16Q8TBP0 767 aa18.87■□□□□ 0.61
HMGN1-208ENST00000443046 FAM89AQ96GI7 184 aa18.87■□□□□ 0.61
HMGN1-208ENST00000443046 ZNF609O15014 1411 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms