RNA–Protein interactions for RNA: ENST00000442019.6

CAGE1-204, Transcript of cancer antigen 1, humanhuman

TSL 1 (best)

Gene CAGE1, Length 2,832 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-204ENST00000442019 TPCN1Q9ULQ1 816 aa8.43□□□□□ -1.06
CAGE1-204ENST00000442019 MRC1P22897 1456 aa8.43□□□□□ -1.06
CAGE1-204ENST00000442019 PIP4K2BP78356 416 aa8.43□□□□□ -1.06
CAGE1-204ENST00000442019 CCDC144BQ3MJ40 725 aa8.43□□□□□ -1.06
CAGE1-204ENST00000442019 CREB3L3Q68CJ9 461 aa8.43□□□□□ -1.06
CAGE1-204ENST00000442019 PRPF40BQ6NWY9 871 aaKnown RBP8.43□□□□□ -1.06
CAGE1-204ENST00000442019 CCDC144CPQ8IYA2 1237 aa8.43□□□□□ -1.06
CAGE1-204ENST00000442019 CCDC150Q8NCX0 1101 aa8.43□□□□□ -1.06
CAGE1-204ENST00000442019 ZNF215Q9UL58 517 aaPredicted RBP8.43□□□□□ -1.06
CAGE1-204ENST00000442019 CYP2C19P33261 490 aa8.42□□□□□ -1.06
CAGE1-204ENST00000442019 RESTQ13127 1097 aa8.42□□□□□ -1.06
CAGE1-204ENST00000442019 KRT32Q14532 448 aa8.42□□□□□ -1.06
CAGE1-204ENST00000442019 FBXO38Q6PIJ6 1188 aa8.42□□□□□ -1.06
CAGE1-204ENST00000442019 STAG3Q9UJ98 1225 aa8.42□□□□□ -1.06
CAGE1-204ENST00000442019 RBM8AQ9Y5S9 174 aaKnown RBP8.42□□□□□ -1.06
CAGE1-204ENST00000442019 ERBB3P21860 1342 aa8.42□□□□□ -1.06
CAGE1-204ENST00000442019 TPM1P09493 284 aa8.42□□□□□ -1.06
CAGE1-204ENST00000442019 SKILP12757 684 aa8.42□□□□□ -1.06
CAGE1-204ENST00000442019 KCNA6P17658 529 aa8.42□□□□□ -1.06
CAGE1-204ENST00000442019 CDK11BP21127 795 aaKnown RBP8.42□□□□□ -1.06
CAGE1-204ENST00000442019 RPS6KB1P23443 525 aa8.42□□□□□ -1.06
CAGE1-204ENST00000442019 PTH1RQ03431 593 aa8.42□□□□□ -1.06
CAGE1-204ENST00000442019 CAMK4Q16566 473 aa8.42□□□□□ -1.06
CAGE1-204ENST00000442019 ADCK5Q3MIX3 580 aa8.42□□□□□ -1.06
CAGE1-204ENST00000442019 BLOC1S2Q6QNY1 142 aa8.42□□□□□ -1.06
CAGE1-204ENST00000442019 CKAP2LQ8IYA6 745 aa8.42□□□□□ -1.06
CAGE1-204ENST00000442019 CLASRPQ8N2M8 674 aaKnown RBP8.42□□□□□ -1.06
CAGE1-204ENST00000442019 BICD2Q8TD16 824 aa8.42□□□□□ -1.06
CAGE1-204ENST00000442019 BPIFA3Q9BQP9 254 aa8.42□□□□□ -1.06
CAGE1-204ENST00000442019 SRRTQ9BXP5 876 aaKnown RBP8.42□□□□□ -1.06
CAGE1-204ENST00000442019 DNAJC25Q9H1X3 360 aa8.42□□□□□ -1.06
CAGE1-204ENST00000442019 ANO10Q9NW15 660 aa8.42□□□□□ -1.06
CAGE1-204ENST00000442019 SPG7Q9UQ90 795 aa8.42□□□□□ -1.06
CAGE1-204ENST00000442019 PRR36Q9H6K5 1346 aa8.42□□□□□ -1.06
CAGE1-204ENST00000442019 MED23Q9ULK4 1368 aa8.42□□□□□ -1.06
CAGE1-204ENST00000442019 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.41□□□□□ -1.06
CAGE1-204ENST00000442019 CCDC69A6NI79 296 aa8.41□□□□□ -1.06
CAGE1-204ENST00000442019 GNAT3A8MTJ3 354 aa8.41□□□□□ -1.06
CAGE1-204ENST00000442019 SRGAP3O43295 1099 aa8.41□□□□□ -1.06
CAGE1-204ENST00000442019 NRDCO43847 1150 aa8.41□□□□□ -1.06
CAGE1-204ENST00000442019 LLPHQ9BRT6 129 aaKnown RBP8.41□□□□□ -1.06
CAGE1-204ENST00000442019 NAT10Q9H0A0 1025 aaKnown RBP8.41□□□□□ -1.06
CAGE1-204ENST00000442019 ADCY9O60503 1353 aa8.41□□□□□ -1.06
CAGE1-204ENST00000442019 METP08581 1390 aa8.41□□□□□ -1.06
CAGE1-204ENST00000442019 ABCC6O95255 1503 aa8.41□□□□□ -1.06
CAGE1-204ENST00000442019 COL22A1Q8NFW1 1626 aaPredicted RBP8.41□□□□□ -1.06
CAGE1-204ENST00000442019 SLC27A2O14975 620 aa8.41□□□□□ -1.06
CAGE1-204ENST00000442019 NR1I2O75469 434 aa8.41□□□□□ -1.06
CAGE1-204ENST00000442019 IRX5P78411 483 aaPredicted RBP8.41□□□□□ -1.06
CAGE1-204ENST00000442019 CCDC93Q567U6 631 aa8.41□□□□□ -1.06
CAGE1-204ENST00000442019 FILIP1Q7Z7B0 1213 aa8.41□□□□□ -1.06
CAGE1-204ENST00000442019 IPO4Q8TEX9 1081 aaKnown RBP8.41□□□□□ -1.06
CAGE1-204ENST00000442019 PGBD1Q96JS3 809 aa8.41□□□□□ -1.06
CAGE1-204ENST00000442019 NOL10Q9BSC4 688 aaKnown RBP8.41□□□□□ -1.06
CAGE1-204ENST00000442019 ARGLU1Q9NWB6 273 aaPredicted RBP8.41□□□□□ -1.06
CAGE1-204ENST00000442019 HSP90AB2PQ58FF8 381 aa8.4□□□□□ -1.06
CAGE1-204ENST00000442019 MUM1L1Q5H9M0 696 aa8.4□□□□□ -1.06
CAGE1-204ENST00000442019 TEX35Q5T0J7 233 aa8.4□□□□□ -1.06
CAGE1-204ENST00000442019 NAA16Q6N069 864 aaPredicted RBP8.4□□□□□ -1.06
CAGE1-204ENST00000442019 CHMP4CQ96CF2 233 aa8.4□□□□□ -1.06
CAGE1-204ENST00000442019 SPATA31A6Q5VVP1 1343 aa8.4□□□□□ -1.06
CAGE1-204ENST00000442019 PHLPP2Q6ZVD8 1323 aa8.4□□□□□ -1.06
CAGE1-204ENST00000442019 NCAPD2Q15021 1401 aa8.4□□□□□ -1.06
CAGE1-204ENST00000442019 MAP4K4O95819 1239 aaPredicted RBP8.4□□□□□ -1.06
CAGE1-204ENST00000442019 HDGFP51858 240 aaKnown RBP8.4□□□□□ -1.06
CAGE1-204ENST00000442019 TPM4P67936 248 aa8.4□□□□□ -1.06
CAGE1-204ENST00000442019 TAF7Q15545 349 aaPredicted RBP8.4□□□□□ -1.06
CAGE1-204ENST00000442019 ELF2Q15723 593 aa8.4□□□□□ -1.06
CAGE1-204ENST00000442019 CEP57L1Q8IYX8 460 aa8.4□□□□□ -1.06
CAGE1-204ENST00000442019 GTF3C6Q969F1 213 aa8.4□□□□□ -1.06
CAGE1-204ENST00000442019 RCOR1Q9UKL0 485 aa8.4□□□□□ -1.06
CAGE1-204ENST00000442019 ALDH1L1O75891 902 aa8.39□□□□□ -1.07
CAGE1-204ENST00000442019 CPA1P15085 419 aa8.39□□□□□ -1.07
CAGE1-204ENST00000442019 KCNJ4P48050 445 aa8.39□□□□□ -1.07
CAGE1-204ENST00000442019 SNW1Q13573 536 aaKnown RBP8.39□□□□□ -1.07
CAGE1-204ENST00000442019 BEND3Q5T5X7 828 aa8.39□□□□□ -1.07
CAGE1-204ENST00000442019 USPL1Q5W0Q7 1092 aa8.39□□□□□ -1.07
CAGE1-204ENST00000442019 LARP1Q6PKG0 1096 aaKnown RBP8.39□□□□□ -1.07
CAGE1-204ENST00000442019 TXLNBQ8N3L3 684 aa8.39□□□□□ -1.07
CAGE1-204ENST00000442019 NECAB1Q8N987 351 aa8.39□□□□□ -1.07
CAGE1-204ENST00000442019 MIS18AQ9NYP9 233 aa8.39□□□□□ -1.07
CAGE1-204ENST00000442019 PIK3C2AO00443 1686 aa8.39□□□□□ -1.07
CAGE1-204ENST00000442019 LMO7Q8WWI1 1683 aa8.39□□□□□ -1.07
CAGE1-204ENST00000442019 BECN2A8MW95 431 aa8.39□□□□□ -1.07
CAGE1-204ENST00000442019 IGSF3O75054 1194 aa8.39□□□□□ -1.07
CAGE1-204ENST00000442019 TOB2Q14106 344 aaPredicted RBP8.39□□□□□ -1.07
CAGE1-204ENST00000442019 NAA30Q147X3 362 aaPredicted RBP8.39□□□□□ -1.07
CAGE1-204ENST00000442019 HDGFL1Q5TGJ6 251 aa8.39□□□□□ -1.07
CAGE1-204ENST00000442019 TICAM2Q86XR7 235 aa8.39□□□□□ -1.07
CAGE1-204ENST00000442019 DHX40Q8IX18 779 aaKnown RBP8.39□□□□□ -1.07
CAGE1-204ENST00000442019 ZNF592Q92610 1267 aa8.39□□□□□ -1.07
CAGE1-204ENST00000442019 ZNF446Q9NWS9 450 aa8.39□□□□□ -1.07
CAGE1-204ENST00000442019 V9GYY5 206 aaPredicted RBP8.39□□□□□ -1.07
CAGE1-204ENST00000442019 CEMIPQ8WUJ3 1361 aa8.39□□□□□ -1.07
CAGE1-204ENST00000442019 ACEP12821 1306 aa8.39□□□□□ -1.07
CAGE1-204ENST00000442019 USP27XA6NNY8 438 aa8.39□□□□□ -1.07
CAGE1-204ENST00000442019 CCDC73Q6ZRK6 1079 aa8.39□□□□□ -1.07
CAGE1-204ENST00000442019 FCHSD1Q86WN1 690 aa8.39□□□□□ -1.07
CAGE1-204ENST00000442019 SMARCC2Q8TAQ2 1214 aa8.39□□□□□ -1.07
CAGE1-204ENST00000442019 LARP6Q9BRS8 491 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms