RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 PARP10Q53GL7 1025 aa15.94■□□□□ 0.14
CPSF4-206ENST00000441580 ATG9AQ7Z3C6 839 aa15.94■□□□□ 0.14
CPSF4-206ENST00000441580 FSD1Q9BTV5 496 aa15.94■□□□□ 0.14
CPSF4-206ENST00000441580 SNRKQ9NRH2 765 aa15.94■□□□□ 0.14
CPSF4-206ENST00000441580 MED23Q9ULK4 1368 aa15.94■□□□□ 0.14
CPSF4-206ENST00000441580 LY75O60449 1722 aa15.94■□□□□ 0.14
CPSF4-206ENST00000441580 DDX60Q8IY21 1712 aaKnown RBP15.94■□□□□ 0.14
CPSF4-206ENST00000441580 CSF1RP07333 972 aa15.93■□□□□ 0.14
CPSF4-206ENST00000441580 DDIT3P35638 169 aa15.93■□□□□ 0.14
CPSF4-206ENST00000441580 IFIT5Q13325 482 aaKnown RBP15.93■□□□□ 0.14
CPSF4-206ENST00000441580 TAF7LQ5H9L4 462 aa15.93■□□□□ 0.14
CPSF4-206ENST00000441580 MEX3CQ5U5Q3 659 aaKnown RBP15.93■□□□□ 0.14
CPSF4-206ENST00000441580 INTS5Q6P9B9 1019 aaKnown RBP15.93■□□□□ 0.14
CPSF4-206ENST00000441580 ZNF34Q8IZ26 560 aa15.93■□□□□ 0.14
CPSF4-206ENST00000441580 ARXQ96QS3 562 aa15.93■□□□□ 0.14
CPSF4-206ENST00000441580 LSG1Q9H089 658 aaKnown RBP15.93■□□□□ 0.14
CPSF4-206ENST00000441580 AKAP2Q9Y2D5 859 aa15.93■□□□□ 0.14
CPSF4-206ENST00000441580 ZNF652Q9Y2D9 606 aa15.93■□□□□ 0.14
CPSF4-206ENST00000441580 MYH14Q7Z406 1995 aaKnown RBP15.93■□□□□ 0.14
CPSF4-206ENST00000441580 COL24A1Q17RW2 1714 aa15.92■□□□□ 0.14
CPSF4-206ENST00000441580 CD2BP2O95400 341 aaKnown RBP15.92■□□□□ 0.14
CPSF4-206ENST00000441580 HLFQ16534 295 aa15.92■□□□□ 0.14
CPSF4-206ENST00000441580 CWC27Q6UX04 472 aaKnown RBP15.92■□□□□ 0.14
CPSF4-206ENST00000441580 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.92■□□□□ 0.14
CPSF4-206ENST00000441580 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.92■□□□□ 0.14
CPSF4-206ENST00000441580 CCDC171Q6TFL3 1326 aa15.92■□□□□ 0.14
CPSF4-206ENST00000441580 PDE8AO60658 829 aa15.91■□□□□ 0.14
CPSF4-206ENST00000441580 GPTP24298 496 aa15.91■□□□□ 0.14
CPSF4-206ENST00000441580 ITPK1Q13572 414 aa15.91■□□□□ 0.14
CPSF4-206ENST00000441580 FAM89AQ96GI7 184 aa15.91■□□□□ 0.14
CPSF4-206ENST00000441580 HAUS7Q99871 368 aa15.91■□□□□ 0.14
CPSF4-206ENST00000441580 DBNDD2Q9BQY9 259 aa15.91■□□□□ 0.14
CPSF4-206ENST00000441580 BOLA2Q9H3K6 86 aa15.91■□□□□ 0.14
CPSF4-206ENST00000441580 CEP126Q9P2H0 1117 aa15.91■□□□□ 0.14
CPSF4-206ENST00000441580 TRMT112Q9UI30 125 aaKnown RBP15.91■□□□□ 0.14
CPSF4-206ENST00000441580 UBN2Q6ZU65 1347 aa15.91■□□□□ 0.14
CPSF4-206ENST00000441580 SH3TC1Q8TE82 1336 aa15.91■□□□□ 0.14
CPSF4-206ENST00000441580 RTL9Q8NET4 1388 aa15.9■□□□□ 0.14
CPSF4-206ENST00000441580 SBF2Q86WG5 1849 aa15.9■□□□□ 0.14
CPSF4-206ENST00000441580 ANKRD18BA2A2Z9 1011 aa15.9■□□□□ 0.14
CPSF4-206ENST00000441580 IRS4O14654 1257 aaPredicted RBP15.9■□□□□ 0.14
CPSF4-206ENST00000441580 CAMTA2O94983 1202 aa15.9■□□□□ 0.14
CPSF4-206ENST00000441580 IL25Q9H293 177 aa15.9■□□□□ 0.14
CPSF4-206ENST00000441580 NMIQ13287 307 aaPredicted RBP15.89■□□□□ 0.13
CPSF4-206ENST00000441580 TBC1D2BQ9UPU7 963 aa15.89■□□□□ 0.13
CPSF4-206ENST00000441580 TAF1LQ8IZX4 1826 aa15.89■□□□□ 0.13
CPSF4-206ENST00000441580 A0A1B0GUL7 405 aa15.88■□□□□ 0.13
CPSF4-206ENST00000441580 LRRFIP1Q32MZ4 808 aaKnown RBP15.88■□□□□ 0.13
CPSF4-206ENST00000441580 SPRYD3Q8NCJ5 442 aa15.88■□□□□ 0.13
CPSF4-206ENST00000441580 TTLL11Q8NHH1 800 aa15.88■□□□□ 0.13
CPSF4-206ENST00000441580 UTP14AQ9BVJ6 771 aaKnown RBP15.88■□□□□ 0.13
CPSF4-206ENST00000441580 CWC22Q9HCG8 908 aaKnown RBP15.88■□□□□ 0.13
CPSF4-206ENST00000441580 PALD1Q9ULE6 856 aa15.88■□□□□ 0.13
CPSF4-206ENST00000441580 DDX11L8A8MPP1 907 aa15.87■□□□□ 0.13
CPSF4-206ENST00000441580 ITGA6P23229 1130 aa15.87■□□□□ 0.13
CPSF4-206ENST00000441580 NEK4P51957 841 aa15.87■□□□□ 0.13
CPSF4-206ENST00000441580 LRRC24Q50LG9 513 aa15.87■□□□□ 0.13
CPSF4-206ENST00000441580 CLEC4GQ6UXB4 293 aa15.87■□□□□ 0.13
CPSF4-206ENST00000441580 KBTBD3Q8NAB2 608 aa15.87■□□□□ 0.13
CPSF4-206ENST00000441580 KCNB2Q92953 911 aa15.87■□□□□ 0.13
CPSF4-206ENST00000441580 ZNF594Q96JF6 807 aaPredicted RBP15.87■□□□□ 0.13
CPSF4-206ENST00000441580 DNAJC2Q99543 621 aaKnown RBP15.87■□□□□ 0.13
CPSF4-206ENST00000441580 AFF2P51816 1311 aa15.87■□□□□ 0.13
CPSF4-206ENST00000441580 KCNQ2O43526 872 aa15.86■□□□□ 0.13
CPSF4-206ENST00000441580 PTMSP20962 102 aa15.86■□□□□ 0.13
CPSF4-206ENST00000441580 RAB3GAP1Q15042 981 aa15.86■□□□□ 0.13
CPSF4-206ENST00000441580 RNF20Q5VTR2 975 aa15.86■□□□□ 0.13
CPSF4-206ENST00000441580 GJD4Q96KN9 370 aaPredicted RBP15.86■□□□□ 0.13
CPSF4-206ENST00000441580 NEUROD6Q96NK8 337 aa15.86■□□□□ 0.13
CPSF4-206ENST00000441580 GBP4Q96PP9 640 aa15.86■□□□□ 0.13
CPSF4-206ENST00000441580 HMG20BQ9P0W2 317 aa15.86■□□□□ 0.13
CPSF4-206ENST00000441580 TRPC5Q9UL62 973 aaPredicted RBP15.86■□□□□ 0.13
CPSF4-206ENST00000441580 C4AP0C0L4 1744 aa15.85■□□□□ 0.13
CPSF4-206ENST00000441580 C4BP0C0L5 1744 aa15.85■□□□□ 0.13
CPSF4-206ENST00000441580 CASZ1Q86V15 1759 aa15.85■□□□□ 0.13
CPSF4-206ENST00000441580 A0A0D9SFI3 127 aa15.85■□□□□ 0.13
CPSF4-206ENST00000441580 FRAT2O75474 233 aaPredicted RBP15.85■□□□□ 0.13
CPSF4-206ENST00000441580 ZKSCAN1P17029 563 aaPredicted RBP15.85■□□□□ 0.13
CPSF4-206ENST00000441580 METTL24Q5JXM2 366 aa15.85■□□□□ 0.13
CPSF4-206ENST00000441580 CCDC158Q5M9N0 1113 aa15.85■□□□□ 0.13
CPSF4-206ENST00000441580 RC3H1Q5TC82 1133 aaKnown RBP15.85■□□□□ 0.13
CPSF4-206ENST00000441580 AEBP2Q6ZN18 517 aaPredicted RBP15.85■□□□□ 0.13
CPSF4-206ENST00000441580 LINC00116Q8NCU8 138 aa15.85■□□□□ 0.13
CPSF4-206ENST00000441580 TM6SF1Q9BZW5 370 aa15.85■□□□□ 0.13
CPSF4-206ENST00000441580 GREM2Q9H772 168 aa15.85■□□□□ 0.13
CPSF4-206ENST00000441580 PAG1Q9NWQ8 432 aa15.85■□□□□ 0.13
CPSF4-206ENST00000441580 SNX14Q9Y5W7 946 aa15.85■□□□□ 0.13
CPSF4-206ENST00000441580 MYH7P12883 1935 aa15.85■□□□□ 0.13
CPSF4-206ENST00000441580 NTSR2O95665 410 aa15.84■□□□□ 0.13
CPSF4-206ENST00000441580 IFIT1P09914 478 aaKnown RBP15.84■□□□□ 0.13
CPSF4-206ENST00000441580 HSPA1LP34931 641 aa15.84■□□□□ 0.13
CPSF4-206ENST00000441580 NUCB2P80303 420 aa15.84■□□□□ 0.13
CPSF4-206ENST00000441580 ATP2B3Q16720 1220 aa15.84■□□□□ 0.13
CPSF4-206ENST00000441580 TTC39AQ5SRH9 613 aa15.84■□□□□ 0.13
CPSF4-206ENST00000441580 FAM227BQ96M60 508 aa15.84■□□□□ 0.13
CPSF4-206ENST00000441580 PUS3Q9BZE2 481 aaKnown RBP15.84■□□□□ 0.13
CPSF4-206ENST00000441580 CNNM1Q9NRU3 951 aa15.84■□□□□ 0.13
CPSF4-206ENST00000441580 MROH5Q6ZUA9 1318 aa15.84■□□□□ 0.13
CPSF4-206ENST00000441580 A0A1B0GUL6 1792 aa15.84■□□□□ 0.13
CPSF4-206ENST00000441580 RPAP1Q9BWH6 1393 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms