RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 IRX5P78411 483 aaPredicted RBP23.89■■□□□ 1.41
SHOX2-203ENST00000441443 NYAP1Q6ZVC0 841 aa23.89■■□□□ 1.41
SHOX2-203ENST00000441443 TAF6LQ9Y6J9 622 aa23.89■■□□□ 1.41
SHOX2-203ENST00000441443 CEBPZQ03701 1054 aaKnown RBP23.89■■□□□ 1.41
SHOX2-203ENST00000441443 DDX11Q96FC9 970 aa23.89■■□□□ 1.41
SHOX2-203ENST00000441443 CCDC66A2RUB6 948 aa23.88■■□□□ 1.41
SHOX2-203ENST00000441443 ZNF530Q6P9A1 599 aaPredicted RBP23.88■■□□□ 1.41
SHOX2-203ENST00000441443 CCDC69A6NI79 296 aa23.87■■□□□ 1.41
SHOX2-203ENST00000441443 TEFQ10587 303 aa23.87■■□□□ 1.41
SHOX2-203ENST00000441443 IQCB1Q15051 598 aa23.87■■□□□ 1.41
SHOX2-203ENST00000441443 RGPD1P0DJD0 1748 aa23.87■■□□□ 1.41
SHOX2-203ENST00000441443 IP6K1Q92551 441 aa23.87■■□□□ 1.41
SHOX2-203ENST00000441443 SYTL4Q96C24 671 aaPredicted RBP23.87■■□□□ 1.41
SHOX2-203ENST00000441443 CDK11BP21127 795 aaKnown RBP23.86■■□□□ 1.41
SHOX2-203ENST00000441443 MAPK8IP2Q13387 824 aaPredicted RBP23.86■■□□□ 1.41
SHOX2-203ENST00000441443 KCNB2Q92953 911 aa23.86■■□□□ 1.41
SHOX2-203ENST00000441443 CDC25BP30305 580 aa23.86■■□□□ 1.41
SHOX2-203ENST00000441443 ERO1AQ96HE7 468 aa23.86■■□□□ 1.41
SHOX2-203ENST00000441443 ZNF446Q9NWS9 450 aa23.86■■□□□ 1.41
SHOX2-203ENST00000441443 ANKARQ7Z5J8 1434 aa23.85■■□□□ 1.41
SHOX2-203ENST00000441443 ERBB3P21860 1342 aa23.85■■□□□ 1.41
SHOX2-203ENST00000441443 TTC41PQ6P2S7 1318 aa23.85■■□□□ 1.41
SHOX2-203ENST00000441443 SLC27A2O14975 620 aa23.85■■□□□ 1.41
SHOX2-203ENST00000441443 CLASRPQ8N2M8 674 aaKnown RBP23.85■■□□□ 1.41
SHOX2-203ENST00000441443 HTATSF1O43719 755 aaKnown RBP23.85■■□□□ 1.41
SHOX2-203ENST00000441443 JAK2O60674 1132 aa23.85■■□□□ 1.41
SHOX2-203ENST00000441443 BLOC1S2Q6QNY1 142 aa23.85■■□□□ 1.41
SHOX2-203ENST00000441443 FBXW7Q969H0 707 aa23.85■■□□□ 1.41
SHOX2-203ENST00000441443 CCZ1BP86790 482 aa23.84■■□□□ 1.41
SHOX2-203ENST00000441443 CCZ1P86791 482 aaPredicted RBP23.84■■□□□ 1.41
SHOX2-203ENST00000441443 TIGD1Q96MW7 591 aa23.84■■□□□ 1.41
SHOX2-203ENST00000441443 ECHDC1Q9NTX5 307 aa23.84■■□□□ 1.41
SHOX2-203ENST00000441443 FAM53CQ9NYF3 392 aa23.84■■□□□ 1.41
SHOX2-203ENST00000441443 FMN2Q9NZ56 1722 aa23.84■■□□□ 1.41
SHOX2-203ENST00000441443 SLU7O95391 586 aaKnown RBP23.84■■□□□ 1.41
SHOX2-203ENST00000441443 CCAR2Q8N163 923 aaKnown RBP23.84■■□□□ 1.41
SHOX2-203ENST00000441443 CHPF2Q9P2E5 772 aa23.84■■□□□ 1.41
SHOX2-203ENST00000441443 PA2G4Q9UQ80 394 aaKnown RBP23.84■■□□□ 1.41
SHOX2-203ENST00000441443 BECN2A8MW95 431 aa23.83■■□□□ 1.41
SHOX2-203ENST00000441443 ZC3H6P61129 1189 aaKnown RBP23.83■■□□□ 1.41
SHOX2-203ENST00000441443 NMIQ13287 307 aaPredicted RBP23.83■■□□□ 1.41
SHOX2-203ENST00000441443 MRFAP1L1Q96HT8 127 aa23.83■■□□□ 1.41
SHOX2-203ENST00000441443 TOB2Q14106 344 aaPredicted RBP23.83■■□□□ 1.4
SHOX2-203ENST00000441443 IFIT2P09913 472 aaKnown RBP23.82■■□□□ 1.4
SHOX2-203ENST00000441443 PSMA5P28066 241 aa23.82■■□□□ 1.4
SHOX2-203ENST00000441443 MAP4K1Q92918 833 aa23.82■■□□□ 1.4
SHOX2-203ENST00000441443 GTF3C6Q969F1 213 aa23.82■■□□□ 1.4
SHOX2-203ENST00000441443 TRERF1Q96PN7 1200 aa23.82■■□□□ 1.4
SHOX2-203ENST00000441443 GCP02774 474 aa23.82■■□□□ 1.4
SHOX2-203ENST00000441443 ERCC6LQ2NKX8 1250 aa23.82■■□□□ 1.4
SHOX2-203ENST00000441443 SARM1Q6SZW1 724 aa23.82■■□□□ 1.4
SHOX2-203ENST00000441443 LRRN4CLQ8ND94 238 aa23.82■■□□□ 1.4
SHOX2-203ENST00000441443 ERCC4Q92889 916 aaPredicted RBP23.82■■□□□ 1.4
SHOX2-203ENST00000441443 USP42Q9H9J4 1324 aaKnown RBP23.82■■□□□ 1.4
SHOX2-203ENST00000441443 FAM208AQ9UK61 1670 aaKnown RBP23.82■■□□□ 1.4
SHOX2-203ENST00000441443 NEMFO60524 1076 aa23.81■■□□□ 1.4
SHOX2-203ENST00000441443 HSP90AB4PQ58FF6 505 aa23.81■■□□□ 1.4
SHOX2-203ENST00000441443 PI4KAP2A4QPH2 592 aa23.81■■□□□ 1.4
SHOX2-203ENST00000441443 BTBD11A6QL63 1104 aa23.81■■□□□ 1.4
SHOX2-203ENST00000441443 FOSBP53539 338 aa23.81■■□□□ 1.4
SHOX2-203ENST00000441443 PROSER2Q86WR7 435 aaPredicted RBP23.81■■□□□ 1.4
SHOX2-203ENST00000441443 PI4KAP1Q8N8J0 262 aa23.81■■□□□ 1.4
SHOX2-203ENST00000441443 DDX17Q92841 729 aaKnown RBP23.8■■□□□ 1.4
SHOX2-203ENST00000441443 BRF1Q92994 677 aa23.8■■□□□ 1.4
SHOX2-203ENST00000441443 EVI5LQ96CN4 794 aa23.8■■□□□ 1.4
SHOX2-203ENST00000441443 FTOQ9C0B1 505 aaKnown RBP eCLIP23.8■■□□□ 1.4
SHOX2-203ENST00000441443 RPS6KB1P23443 525 aa23.8■■□□□ 1.4
SHOX2-203ENST00000441443 PDIA4P13667 645 aaKnown RBP23.79■■□□□ 1.4
SHOX2-203ENST00000441443 AACSQ86V21 672 aa23.79■■□□□ 1.4
SHOX2-203ENST00000441443 A0A0D9SFI3 127 aa23.78■■□□□ 1.4
SHOX2-203ENST00000441443 NOL10Q9BSC4 688 aaKnown RBP23.78■■□□□ 1.4
SHOX2-203ENST00000441443 H3BQV1 296 aa23.78■■□□□ 1.4
SHOX2-203ENST00000441443 RESTQ13127 1097 aa23.78■■□□□ 1.4
SHOX2-203ENST00000441443 ANKRD1Q15327 319 aa23.78■■□□□ 1.4
SHOX2-203ENST00000441443 STX1AQ16623 288 aa23.78■■□□□ 1.4
SHOX2-203ENST00000441443 C1orf141Q5JVX7 400 aa23.78■■□□□ 1.4
SHOX2-203ENST00000441443 IFFO2Q5TF58 517 aa23.78■■□□□ 1.4
SHOX2-203ENST00000441443 KCNH5Q8NCM2 988 aa23.78■■□□□ 1.4
SHOX2-203ENST00000441443 CAVIN2O95810 425 aa23.78■■□□□ 1.4
SHOX2-203ENST00000441443 BEND3Q5T5X7 828 aa23.78■■□□□ 1.4
SHOX2-203ENST00000441443 PXDNLA1KZ92 1463 aa23.77■■□□□ 1.4
SHOX2-203ENST00000441443 DHX40Q8IX18 779 aaKnown RBP23.77■■□□□ 1.4
SHOX2-203ENST00000441443 GPATCH3Q96I76 525 aa23.77■■□□□ 1.4
SHOX2-203ENST00000441443 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.77■■□□□ 1.4
SHOX2-203ENST00000441443 ADCY9O60503 1353 aa23.77■■□□□ 1.4
SHOX2-203ENST00000441443 EIF4A1P60842 406 aaKnown RBP23.77■■□□□ 1.4
SHOX2-203ENST00000441443 SLFNL1Q499Z3 407 aa23.77■■□□□ 1.4
SHOX2-203ENST00000441443 CCAR1Q8IX12 1150 aaKnown RBP23.77■■□□□ 1.4
SHOX2-203ENST00000441443 ANKRD24Q8TF21 1146 aa23.77■■□□□ 1.4
SHOX2-203ENST00000441443 NAP1L2Q9ULW6 460 aaPredicted RBP23.77■■□□□ 1.4
SHOX2-203ENST00000441443 DNAAF4Q8WXU2 420 aa23.76■■□□□ 1.39
SHOX2-203ENST00000441443 GOLPH3LQ9H4A5 285 aa23.76■■□□□ 1.39
SHOX2-203ENST00000441443 PRAMEF22A3QJZ6 481 aa23.76■■□□□ 1.39
SHOX2-203ENST00000441443 SNW1Q13573 536 aaKnown RBP23.76■■□□□ 1.39
SHOX2-203ENST00000441443 CCDC8Q9H0W5 538 aaPredicted RBP23.76■■□□□ 1.39
SHOX2-203ENST00000441443 CALCOCO1Q9P1Z2 691 aa23.76■■□□□ 1.39
SHOX2-203ENST00000441443 AXIN2Q9Y2T1 843 aa23.76■■□□□ 1.39
SHOX2-203ENST00000441443 PLEKHO1Q53GL0 409 aaPredicted RBP23.76■■□□□ 1.39
SHOX2-203ENST00000441443 SYT10Q6XYQ8 523 aa23.76■■□□□ 1.39
SHOX2-203ENST00000441443 AOPEPQ8N6M6 819 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms