RNA–Protein interactions for RNA: ENST00000440318.5

FAM3A-213, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-213ENST00000440318 CNOT7Q9UIV1 285 aaKnown RBP17.58■□□□□ 0.4
FAM3A-213ENST00000440318 YDJCA8MPS7 323 aa17.57■□□□□ 0.4
FAM3A-213ENST00000440318 PRPF38BQ5VTL8 546 aaKnown RBP17.57■□□□□ 0.4
FAM3A-213ENST00000440318 RGMBQ6NW40 437 aa17.57■□□□□ 0.4
FAM3A-213ENST00000440318 DPP8Q6V1X1 898 aaPredicted RBP17.57■□□□□ 0.4
FAM3A-213ENST00000440318 MICALL2Q8IY33 904 aa17.57■□□□□ 0.4
FAM3A-213ENST00000440318 TMX4Q9H1E5 349 aaPredicted RBP17.57■□□□□ 0.4
FAM3A-213ENST00000440318 SAGE1Q9NXZ1 904 aa17.57■□□□□ 0.4
FAM3A-213ENST00000440318 DUOX1Q9NRD9 1551 aa17.57■□□□□ 0.4
FAM3A-213ENST00000440318 LAMB2P55268 1798 aa17.56■□□□□ 0.4
FAM3A-213ENST00000440318 HTATSF1O43719 755 aaKnown RBP17.56■□□□□ 0.4
FAM3A-213ENST00000440318 U2AF1L5P0DN76 240 aaPredicted RBP17.56■□□□□ 0.4
FAM3A-213ENST00000440318 PPP2R1AP30153 589 aa17.56■□□□□ 0.4
FAM3A-213ENST00000440318 U2AF1Q01081 240 aaKnown RBP eCLIP17.56■□□□□ 0.4
FAM3A-213ENST00000440318 KIF23Q02241 960 aaPredicted RBP17.56■□□□□ 0.4
FAM3A-213ENST00000440318 TNIP1Q15025 636 aa17.56■□□□□ 0.4
FAM3A-213ENST00000440318 GIGYF2Q6Y7W6 1299 aaKnown RBP17.56■□□□□ 0.4
FAM3A-213ENST00000440318 NLRP3Q96P20 1036 aa17.56■□□□□ 0.4
FAM3A-213ENST00000440318 PRKRIP1Q9H875 184 aaPredicted RBP17.56■□□□□ 0.4
FAM3A-213ENST00000440318 ANP32CO43423 234 aa17.55■□□□□ 0.4
FAM3A-213ENST00000440318 TRPA1O75762 1119 aa17.55■□□□□ 0.4
FAM3A-213ENST00000440318 EGFRP00533 1210 aa17.55■□□□□ 0.4
FAM3A-213ENST00000440318 RALBP1Q15311 655 aa17.55■□□□□ 0.4
FAM3A-213ENST00000440318 CFAP53Q96M91 514 aa17.55■□□□□ 0.4
FAM3A-213ENST00000440318 RNF186Q9NXI6 227 aa17.55■□□□□ 0.4
FAM3A-213ENST00000440318 ZBTB12Q9Y330 459 aaPredicted RBP17.55■□□□□ 0.4
FAM3A-213ENST00000440318 MYBBP1AQ9BQG0 1328 aaKnown RBP17.54■□□□□ 0.4
FAM3A-213ENST00000440318 EIF4A1P60842 406 aaKnown RBP17.54■□□□□ 0.4
FAM3A-213ENST00000440318 SLC10A5Q5PT55 438 aa17.54■□□□□ 0.4
FAM3A-213ENST00000440318 DIEXFQ68CQ4 756 aaKnown RBP17.54■□□□□ 0.4
FAM3A-213ENST00000440318 SAMD7Q7Z3H4 446 aa17.54■□□□□ 0.4
FAM3A-213ENST00000440318 PPP1R42Q7Z4L9 355 aa17.54■□□□□ 0.4
FAM3A-213ENST00000440318 SP8Q8IXZ3 490 aa17.54■□□□□ 0.4
FAM3A-213ENST00000440318 MPNDQ8N594 471 aa17.54■□□□□ 0.4
FAM3A-213ENST00000440318 ADM5C9JUS6 153 aa17.53■□□□□ 0.4
FAM3A-213ENST00000440318 H7C1D1 291 aa17.53■□□□□ 0.4
FAM3A-213ENST00000440318 KRT26Q7Z3Y9 468 aa17.53■□□□□ 0.4
FAM3A-213ENST00000440318 GBA2Q9HCG7 927 aaPredicted RBP17.53■□□□□ 0.4
FAM3A-213ENST00000440318 TAF1P21675 1872 aa17.52■□□□□ 0.4
FAM3A-213ENST00000440318 BBOX1O75936 387 aa17.52■□□□□ 0.4
FAM3A-213ENST00000440318 ZNF157P51786 506 aaPredicted RBP17.52■□□□□ 0.4
FAM3A-213ENST00000440318 TBC1D10BQ4KMP7 808 aaPredicted RBP17.52■□□□□ 0.4
FAM3A-213ENST00000440318 PARP10Q53GL7 1025 aa17.52■□□□□ 0.4
FAM3A-213ENST00000440318 CCDC102AQ96A19 550 aa17.52■□□□□ 0.4
FAM3A-213ENST00000440318 UTP14AQ9BVJ6 771 aaKnown RBP17.52■□□□□ 0.4
FAM3A-213ENST00000440318 NUDCQ9Y266 331 aa17.52■□□□□ 0.4
FAM3A-213ENST00000440318 ANKRD36CQ5JPF3 1778 aa17.52■□□□□ 0.4
FAM3A-213ENST00000440318 POLR2AP24928 1970 aaKnown RBP17.51■□□□□ 0.39
FAM3A-213ENST00000440318 AKAP11Q9UKA4 1901 aa17.51■□□□□ 0.39
FAM3A-213ENST00000440318 LRP10Q7Z4F1 713 aa17.51■□□□□ 0.39
FAM3A-213ENST00000440318 CTU1Q7Z7A3 348 aaKnown RBP17.51■□□□□ 0.39
FAM3A-213ENST00000440318 CSRNP1Q96S65 589 aa17.51■□□□□ 0.39
FAM3A-213ENST00000440318 DLG5Q8TDM6 1919 aa17.51■□□□□ 0.39
FAM3A-213ENST00000440318 LRRC37AA6NMS7 1700 aa17.5■□□□□ 0.39
FAM3A-213ENST00000440318 PSMD14O00487 310 aa17.5■□□□□ 0.39
FAM3A-213ENST00000440318 SLC10A3P09131 477 aa17.5■□□□□ 0.39
FAM3A-213ENST00000440318 HCLS1P14317 486 aaPredicted RBP17.5■□□□□ 0.39
FAM3A-213ENST00000440318 C2orf69Q8N8R5 385 aa17.5■□□□□ 0.39
FAM3A-213ENST00000440318 THUMPD2Q9BTF0 503 aaKnown RBP17.5■□□□□ 0.39
FAM3A-213ENST00000440318 PNISRQ8TF01 805 aaKnown RBP17.49■□□□□ 0.39
FAM3A-213ENST00000440318 DPF2Q92785 391 aa17.49■□□□□ 0.39
FAM3A-213ENST00000440318 HPS5Q9UPZ3 1129 aa17.49■□□□□ 0.39
FAM3A-213ENST00000440318 GRAPQ13588 217 aa17.48■□□□□ 0.39
FAM3A-213ENST00000440318 RBM26Q5T8P6 1007 aaKnown RBP17.48■□□□□ 0.39
FAM3A-213ENST00000440318 GRAPLQ8TC17 118 aaPredicted RBP17.48■□□□□ 0.39
FAM3A-213ENST00000440318 DBNDD1Q9H9R9 158 aa17.48■□□□□ 0.39
FAM3A-213ENST00000440318 ERBB4Q15303 1308 aa17.47■□□□□ 0.39
FAM3A-213ENST00000440318 PDIA6Q15084 440 aa17.47■□□□□ 0.39
FAM3A-213ENST00000440318 PROSER3Q2NL68 480 aa17.47■□□□□ 0.39
FAM3A-213ENST00000440318 DCPSQ96C86 337 aaKnown RBP17.47■□□□□ 0.39
FAM3A-213ENST00000440318 KCNQ5Q9NR82 932 aa17.47■□□□□ 0.39
FAM3A-213ENST00000440318 ASTN2O75129 1339 aaPredicted RBP17.47■□□□□ 0.39
FAM3A-213ENST00000440318 COL4A1P02462 1669 aa17.46■□□□□ 0.39
FAM3A-213ENST00000440318 RTL9Q8NET4 1388 aa17.46■□□□□ 0.39
FAM3A-213ENST00000440318 ANXA1P04083 346 aa17.46■□□□□ 0.39
FAM3A-213ENST00000440318 DDX46Q7L014 1031 aaKnown RBP17.46■□□□□ 0.39
FAM3A-213ENST00000440318 WASHC4Q2M389 1173 aa17.45■□□□□ 0.38
FAM3A-213ENST00000440318 NLRP10Q86W26 655 aa17.45■□□□□ 0.38
FAM3A-213ENST00000440318 RASAL3Q86YV0 1011 aa17.45■□□□□ 0.38
FAM3A-213ENST00000440318 CDCA5Q96FF9 252 aa17.45■□□□□ 0.38
FAM3A-213ENST00000440318 GGA3Q9NZ52 723 aa17.45■□□□□ 0.38
FAM3A-213ENST00000440318 RIMBP2O15034 1052 aa17.44■□□□□ 0.38
FAM3A-213ENST00000440318 KIF4BQ2VIQ3 1234 aa17.44■□□□□ 0.38
FAM3A-213ENST00000440318 ZNF428Q96B54 188 aa17.44■□□□□ 0.38
FAM3A-213ENST00000440318 RPS12P25398 132 aaKnown RBP17.43■□□□□ 0.38
FAM3A-213ENST00000440318 POLLQ9UGP5 575 aa17.43■□□□□ 0.38
FAM3A-213ENST00000440318 SH3TC1Q8TE82 1336 aa17.43■□□□□ 0.38
FAM3A-213ENST00000440318 SCN9AQ15858 1988 aa17.42■□□□□ 0.38
FAM3A-213ENST00000440318 DDX60Q8IY21 1712 aaKnown RBP17.42■□□□□ 0.38
FAM3A-213ENST00000440318 ECE2O60344 883 aa17.42■□□□□ 0.38
FAM3A-213ENST00000440318 EIF2S2P20042 333 aaKnown RBP17.42■□□□□ 0.38
FAM3A-213ENST00000440318 DOK7Q18PE1 504 aa17.42■□□□□ 0.38
FAM3A-213ENST00000440318 SULF1Q8IWU6 871 aa17.42■□□□□ 0.38
FAM3A-213ENST00000440318 TRMT112Q9UI30 125 aaKnown RBP17.42■□□□□ 0.38
FAM3A-213ENST00000440318 NSFL1CQ9UNZ2 370 aaKnown RBP17.42■□□□□ 0.38
FAM3A-213ENST00000440318 GPSM2P81274 684 aa17.41■□□□□ 0.38
FAM3A-213ENST00000440318 CCDC184Q52MB2 194 aa17.41■□□□□ 0.38
FAM3A-213ENST00000440318 TMC4Q7Z404 712 aa17.41■□□□□ 0.38
FAM3A-213ENST00000440318 ZNF296Q8WUU4 475 aaPredicted RBP17.41■□□□□ 0.38
FAM3A-213ENST00000440318 CELF1Q92879 486 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms