RNA–Protein interactions for RNA: ENST00000440126.7

APP-209, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 2,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-209ENST00000440126 SMIM5Q71RC9 77 aa9.5□□□□□ -0.89
APP-209ENST00000440126 ERC1Q8IUD2 1116 aa9.5□□□□□ -0.89
APP-209ENST00000440126 NECAB1Q8N987 351 aa9.5□□□□□ -0.89
APP-209ENST00000440126 CIZ1Q9ULV3 898 aaPredicted RBP9.5□□□□□ -0.89
APP-209ENST00000440126 NSFL1CQ9UNZ2 370 aaKnown RBP9.5□□□□□ -0.89
APP-209ENST00000440126 TBC1D2BQ9UPU7 963 aa9.5□□□□□ -0.89
APP-209ENST00000440126 FPGT-TNNI3KV9GXZ4 949 aa9.5□□□□□ -0.89
APP-209ENST00000440126 GOLGA6L3A6NEY3 463 aa9.5□□□□□ -0.89
APP-209ENST00000440126 FOXO4P98177 505 aa9.5□□□□□ -0.89
APP-209ENST00000440126 HLFQ16534 295 aa9.5□□□□□ -0.89
APP-209ENST00000440126 SLC4A9Q96Q91 983 aa9.5□□□□□ -0.89
APP-209ENST00000440126 ATG3Q9NT62 314 aa9.5□□□□□ -0.89
APP-209ENST00000440126 CWC25Q9NXE8 425 aaPredicted RBP9.5□□□□□ -0.89
APP-209ENST00000440126 AOX1Q06278 1338 aa9.5□□□□□ -0.89
APP-209ENST00000440126 TTC41PQ6P2S7 1318 aa9.5□□□□□ -0.89
APP-209ENST00000440126 CHRM1P11229 460 aaPredicted RBP9.5□□□□□ -0.89
APP-209ENST00000440126 CASP7P55210 303 aa9.5□□□□□ -0.89
APP-209ENST00000440126 CAVIN1Q6NZI2 390 aaKnown RBP9.5□□□□□ -0.89
APP-209ENST00000440126 ANP32BQ92688 251 aaKnown RBP9.5□□□□□ -0.89
APP-209ENST00000440126 MAP7D2Q96T17 732 aa9.5□□□□□ -0.89
APP-209ENST00000440126 RBM8AQ9Y5S9 174 aaKnown RBP9.5□□□□□ -0.89
APP-209ENST00000440126 PKD1L3Q7Z443 1732 aa9.49□□□□□ -0.89
APP-209ENST00000440126 ARFGEF2Q9Y6D5 1785 aa9.49□□□□□ -0.89
APP-209ENST00000440126 A0A0G2JLW4 131 aa9.49□□□□□ -0.89
APP-209ENST00000440126 PRIM1P49642 420 aaKnown RBP9.49□□□□□ -0.89
APP-209ENST00000440126 TMED8Q6PL24 325 aaPredicted RBP9.49□□□□□ -0.89
APP-209ENST00000440126 RUFY3Q7L099 469 aa9.49□□□□□ -0.89
APP-209ENST00000440126 ERVV-2B6SEH9 535 aa9.49□□□□□ -0.89
APP-209ENST00000440126 GOLIM4O00461 696 aa9.49□□□□□ -0.89
APP-209ENST00000440126 STK3Q13188 491 aa9.49□□□□□ -0.89
APP-209ENST00000440126 CCDC83Q8IWF9 413 aa9.49□□□□□ -0.89
APP-209ENST00000440126 EVI5LQ96CN4 794 aa9.49□□□□□ -0.89
APP-209ENST00000440126 LRRC2Q9BYS8 371 aa9.49□□□□□ -0.89
APP-209ENST00000440126 GLI3P10071 1580 aa9.48□□□□□ -0.89
APP-209ENST00000440126 PI16Q6UXB8 463 aa9.48□□□□□ -0.89
APP-209ENST00000440126 ZBTB1Q9Y2K1 713 aa9.48□□□□□ -0.89
APP-209ENST00000440126 MRC1P22897 1456 aa9.48□□□□□ -0.89
APP-209ENST00000440126 ADORA1P30542 326 aa9.48□□□□□ -0.89
APP-209ENST00000440126 COPRSQ9NQ92 184 aa9.48□□□□□ -0.89
APP-209ENST00000440126 TAOK2Q9UL54 1235 aa9.48□□□□□ -0.89
APP-209ENST00000440126 CCDC171Q6TFL3 1326 aa9.48□□□□□ -0.89
APP-209ENST00000440126 H7C1W4 665 aa9.47□□□□□ -0.89
APP-209ENST00000440126 CYP2E1P05181 493 aaPredicted RBP9.47□□□□□ -0.89
APP-209ENST00000440126 ATG9AQ7Z3C6 839 aa9.47□□□□□ -0.89
APP-209ENST00000440126 USP42Q9H9J4 1324 aaKnown RBP9.47□□□□□ -0.89
APP-209ENST00000440126 KCPQ6ZWJ8 1503 aa9.47□□□□□ -0.89
APP-209ENST00000440126 COL15A1P39059 1388 aa9.47□□□□□ -0.89
APP-209ENST00000440126 SNAP23O00161 211 aa9.47□□□□□ -0.89
APP-209ENST00000440126 FOSBP53539 338 aa9.47□□□□□ -0.89
APP-209ENST00000440126 NUCB2P80303 420 aa9.47□□□□□ -0.89
APP-209ENST00000440126 DMTNQ08495 405 aa9.47□□□□□ -0.89
APP-209ENST00000440126 CREB3L3Q68CJ9 461 aa9.47□□□□□ -0.89
APP-209ENST00000440126 RNF216Q9NWF9 866 aaPredicted RBP9.47□□□□□ -0.89
APP-209ENST00000440126 HDAC5Q9UQL6 1122 aa9.47□□□□□ -0.89
APP-209ENST00000440126 TOGARAM1Q9Y4F4 1720 aa9.47□□□□□ -0.89
APP-209ENST00000440126 GOLGA6L22H0YM25 854 aa9.46□□□□□ -0.89
APP-209ENST00000440126 FKBP4Q02790 459 aaKnown RBP eCLIP9.46□□□□□ -0.89
APP-209ENST00000440126 RABL6Q3YEC7 729 aaPredicted RBP9.46□□□□□ -0.89
APP-209ENST00000440126 PPP4R3BQ5MIZ7 849 aa9.46□□□□□ -0.89
APP-209ENST00000440126 FAM182BQ5T319 152 aa9.46□□□□□ -0.89
APP-209ENST00000440126 VPS53Q5VIR6 699 aa9.46□□□□□ -0.89
APP-209ENST00000440126 CNKSR2Q8WXI2 1034 aa9.46□□□□□ -0.89
APP-209ENST00000440126 LMBRD1Q9NUN5 540 aa9.46□□□□□ -0.89
APP-209ENST00000440126 TCHHQ07283 1943 aa9.46□□□□□ -0.89
APP-209ENST00000440126 ABCA3Q99758 1704 aa9.46□□□□□ -0.89
APP-209ENST00000440126 SHANK3Q9BYB0 1731 aa9.46□□□□□ -0.89
APP-209ENST00000440126 NKX1-1Q15270 411 aaPredicted RBP9.46□□□□□ -0.9
APP-209ENST00000440126 HELBQ8NG08 1087 aaPredicted RBP9.46□□□□□ -0.9
APP-209ENST00000440126 GPT2Q8TD30 523 aa9.46□□□□□ -0.9
APP-209ENST00000440126 RUFY2Q8WXA3 655 aa9.46□□□□□ -0.9
APP-209ENST00000440126 PDRG1Q9NUG6 133 aa9.46□□□□□ -0.9
APP-209ENST00000440126 PARP4Q9UKK3 1724 aaKnown RBP9.46□□□□□ -0.9
APP-209ENST00000440126 SLC27A2O14975 620 aa9.46□□□□□ -0.9
APP-209ENST00000440126 ANAPC15P60006 121 aa9.46□□□□□ -0.9
APP-209ENST00000440126 CHMP4CQ96CF2 233 aa9.46□□□□□ -0.9
APP-209ENST00000440126 TTC14Q96N46 770 aa9.46□□□□□ -0.9
APP-209ENST00000440126 A0A1B0GUL7 405 aa9.45□□□□□ -0.9
APP-209ENST00000440126 ESPNB1AK53 854 aa9.45□□□□□ -0.9
APP-209ENST00000440126 EXOC5O00471 708 aa9.45□□□□□ -0.9
APP-209ENST00000440126 GADD45BO75293 160 aaPredicted RBP9.45□□□□□ -0.9
APP-209ENST00000440126 FAM173BQ6P4H8 233 aa9.45□□□□□ -0.9
APP-209ENST00000440126 KIF6Q6ZMV9 814 aa9.45□□□□□ -0.9
APP-209ENST00000440126 CHST3Q7LGC8 479 aa9.45□□□□□ -0.9
APP-209ENST00000440126 FERMT3Q86UX7 667 aa9.45□□□□□ -0.9
APP-209ENST00000440126 ST3GAL1Q11201 340 aa9.45□□□□□ -0.9
APP-209ENST00000440126 TCIRG1Q13488 830 aa9.45□□□□□ -0.9
APP-209ENST00000440126 SCARF1Q14162 830 aa9.45□□□□□ -0.9
APP-209ENST00000440126 NECTIN1Q15223 517 aa9.45□□□□□ -0.9
APP-209ENST00000440126 ZBTB9Q96C00 473 aa9.45□□□□□ -0.9
APP-209ENST00000440126 GRPEL1Q9HAV7 217 aa9.45□□□□□ -0.9
APP-209ENST00000440126 GOLGB1Q14789 3259 aaKnown RBP9.44□□□□□ -0.9
APP-209ENST00000440126 PATL2C9JE40 543 aaKnown RBP9.44□□□□□ -0.9
APP-209ENST00000440126 KCNQ2O43526 872 aa9.44□□□□□ -0.9
APP-209ENST00000440126 CUL4AQ13619 759 aa9.44□□□□□ -0.9
APP-209ENST00000440126 ME3Q16798 604 aa9.44□□□□□ -0.9
APP-209ENST00000440126 GREM2Q9H772 168 aa9.44□□□□□ -0.9
APP-209ENST00000440126 CWC22Q9HCG8 908 aaKnown RBP9.44□□□□□ -0.9
APP-209ENST00000440126 TPCN1Q9ULQ1 816 aa9.44□□□□□ -0.9
APP-209ENST00000440126 ZNF609O15014 1411 aa9.44□□□□□ -0.9
APP-209ENST00000440126 FSD2A1L4K1 749 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms