RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 DNAJC10Q8IXB1 793 aa12.5□□□□□ -0.41
CPNE1-218ENST00000439806 NEUROD6Q96NK8 337 aa12.5□□□□□ -0.41
CPNE1-218ENST00000439806 HAUS7Q99871 368 aa12.5□□□□□ -0.41
CPNE1-218ENST00000439806 ISCA1Q9BUE6 129 aa12.5□□□□□ -0.41
CPNE1-218ENST00000439806 GPR108Q9NPR9 543 aa12.5□□□□□ -0.41
CPNE1-218ENST00000439806 RTN4Q9NQC3 1192 aaKnown RBP12.5□□□□□ -0.41
CPNE1-218ENST00000439806 HMG20BQ9P0W2 317 aa12.5□□□□□ -0.41
CPNE1-218ENST00000439806 DISP2A7MBM2 1401 aa12.5□□□□□ -0.41
CPNE1-218ENST00000439806 ZNF609O15014 1411 aa12.5□□□□□ -0.41
CPNE1-218ENST00000439806 DOT1LQ8TEK3 1739 aa12.5□□□□□ -0.41
CPNE1-218ENST00000439806 TCHHQ07283 1943 aa12.49□□□□□ -0.41
CPNE1-218ENST00000439806 RPAP1Q9BWH6 1393 aaPredicted RBP12.49□□□□□ -0.41
CPNE1-218ENST00000439806 JCADQ9P266 1359 aa12.49□□□□□ -0.41
CPNE1-218ENST00000439806 EYA2O00167 538 aa12.49□□□□□ -0.41
CPNE1-218ENST00000439806 STARD3NLO95772 234 aa12.49□□□□□ -0.41
CPNE1-218ENST00000439806 CPA1P15085 419 aa12.49□□□□□ -0.41
CPNE1-218ENST00000439806 ADCK5Q3MIX3 580 aa12.49□□□□□ -0.41
CPNE1-218ENST00000439806 CAVIN1Q6NZI2 390 aaKnown RBP12.49□□□□□ -0.41
CPNE1-218ENST00000439806 BLOC1S2Q6QNY1 142 aa12.49□□□□□ -0.41
CPNE1-218ENST00000439806 PIGBQ92521 554 aa12.49□□□□□ -0.41
CPNE1-218ENST00000439806 EDC3Q96F86 508 aaKnown RBP12.49□□□□□ -0.41
CPNE1-218ENST00000439806 NUP98P52948 1817 aa12.48□□□□□ -0.41
CPNE1-218ENST00000439806 LAMA4Q16363 1823 aa12.48□□□□□ -0.41
CPNE1-218ENST00000439806 PALLDQ8WX93 1383 aa12.48□□□□□ -0.41
CPNE1-218ENST00000439806 CIAO1O76071 339 aa12.48□□□□□ -0.41
CPNE1-218ENST00000439806 ATG9AQ7Z3C6 839 aa12.48□□□□□ -0.41
CPNE1-218ENST00000439806 CCDC83Q8IWF9 413 aa12.48□□□□□ -0.41
CPNE1-218ENST00000439806 LARP6Q9BRS8 491 aaKnown RBP12.48□□□□□ -0.41
CPNE1-218ENST00000439806 PANK2Q9BZ23 570 aa12.48□□□□□ -0.41
CPNE1-218ENST00000439806 ATG3Q9NT62 314 aa12.48□□□□□ -0.41
CPNE1-218ENST00000439806 ASAP1Q9ULH1 1129 aa12.48□□□□□ -0.41
CPNE1-218ENST00000439806 CCDC9Q9Y3X0 531 aaKnown RBP12.48□□□□□ -0.41
CPNE1-218ENST00000439806 U3KPZ7 1027 aaPredicted RBP12.48□□□□□ -0.41
CPNE1-218ENST00000439806 MYH7P12883 1935 aa12.47□□□□□ -0.41
CPNE1-218ENST00000439806 MAP3K15Q6ZN16 1313 aa12.47□□□□□ -0.41
CPNE1-218ENST00000439806 PCCAP05165 728 aaPredicted RBP12.47□□□□□ -0.41
CPNE1-218ENST00000439806 ZNF445P59923 1031 aa12.47□□□□□ -0.41
CPNE1-218ENST00000439806 KRT32Q14532 448 aa12.47□□□□□ -0.41
CPNE1-218ENST00000439806 ANKRD1Q15327 319 aa12.47□□□□□ -0.41
CPNE1-218ENST00000439806 CCDC57Q2TAC2 916 aa12.47□□□□□ -0.41
CPNE1-218ENST00000439806 HSP90AB3PQ58FF7 597 aa12.47□□□□□ -0.41
CPNE1-218ENST00000439806 TAF7LQ5H9L4 462 aa12.47□□□□□ -0.41
CPNE1-218ENST00000439806 ZNF589Q86UQ0 364 aaPredicted RBP12.47□□□□□ -0.41
CPNE1-218ENST00000439806 GAS2L3Q86XJ1 694 aa12.47□□□□□ -0.41
CPNE1-218ENST00000439806 FAM43AQ8N2R8 423 aa12.47□□□□□ -0.41
CPNE1-218ENST00000439806 KBTBD3Q8NAB2 608 aa12.47□□□□□ -0.41
CPNE1-218ENST00000439806 ZNF594Q96JF6 807 aaPredicted RBP12.47□□□□□ -0.41
CPNE1-218ENST00000439806 PHLPP1O60346 1717 aa12.47□□□□□ -0.41
CPNE1-218ENST00000439806 NRAPQ86VF7 1730 aa12.46□□□□□ -0.41
CPNE1-218ENST00000439806 SH3TC1Q8TE82 1336 aa12.46□□□□□ -0.41
CPNE1-218ENST00000439806 EXOC5O00471 708 aa12.46□□□□□ -0.41
CPNE1-218ENST00000439806 TAF5LO75529 589 aa12.46□□□□□ -0.41
CPNE1-218ENST00000439806 LARGE1O95461 756 aa12.46□□□□□ -0.41
CPNE1-218ENST00000439806 ZSCAN22P10073 491 aaPredicted RBP12.46□□□□□ -0.41
CPNE1-218ENST00000439806 TRIM28Q13263 835 aaKnown RBP12.46□□□□□ -0.41
CPNE1-218ENST00000439806 ZSCAN23Q3MJ62 389 aa12.46□□□□□ -0.41
CPNE1-218ENST00000439806 MCMDC2Q4G0Z9 681 aa12.46□□□□□ -0.41
CPNE1-218ENST00000439806 LRRC24Q50LG9 513 aa12.46□□□□□ -0.41
CPNE1-218ENST00000439806 DDX46Q7L014 1031 aaKnown RBP12.46□□□□□ -0.41
CPNE1-218ENST00000439806 ANP32BQ92688 251 aaKnown RBP12.46□□□□□ -0.41
CPNE1-218ENST00000439806 SYAP1Q96A49 352 aaPredicted RBP12.46□□□□□ -0.41
CPNE1-218ENST00000439806 PAG1Q9NWQ8 432 aa12.46□□□□□ -0.41
CPNE1-218ENST00000439806 CEP126Q9P2H0 1117 aa12.46□□□□□ -0.41
CPNE1-218ENST00000439806 FBXO3Q9UK99 471 aa12.46□□□□□ -0.41
CPNE1-218ENST00000439806 BCL9O00512 1426 aa12.45□□□□□ -0.42
CPNE1-218ENST00000439806 STX6O43752 255 aa12.45□□□□□ -0.42
CPNE1-218ENST00000439806 IFIT1P09914 478 aaKnown RBP12.45□□□□□ -0.42
CPNE1-218ENST00000439806 RPS6KB1P23443 525 aa12.45□□□□□ -0.42
CPNE1-218ENST00000439806 GJB2P29033 226 aa12.45□□□□□ -0.42
CPNE1-218ENST00000439806 TICAM2Q86XR7 235 aa12.45□□□□□ -0.42
CPNE1-218ENST00000439806 GPT2Q8TD30 523 aa12.45□□□□□ -0.42
CPNE1-218ENST00000439806 CHAMP1Q96JM3 812 aa12.45□□□□□ -0.42
CPNE1-218ENST00000439806 PLA2G12BQ9BX93 195 aa12.45□□□□□ -0.42
CPNE1-218ENST00000439806 RBM27Q9P2N5 1060 aaKnown RBP12.45□□□□□ -0.42
CPNE1-218ENST00000439806 AKAP2Q9Y2D5 859 aa12.45□□□□□ -0.42
CPNE1-218ENST00000439806 ATP6V1DQ9Y5K8 247 aa12.45□□□□□ -0.42
CPNE1-218ENST00000439806 NDUFB9Q9Y6M9 179 aa12.45□□□□□ -0.42
CPNE1-218ENST00000439806 CDHR2Q9BYE9 1310 aa12.44□□□□□ -0.42
CPNE1-218ENST00000439806 A0A1B0GUL7 405 aa12.44□□□□□ -0.42
CPNE1-218ENST00000439806 GOLIM4O00461 696 aa12.44□□□□□ -0.42
CPNE1-218ENST00000439806 F13A1P00488 732 aa12.44□□□□□ -0.42
CPNE1-218ENST00000439806 LRRFIP1Q32MZ4 808 aaKnown RBP12.44□□□□□ -0.42
CPNE1-218ENST00000439806 TSGA10IPQ3SY00 556 aa12.44□□□□□ -0.42
CPNE1-218ENST00000439806 CCDC158Q5M9N0 1113 aa12.44□□□□□ -0.42
CPNE1-218ENST00000439806 TTC39AQ5SRH9 613 aa12.44□□□□□ -0.42
CPNE1-218ENST00000439806 GORABQ5T7V8 394 aa12.44□□□□□ -0.42
CPNE1-218ENST00000439806 USPL1Q5W0Q7 1092 aa12.44□□□□□ -0.42
CPNE1-218ENST00000439806 GIGYF2Q6Y7W6 1299 aaKnown RBP12.44□□□□□ -0.42
CPNE1-218ENST00000439806 CCDC129Q6ZRS4 1044 aa12.44□□□□□ -0.42
CPNE1-218ENST00000439806 ZBTB38Q8NAP3 1195 aaPredicted RBP12.44□□□□□ -0.42
CPNE1-218ENST00000439806 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.44□□□□□ -0.42
CPNE1-218ENST00000439806 SYTL4Q96C24 671 aaPredicted RBP12.44□□□□□ -0.42
CPNE1-218ENST00000439806 ALDH8A1Q9H2A2 487 aaPredicted RBP12.44□□□□□ -0.42
CPNE1-218ENST00000439806 HELLSQ9NRZ9 838 aa12.44□□□□□ -0.42
CPNE1-218ENST00000439806 SYT1P21579 422 aa12.43□□□□□ -0.42
CPNE1-218ENST00000439806 NASPP49321 788 aaPredicted RBP12.43□□□□□ -0.42
CPNE1-218ENST00000439806 TIMM10P62072 90 aa12.43□□□□□ -0.42
CPNE1-218ENST00000439806 IFIT5Q13325 482 aaKnown RBP12.43□□□□□ -0.42
CPNE1-218ENST00000439806 ME3Q16798 604 aa12.43□□□□□ -0.42
CPNE1-218ENST00000439806 CSPP1Q1MSJ5 1256 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms