RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 FEZ1Q99689 392 aa16.05■□□□□ 0.16
PCNX3-202ENST00000439247 TRMT1Q9NXH9 659 aaKnown RBP16.05■□□□□ 0.16
PCNX3-202ENST00000439247 RBM8AQ9Y5S9 174 aaKnown RBP16.05■□□□□ 0.16
PCNX3-202ENST00000439247 TAF7Q15545 349 aaPredicted RBP16.04■□□□□ 0.16
PCNX3-202ENST00000439247 SYTL4Q96C24 671 aaPredicted RBP16.04■□□□□ 0.16
PCNX3-202ENST00000439247 IGSF1Q8N6C5 1336 aa16.04■□□□□ 0.16
PCNX3-202ENST00000439247 FBXW7Q969H0 707 aa16.04■□□□□ 0.16
PCNX3-202ENST00000439247 DDX41Q9UJV9 622 aaKnown RBP16.04■□□□□ 0.16
PCNX3-202ENST00000439247 PHRF1Q9P1Y6 1649 aaKnown RBP16.04■□□□□ 0.16
PCNX3-202ENST00000439247 SLFN14P0C7P3 912 aa16.03■□□□□ 0.16
PCNX3-202ENST00000439247 FOSBP53539 338 aa16.03■□□□□ 0.16
PCNX3-202ENST00000439247 NECTIN1Q15223 517 aa16.03■□□□□ 0.16
PCNX3-202ENST00000439247 CREB3L3Q68CJ9 461 aa16.03■□□□□ 0.16
PCNX3-202ENST00000439247 BICD2Q8TD16 824 aa16.03■□□□□ 0.16
PCNX3-202ENST00000439247 ZNF215Q9UL58 517 aaPredicted RBP16.03■□□□□ 0.16
PCNX3-202ENST00000439247 EPB41L2O43491 1005 aaKnown RBP16.03■□□□□ 0.16
PCNX3-202ENST00000439247 LEO1Q8WVC0 666 aaPredicted RBP16.03■□□□□ 0.16
PCNX3-202ENST00000439247 KMT5BQ4FZB7 885 aa16.03■□□□□ 0.16
PCNX3-202ENST00000439247 CEP135Q66GS9 1140 aa16.03■□□□□ 0.16
PCNX3-202ENST00000439247 KIF18AQ8NI77 898 aa16.03■□□□□ 0.16
PCNX3-202ENST00000439247 ERCC4Q92889 916 aaPredicted RBP16.03■□□□□ 0.16
PCNX3-202ENST00000439247 SH2B1Q9NRF2 756 aaPredicted RBP16.03■□□□□ 0.16
PCNX3-202ENST00000439247 ARHGEF10O15013 1369 aa16.03■□□□□ 0.16
PCNX3-202ENST00000439247 NHSL1Q5SYE7 1610 aa16.03■□□□□ 0.16
PCNX3-202ENST00000439247 JAK2O60674 1132 aa16.02■□□□□ 0.16
PCNX3-202ENST00000439247 PPFIA3O75145 1194 aa16.02■□□□□ 0.16
PCNX3-202ENST00000439247 RGPD2P0DJD1 1756 aa16.02■□□□□ 0.16
PCNX3-202ENST00000439247 ZSCAN31Q96LW9 406 aaPredicted RBP16.02■□□□□ 0.16
PCNX3-202ENST00000439247 RGPD5Q99666 1765 aa16.02■□□□□ 0.16
PCNX3-202ENST00000439247 PI4KAP2A4QPH2 592 aa16.02■□□□□ 0.15
PCNX3-202ENST00000439247 C11orf57Q6ZUT1 292 aaPredicted RBP16.02■□□□□ 0.15
PCNX3-202ENST00000439247 PI4KAP1Q8N8J0 262 aa16.02■□□□□ 0.15
PCNX3-202ENST00000439247 USP16Q9Y5T5 823 aa16.02■□□□□ 0.15
PCNX3-202ENST00000439247 CRYBG1Q9Y4K1 1723 aa16.02■□□□□ 0.15
PCNX3-202ENST00000439247 FAM208AQ9UK61 1670 aaKnown RBP16.02■□□□□ 0.15
PCNX3-202ENST00000439247 ANKRD24Q8TF21 1146 aa16.01■□□□□ 0.15
PCNX3-202ENST00000439247 BBXQ8WY36 941 aaPredicted RBP16.01■□□□□ 0.15
PCNX3-202ENST00000439247 CCDC171Q6TFL3 1326 aa16.01■□□□□ 0.15
PCNX3-202ENST00000439247 GNAT3A8MTJ3 354 aa16.01■□□□□ 0.15
PCNX3-202ENST00000439247 NMIQ13287 307 aaPredicted RBP16.01■□□□□ 0.15
PCNX3-202ENST00000439247 FILIP1Q7Z7B0 1213 aa16.01■□□□□ 0.15
PCNX3-202ENST00000439247 FTOQ9C0B1 505 aaKnown RBP eCLIP16.01■□□□□ 0.15
PCNX3-202ENST00000439247 CLSTN2Q9H4D0 955 aa16.01■□□□□ 0.15
PCNX3-202ENST00000439247 GLRX3O76003 335 aaKnown RBP16.01■□□□□ 0.15
PCNX3-202ENST00000439247 TDRD7Q8NHU6 1098 aaKnown RBP16.01■□□□□ 0.15
PCNX3-202ENST00000439247 CHPF2Q9P2E5 772 aa16.01■□□□□ 0.15
PCNX3-202ENST00000439247 PDIA4P13667 645 aaKnown RBP16■□□□□ 0.15
PCNX3-202ENST00000439247 KDRP35968 1356 aa16■□□□□ 0.15
PCNX3-202ENST00000439247 ERICH4A6NGS2 130 aa16■□□□□ 0.15
PCNX3-202ENST00000439247 SLC27A2O14975 620 aa16■□□□□ 0.15
PCNX3-202ENST00000439247 KCNQ3O43525 872 aa16■□□□□ 0.15
PCNX3-202ENST00000439247 ZKSCAN1P17029 563 aaPredicted RBP16■□□□□ 0.15
PCNX3-202ENST00000439247 ELF2Q15723 593 aa16■□□□□ 0.15
PCNX3-202ENST00000439247 LRRC8AQ8IWT6 810 aa15.99■□□□□ 0.15
PCNX3-202ENST00000439247 CCDC8Q9H0W5 538 aaPredicted RBP15.99■□□□□ 0.15
PCNX3-202ENST00000439247 A0A0D9SFI3 127 aa15.99■□□□□ 0.15
PCNX3-202ENST00000439247 CHGBP05060 677 aa15.99■□□□□ 0.15
PCNX3-202ENST00000439247 GTF2E1P29083 439 aaPredicted RBP15.99■□□□□ 0.15
PCNX3-202ENST00000439247 TOB2Q14106 344 aaPredicted RBP15.99■□□□□ 0.15
PCNX3-202ENST00000439247 FBXO38Q6PIJ6 1188 aa15.99■□□□□ 0.15
PCNX3-202ENST00000439247 RUFY2Q8WXA3 655 aa15.99■□□□□ 0.15
PCNX3-202ENST00000439247 TLR7Q9NYK1 1049 aaKnown RBP15.99■□□□□ 0.15
PCNX3-202ENST00000439247 MORC2Q9Y6X9 1032 aaPredicted RBP15.99■□□□□ 0.15
PCNX3-202ENST00000439247 ELP1O95163 1332 aa15.98■□□□□ 0.15
PCNX3-202ENST00000439247 ADRA2BP18089 450 aa15.98■□□□□ 0.15
PCNX3-202ENST00000439247 FGD1P98174 961 aa15.98■□□□□ 0.15
PCNX3-202ENST00000439247 AACSQ86V21 672 aa15.98■□□□□ 0.15
PCNX3-202ENST00000439247 CLASRPQ8N2M8 674 aaKnown RBP15.98■□□□□ 0.15
PCNX3-202ENST00000439247 EDC3Q96F86 508 aaKnown RBP15.98■□□□□ 0.15
PCNX3-202ENST00000439247 TM6SF1Q9BZW5 370 aa15.98■□□□□ 0.15
PCNX3-202ENST00000439247 ECHDC1Q9NTX5 307 aa15.98■□□□□ 0.15
PCNX3-202ENST00000439247 PAXBP1Q9Y5B6 917 aa15.98■□□□□ 0.15
PCNX3-202ENST00000439247 MAPK8IP2Q13387 824 aaPredicted RBP15.98■□□□□ 0.15
PCNX3-202ENST00000439247 BEND3Q5T5X7 828 aa15.98■□□□□ 0.15
PCNX3-202ENST00000439247 LRRN4CLQ8ND94 238 aa15.98■□□□□ 0.15
PCNX3-202ENST00000439247 MAP3K5Q99683 1374 aa15.98■□□□□ 0.15
PCNX3-202ENST00000439247 ERBB3P21860 1342 aa15.98■□□□□ 0.15
PCNX3-202ENST00000439247 IFIT2P09913 472 aaKnown RBP15.97■□□□□ 0.15
PCNX3-202ENST00000439247 SKILP12757 684 aa15.97■□□□□ 0.15
PCNX3-202ENST00000439247 DDX19AQ9NUU7 478 aaKnown RBP15.97■□□□□ 0.15
PCNX3-202ENST00000439247 VGLL3A8MV65 326 aa15.97■□□□□ 0.15
PCNX3-202ENST00000439247 UBAP1LF5GYI3 381 aa15.97■□□□□ 0.15
PCNX3-202ENST00000439247 TERF2Q15554 542 aa15.97■□□□□ 0.15
PCNX3-202ENST00000439247 RBM43Q6ZSC3 357 aaKnown RBP15.97■□□□□ 0.15
PCNX3-202ENST00000439247 SCAND2PQ9GZW5 306 aaPredicted RBP15.97■□□□□ 0.15
PCNX3-202ENST00000439247 TMEM51Q9NW97 253 aa15.97■□□□□ 0.15
PCNX3-202ENST00000439247 IQCB1Q15051 598 aa15.97■□□□□ 0.15
PCNX3-202ENST00000439247 BLOC1S2Q6QNY1 142 aa15.97■□□□□ 0.15
PCNX3-202ENST00000439247 ZNF589Q86UQ0 364 aaPredicted RBP15.97■□□□□ 0.15
PCNX3-202ENST00000439247 LRRC2Q9BYS8 371 aa15.97■□□□□ 0.15
PCNX3-202ENST00000439247 BOLA2Q9H3K6 86 aa15.97■□□□□ 0.15
PCNX3-202ENST00000439247 NDUFB9Q9Y6M9 179 aa15.97■□□□□ 0.15
PCNX3-202ENST00000439247 RBM6P78332 1123 aaKnown RBP15.96■□□□□ 0.15
PCNX3-202ENST00000439247 PTPN14Q15678 1187 aa15.96■□□□□ 0.15
PCNX3-202ENST00000439247 DNAAF4Q8WXU2 420 aa15.96■□□□□ 0.15
PCNX3-202ENST00000439247 MAP4K1Q92918 833 aa15.96■□□□□ 0.15
PCNX3-202ENST00000439247 KCNB2Q92953 911 aa15.96■□□□□ 0.15
PCNX3-202ENST00000439247 COL18A1P39060 1754 aa15.96■□□□□ 0.15
PCNX3-202ENST00000439247 SYCP1Q15431 976 aa15.96■□□□□ 0.14
PCNX3-202ENST00000439247 BRF1Q92994 677 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms