RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 ATP6V1DQ9Y5K8 247 aa14.5□□□□□ -0.09
HDAC8-214ENST00000439122 LAMB4A4D0S4 1761 aa14.5□□□□□ -0.09
HDAC8-214ENST00000439122 ERVV-2B6SEH9 535 aa14.5□□□□□ -0.09
HDAC8-214ENST00000439122 BLOC1S2Q6QNY1 142 aa14.5□□□□□ -0.09
HDAC8-214ENST00000439122 TCEANC2Q96MN5 208 aa14.5□□□□□ -0.09
HDAC8-214ENST00000439122 CWC25Q9NXE8 425 aaPredicted RBP14.5□□□□□ -0.09
HDAC8-214ENST00000439122 GLI3P10071 1580 aa14.49□□□□□ -0.09
HDAC8-214ENST00000439122 COL9A3Q14050 684 aaPredicted RBP14.49□□□□□ -0.09
HDAC8-214ENST00000439122 TAF6LQ9Y6J9 622 aa14.49□□□□□ -0.09
HDAC8-214ENST00000439122 PARP4Q9UKK3 1724 aaKnown RBP14.49□□□□□ -0.09
HDAC8-214ENST00000439122 H7C1W4 665 aa14.49□□□□□ -0.09
HDAC8-214ENST00000439122 TAF5LO75529 589 aa14.49□□□□□ -0.09
HDAC8-214ENST00000439122 FOXO4P98177 505 aa14.49□□□□□ -0.09
HDAC8-214ENST00000439122 ST3GAL1Q11201 340 aa14.49□□□□□ -0.09
HDAC8-214ENST00000439122 TMEM87AQ8NBN3 555 aa14.49□□□□□ -0.09
HDAC8-214ENST00000439122 RNF214Q8ND24 703 aa14.49□□□□□ -0.09
HDAC8-214ENST00000439122 ZBTB3Q9H5J0 574 aa14.49□□□□□ -0.09
HDAC8-214ENST00000439122 STRN4Q9NRL3 753 aa14.49□□□□□ -0.09
HDAC8-214ENST00000439122 FIBPO43427 364 aa14.48□□□□□ -0.09
HDAC8-214ENST00000439122 PHF14O94880 888 aa14.48□□□□□ -0.09
HDAC8-214ENST00000439122 IL2RBP14784 551 aa14.48□□□□□ -0.09
HDAC8-214ENST00000439122 HMG20BQ9P0W2 317 aa14.48□□□□□ -0.09
HDAC8-214ENST00000439122 VPS37CA5D8V6 355 aaPredicted RBP14.48□□□□□ -0.09
HDAC8-214ENST00000439122 DDX46Q7L014 1031 aaKnown RBP14.48□□□□□ -0.09
HDAC8-214ENST00000439122 NEUROD6Q96NK8 337 aa14.48□□□□□ -0.09
HDAC8-214ENST00000439122 SLAIN2Q9P270 581 aa14.48□□□□□ -0.09
HDAC8-214ENST00000439122 MTMR6Q9Y217 621 aa14.48□□□□□ -0.09
HDAC8-214ENST00000439122 COL5A2P05997 1499 aaPredicted RBP14.48□□□□□ -0.09
HDAC8-214ENST00000439122 CHGBP05060 677 aa14.47□□□□□ -0.09
HDAC8-214ENST00000439122 RPS6KB1P23443 525 aa14.47□□□□□ -0.09
HDAC8-214ENST00000439122 ANKRD1Q15327 319 aa14.47□□□□□ -0.09
HDAC8-214ENST00000439122 HAUS7Q99871 368 aa14.47□□□□□ -0.09
HDAC8-214ENST00000439122 TSPY26PQ9H489 355 aa14.47□□□□□ -0.09
HDAC8-214ENST00000439122 XIRP1Q702N8 1843 aaKnown RBP14.47□□□□□ -0.09
HDAC8-214ENST00000439122 EVA1CP58658 441 aa14.47□□□□□ -0.09
HDAC8-214ENST00000439122 CCDC129Q6ZRS4 1044 aa14.47□□□□□ -0.09
HDAC8-214ENST00000439122 UBE2HP62256 183 aa14.46□□□□□ -0.09
HDAC8-214ENST00000439122 DNM1Q05193 864 aaKnown RBP14.46□□□□□ -0.09
HDAC8-214ENST00000439122 SEC62Q99442 399 aaKnown RBP14.46□□□□□ -0.09
HDAC8-214ENST00000439122 CARD10Q9BWT7 1032 aa14.46□□□□□ -0.09
HDAC8-214ENST00000439122 SOS2Q07890 1332 aaPredicted RBP14.46□□□□□ -0.09
HDAC8-214ENST00000439122 JCADQ9P266 1359 aa14.46□□□□□ -0.1
HDAC8-214ENST00000439122 NKX1-1Q15270 411 aaPredicted RBP14.46□□□□□ -0.1
HDAC8-214ENST00000439122 MCMDC2Q4G0Z9 681 aa14.46□□□□□ -0.1
HDAC8-214ENST00000439122 LARP1BQ659C4 914 aaKnown RBP14.46□□□□□ -0.1
HDAC8-214ENST00000439122 ATG9AQ7Z3C6 839 aa14.46□□□□□ -0.1
HDAC8-214ENST00000439122 CCDC191Q8NCU4 936 aa14.46□□□□□ -0.1
HDAC8-214ENST00000439122 ZNF330Q9Y3S2 320 aaPredicted RBP14.46□□□□□ -0.1
HDAC8-214ENST00000439122 ZNF609O15014 1411 aa14.45□□□□□ -0.1
HDAC8-214ENST00000439122 TIMM10P62072 90 aa14.45□□□□□ -0.1
HDAC8-214ENST00000439122 TSGA10IPQ3SY00 556 aa14.45□□□□□ -0.1
HDAC8-214ENST00000439122 USPL1Q5W0Q7 1092 aa14.45□□□□□ -0.1
HDAC8-214ENST00000439122 ZSCAN30Q86W11 494 aa14.45□□□□□ -0.1
HDAC8-214ENST00000439122 KCPQ6ZWJ8 1503 aa14.45□□□□□ -0.1
HDAC8-214ENST00000439122 TOB2Q14106 344 aaPredicted RBP14.44□□□□□ -0.1
HDAC8-214ENST00000439122 KRT32Q14532 448 aa14.44□□□□□ -0.1
HDAC8-214ENST00000439122 ZNF594Q96JF6 807 aaPredicted RBP14.44□□□□□ -0.1
HDAC8-214ENST00000439122 PDLIM2Q96JY6 352 aa14.44□□□□□ -0.1
HDAC8-214ENST00000439122 RFX7Q2KHR2 1363 aa14.44□□□□□ -0.1
HDAC8-214ENST00000439122 GOLIM4O00461 696 aa14.44□□□□□ -0.1
HDAC8-214ENST00000439122 IL15P40933 162 aaPredicted RBP14.44□□□□□ -0.1
HDAC8-214ENST00000439122 STK3Q13188 491 aa14.44□□□□□ -0.1
HDAC8-214ENST00000439122 CSPP1Q1MSJ5 1256 aa14.44□□□□□ -0.1
HDAC8-214ENST00000439122 CCDC183Q5T5S1 534 aa14.44□□□□□ -0.1
HDAC8-214ENST00000439122 KBTBD3Q8NAB2 608 aa14.44□□□□□ -0.1
HDAC8-214ENST00000439122 UBR2Q8IWV8 1755 aa14.44□□□□□ -0.1
HDAC8-214ENST00000439122 MSNP26038 577 aaKnown RBP14.43□□□□□ -0.1
HDAC8-214ENST00000439122 LRRC24Q50LG9 513 aa14.43□□□□□ -0.1
HDAC8-214ENST00000439122 NAP1L5Q96NT1 182 aaPredicted RBP14.43□□□□□ -0.1
HDAC8-214ENST00000439122 NEK1Q96PY6 1258 aa14.43□□□□□ -0.1
HDAC8-214ENST00000439122 ALDH8A1Q9H2A2 487 aaPredicted RBP14.43□□□□□ -0.1
HDAC8-214ENST00000439122 U3KPZ7 1027 aaPredicted RBP14.43□□□□□ -0.1
HDAC8-214ENST00000439122 PDCP20941 246 aa14.43□□□□□ -0.1
HDAC8-214ENST00000439122 PAG1Q9NWQ8 432 aa14.43□□□□□ -0.1
HDAC8-214ENST00000439122 TMOD3Q9NYL9 352 aa14.43□□□□□ -0.1
HDAC8-214ENST00000439122 NUP188Q5SRE5 1749 aa14.43□□□□□ -0.1
HDAC8-214ENST00000439122 EYA2O00167 538 aa14.42□□□□□ -0.1
HDAC8-214ENST00000439122 FERMT3Q86UX7 667 aa14.42□□□□□ -0.1
HDAC8-214ENST00000439122 CYP21A2P08686 494 aa14.42□□□□□ -0.1
HDAC8-214ENST00000439122 SLFNL1Q499Z3 407 aa14.42□□□□□ -0.1
HDAC8-214ENST00000439122 HS1BP3Q53T59 392 aa14.42□□□□□ -0.1
HDAC8-214ENST00000439122 CDC37L1Q7L3B6 337 aa14.42□□□□□ -0.1
HDAC8-214ENST00000439122 ZNF335Q9H4Z2 1342 aaPredicted RBP14.42□□□□□ -0.1
HDAC8-214ENST00000439122 PDIA4P13667 645 aaKnown RBP14.41□□□□□ -0.1
HDAC8-214ENST00000439122 GPR108Q9NPR9 543 aa14.41□□□□□ -0.1
HDAC8-214ENST00000439122 LETM1O95202 739 aaPredicted RBP14.41□□□□□ -0.1
HDAC8-214ENST00000439122 HSP90B1P14625 803 aaKnown RBP14.41□□□□□ -0.1
HDAC8-214ENST00000439122 SH3TC1Q8TE82 1336 aa14.41□□□□□ -0.1
HDAC8-214ENST00000439122 TJP1Q07157 1748 aa14.41□□□□□ -0.1
HDAC8-214ENST00000439122 TNS2Q63HR2 1409 aa14.4□□□□□ -0.1
HDAC8-214ENST00000439122 A0A1B0GUL7 405 aa14.4□□□□□ -0.1
HDAC8-214ENST00000439122 CCDC57Q2TAC2 916 aa14.4□□□□□ -0.1
HDAC8-214ENST00000439122 Q6ZUG5 572 aa14.4□□□□□ -0.1
HDAC8-214ENST00000439122 PUS3Q9BZE2 481 aaKnown RBP14.4□□□□□ -0.1
HDAC8-214ENST00000439122 PAPPAQ13219 1627 aa14.4□□□□□ -0.1
HDAC8-214ENST00000439122 PALLDQ8WX93 1383 aa14.4□□□□□ -0.1
HDAC8-214ENST00000439122 IFIT1P09914 478 aaKnown RBP14.4□□□□□ -0.11
HDAC8-214ENST00000439122 KRT85P78386 507 aa14.4□□□□□ -0.11
HDAC8-214ENST00000439122 FGD1P98174 961 aa14.4□□□□□ -0.11
HDAC8-214ENST00000439122 CCDC85AQ96PX6 553 aaPredicted RBP14.4□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms