RNA–Protein interactions for RNA: ENST00000437113.2

LINC01039-201, Transcript of long intergenic non-protein coding RNA 1039, humanhuman

TSL 5 BASIC

Gene LINC01039, Length 650 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01039-201ENST00000437113 PIM2Q9P1W9 311 aa13.07□□□□□ -0.32
LINC01039-201ENST00000437113 PCDHB15Q9Y5E8 787 aa13.07□□□□□ -0.32
LINC01039-201ENST00000437113 COL11A2P13942 1736 aaPredicted RBP13.06□□□□□ -0.32
LINC01039-201ENST00000437113 CRY2Q49AN0 593 aa13.06□□□□□ -0.32
LINC01039-201ENST00000437113 STYK1Q6J9G0 422 aa13.06□□□□□ -0.32
LINC01039-201ENST00000437113 CEP85Q6P2H3 762 aa13.06□□□□□ -0.32
LINC01039-201ENST00000437113 MASTLQ96GX5 879 aa13.06□□□□□ -0.32
LINC01039-201ENST00000437113 SUCLG2Q96I99 432 aa13.06□□□□□ -0.32
LINC01039-201ENST00000437113 ABCC12Q96J65 1359 aa13.06□□□□□ -0.32
LINC01039-201ENST00000437113 H7C1W4 665 aa13.05□□□□□ -0.32
LINC01039-201ENST00000437113 SRGNP10124 158 aa13.05□□□□□ -0.32
LINC01039-201ENST00000437113 NPR1P16066 1061 aa13.05□□□□□ -0.32
LINC01039-201ENST00000437113 KCNA3P22001 575 aa13.05□□□□□ -0.32
LINC01039-201ENST00000437113 CCDC24Q8N4L8 307 aa13.05□□□□□ -0.32
LINC01039-201ENST00000437113 ANKRD44Q8N8A2 993 aa13.05□□□□□ -0.32
LINC01039-201ENST00000437113 CNKSR1Q969H4 720 aa13.05□□□□□ -0.32
LINC01039-201ENST00000437113 FAM89AQ96GI7 184 aa13.05□□□□□ -0.32
LINC01039-201ENST00000437113 BICC1Q9H694 974 aaKnown RBP13.05□□□□□ -0.32
LINC01039-201ENST00000437113 CHMP3Q9Y3E7 222 aa13.05□□□□□ -0.32
LINC01039-201ENST00000437113 CACNA1SQ13698 1873 aa13.05□□□□□ -0.32
LINC01039-201ENST00000437113 CDHR2Q9BYE9 1310 aa13.05□□□□□ -0.32
LINC01039-201ENST00000437113 TNRC6CQ9HCJ0 1690 aaKnown RBP13.05□□□□□ -0.32
LINC01039-201ENST00000437113 CHRNA5P30532 468 aa13.04□□□□□ -0.32
LINC01039-201ENST00000437113 ALDH1B1P30837 517 aa13.04□□□□□ -0.32
LINC01039-201ENST00000437113 GPR162Q16538 588 aa13.04□□□□□ -0.32
LINC01039-201ENST00000437113 DALRD3Q5D0E6 543 aaKnown RBP13.04□□□□□ -0.32
LINC01039-201ENST00000437113 CENPQQ7L2Z9 268 aaPredicted RBP13.04□□□□□ -0.32
LINC01039-201ENST00000437113 IRS4O14654 1257 aaPredicted RBP13.03□□□□□ -0.32
LINC01039-201ENST00000437113 SRGAP3O43295 1099 aa13.03□□□□□ -0.32
LINC01039-201ENST00000437113 GRIN3BO60391 1043 aa13.03□□□□□ -0.32
LINC01039-201ENST00000437113 HOXA10P31260 410 aaPredicted RBP13.03□□□□□ -0.32
LINC01039-201ENST00000437113 HDAC1Q13547 482 aaPredicted RBP13.03□□□□□ -0.32
LINC01039-201ENST00000437113 TTLL6Q8N841 843 aa13.03□□□□□ -0.32
LINC01039-201ENST00000437113 RPGRQ92834 1020 aaKnown RBP13.03□□□□□ -0.32
LINC01039-201ENST00000437113 ZNF622Q969S3 477 aaKnown RBP eCLIP13.03□□□□□ -0.32
LINC01039-201ENST00000437113 SPEF2Q9C093 1822 aa13.03□□□□□ -0.32
LINC01039-201ENST00000437113 CHD4Q14839 1912 aa13.02□□□□□ -0.32
LINC01039-201ENST00000437113 PDE8AO60658 829 aa13.02□□□□□ -0.33
LINC01039-201ENST00000437113 HCLS1P14317 486 aaPredicted RBP13.02□□□□□ -0.33
LINC01039-201ENST00000437113 CASP7P55210 303 aa13.02□□□□□ -0.33
LINC01039-201ENST00000437113 ATP8B2P98198 1209 aa13.02□□□□□ -0.33
LINC01039-201ENST00000437113 SF3B3Q15393 1217 aaKnown RBP13.02□□□□□ -0.33
LINC01039-201ENST00000437113 RBM17Q96I25 401 aaKnown RBP13.02□□□□□ -0.33
LINC01039-201ENST00000437113 CRAMP1Q96RY5 1269 aa13.02□□□□□ -0.33
LINC01039-201ENST00000437113 ZBTB47Q9UFB7 747 aaPredicted RBP13.02□□□□□ -0.33
LINC01039-201ENST00000437113 PNMA6EA0A0J9YXQ4 647 aa13.01□□□□□ -0.33
LINC01039-201ENST00000437113 IGHDP01880 384 aa13.01□□□□□ -0.33
LINC01039-201ENST00000437113 SYNE4Q8N205 404 aa13.01□□□□□ -0.33
LINC01039-201ENST00000437113 PLA2G12BQ9BX93 195 aa13.01□□□□□ -0.33
LINC01039-201ENST00000437113 BCS1LQ9Y276 419 aa13.01□□□□□ -0.33
LINC01039-201ENST00000437113 SLX4Q8IY92 1834 aa13.01□□□□□ -0.33
LINC01039-201ENST00000437113 KDM2BQ8NHM5 1336 aa13□□□□□ -0.33
LINC01039-201ENST00000437113 CTSWP56202 376 aa13□□□□□ -0.33
LINC01039-201ENST00000437113 OS9Q13438 667 aaPredicted RBP13□□□□□ -0.33
LINC01039-201ENST00000437113 MTX1Q13505 466 aa13□□□□□ -0.33
LINC01039-201ENST00000437113 CCDC152Q4G0S7 254 aa13□□□□□ -0.33
LINC01039-201ENST00000437113 EPHA10Q5JZY3 1008 aa13□□□□□ -0.33
LINC01039-201ENST00000437113 SOGA3Q5TF21 947 aa13□□□□□ -0.33
LINC01039-201ENST00000437113 LMBR1LQ6UX01 489 aa13□□□□□ -0.33
LINC01039-201ENST00000437113 DDX46Q7L014 1031 aaKnown RBP13□□□□□ -0.33
LINC01039-201ENST00000437113 SIRT2Q8IXJ6 389 aa13□□□□□ -0.33
LINC01039-201ENST00000437113 PELP1Q8IZL8 1130 aaKnown RBP13□□□□□ -0.33
LINC01039-201ENST00000437113 GCC1Q96CN9 775 aa13□□□□□ -0.33
LINC01039-201ENST00000437113 KAZALD1Q96I82 304 aa13□□□□□ -0.33
LINC01039-201ENST00000437113 BBOX1O75936 387 aa12.99□□□□□ -0.33
LINC01039-201ENST00000437113 FOXO4P98177 505 aa12.99□□□□□ -0.33
LINC01039-201ENST00000437113 RABL6Q3YEC7 729 aaPredicted RBP12.99□□□□□ -0.33
LINC01039-201ENST00000437113 GRIPAP1Q4V328 841 aa12.99□□□□□ -0.33
LINC01039-201ENST00000437113 TAF7LQ5H9L4 462 aa12.99□□□□□ -0.33
LINC01039-201ENST00000437113 CC2D2BQ6DHV5 1058 aa12.99□□□□□ -0.33
LINC01039-201ENST00000437113 TMC4Q7Z404 712 aa12.99□□□□□ -0.33
LINC01039-201ENST00000437113 SSH3Q8TE77 659 aa12.99□□□□□ -0.33
LINC01039-201ENST00000437113 CCDC85AQ96PX6 553 aaPredicted RBP12.99□□□□□ -0.33
LINC01039-201ENST00000437113 RTL9Q8NET4 1388 aa12.98□□□□□ -0.33
LINC01039-201ENST00000437113 TAF1P21675 1872 aa12.98□□□□□ -0.33
LINC01039-201ENST00000437113 YBX3P16989 372 aaKnown RBP eCLIP12.98□□□□□ -0.33
LINC01039-201ENST00000437113 POLA2Q14181 598 aa12.98□□□□□ -0.33
LINC01039-201ENST00000437113 CCDC57Q2TAC2 916 aa12.98□□□□□ -0.33
LINC01039-201ENST00000437113 HSP90AB4PQ58FF6 505 aa12.98□□□□□ -0.33
LINC01039-201ENST00000437113 PRPF40BQ6NWY9 871 aaKnown RBP12.98□□□□□ -0.33
LINC01039-201ENST00000437113 C3orf67Q6ZVT6 689 aa12.98□□□□□ -0.33
LINC01039-201ENST00000437113 TMX4Q9H1E5 349 aaPredicted RBP12.98□□□□□ -0.33
LINC01039-201ENST00000437113 GOLGB1Q14789 3259 aaKnown RBP12.98□□□□□ -0.33
LINC01039-201ENST00000437113 FER1L6Q2WGJ9 1857 aa12.97□□□□□ -0.33
LINC01039-201ENST00000437113 APBB1O00213 710 aa12.97□□□□□ -0.33
LINC01039-201ENST00000437113 SURF6O75683 361 aaKnown RBP12.97□□□□□ -0.33
LINC01039-201ENST00000437113 IFIT5Q13325 482 aaKnown RBP12.97□□□□□ -0.33
LINC01039-201ENST00000437113 GRAPQ13588 217 aa12.97□□□□□ -0.33
LINC01039-201ENST00000437113 FAM161AQ3B820 660 aa12.97□□□□□ -0.33
LINC01039-201ENST00000437113 GRAPLQ8TC17 118 aaPredicted RBP12.97□□□□□ -0.33
LINC01039-201ENST00000437113 EXOC6BQ9Y2D4 811 aa12.97□□□□□ -0.33
LINC01039-201ENST00000437113 SBF1O95248 1867 aa12.96□□□□□ -0.33
LINC01039-201ENST00000437113 ANKRD18BA2A2Z9 1011 aa12.96□□□□□ -0.33
LINC01039-201ENST00000437113 CSF1RP07333 972 aa12.96□□□□□ -0.33
LINC01039-201ENST00000437113 G3BP1Q13283 466 aaKnown RBP eCLIP12.96□□□□□ -0.33
LINC01039-201ENST00000437113 SMC5Q8IY18 1101 aa12.96□□□□□ -0.33
LINC01039-201ENST00000437113 TTLL11Q8NHH1 800 aa12.96□□□□□ -0.33
LINC01039-201ENST00000437113 BCL11AQ9H165 835 aa12.96□□□□□ -0.33
LINC01039-201ENST00000437113 SIL1Q9H173 461 aa12.96□□□□□ -0.33
LINC01039-201ENST00000437113 DCTPP1Q9H773 170 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms