RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 ERICH4A6NGS2 130 aa14.63□□□□□ -0.07
TMEM116-202ENST00000437003 PTH1RQ03431 593 aa14.63□□□□□ -0.07
TMEM116-202ENST00000437003 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.63□□□□□ -0.07
TMEM116-202ENST00000437003 IFIT2P09913 472 aaKnown RBP14.63□□□□□ -0.07
TMEM116-202ENST00000437003 GABPB1Q06547 395 aaPredicted RBP14.63□□□□□ -0.07
TMEM116-202ENST00000437003 JAKMIP1Q96N16 626 aaKnown RBP14.63□□□□□ -0.07
TMEM116-202ENST00000437003 GLRX3O76003 335 aaKnown RBP14.62□□□□□ -0.07
TMEM116-202ENST00000437003 KCNJ4P48050 445 aa14.62□□□□□ -0.07
TMEM116-202ENST00000437003 ADCK5Q3MIX3 580 aa14.62□□□□□ -0.07
TMEM116-202ENST00000437003 TAF3Q5VWG9 929 aa14.62□□□□□ -0.07
TMEM116-202ENST00000437003 KIF18AQ8NI77 898 aa14.62□□□□□ -0.07
TMEM116-202ENST00000437003 PXDNQ92626 1479 aa14.62□□□□□ -0.07
TMEM116-202ENST00000437003 EPB41L2O43491 1005 aaKnown RBP14.62□□□□□ -0.07
TMEM116-202ENST00000437003 AACSQ86V21 672 aa14.62□□□□□ -0.07
TMEM116-202ENST00000437003 CACTINQ8WUQ7 758 aaKnown RBP14.62□□□□□ -0.07
TMEM116-202ENST00000437003 TNMDQ9H2S6 317 aa14.62□□□□□ -0.07
TMEM116-202ENST00000437003 DACT1Q9NYF0 836 aa14.62□□□□□ -0.07
TMEM116-202ENST00000437003 AXIN2Q9Y2T1 843 aa14.62□□□□□ -0.07
TMEM116-202ENST00000437003 LMO7Q8WWI1 1683 aa14.62□□□□□ -0.07
TMEM116-202ENST00000437003 NPHP1O15259 732 aa14.62□□□□□ -0.07
TMEM116-202ENST00000437003 KSR2Q6VAB6 950 aa14.62□□□□□ -0.07
TMEM116-202ENST00000437003 IL17RAQ96F46 866 aa14.62□□□□□ -0.07
TMEM116-202ENST00000437003 SIL1Q9H173 461 aa14.62□□□□□ -0.07
TMEM116-202ENST00000437003 ZNF75DP51815 510 aa14.61□□□□□ -0.07
TMEM116-202ENST00000437003 HYPKQ9NX55 129 aa14.61□□□□□ -0.07
TMEM116-202ENST00000437003 TFIP11Q9UBB9 837 aaKnown RBP14.61□□□□□ -0.07
TMEM116-202ENST00000437003 GOLGA6L4A6NEF3 574 aa14.61□□□□□ -0.07
TMEM116-202ENST00000437003 ALDH1L1O75891 902 aa14.61□□□□□ -0.07
TMEM116-202ENST00000437003 CCDC144BQ3MJ40 725 aa14.61□□□□□ -0.07
TMEM116-202ENST00000437003 CCDC144CPQ8IYA2 1237 aa14.61□□□□□ -0.07
TMEM116-202ENST00000437003 ST7Q9NRC1 585 aa14.61□□□□□ -0.07
TMEM116-202ENST00000437003 CLIP2Q9UDT6 1046 aa14.61□□□□□ -0.07
TMEM116-202ENST00000437003 USP27XA6NNY8 438 aa14.6□□□□□ -0.07
TMEM116-202ENST00000437003 ARID5BQ14865 1188 aa14.6□□□□□ -0.07
TMEM116-202ENST00000437003 TERF2Q15554 542 aa14.6□□□□□ -0.07
TMEM116-202ENST00000437003 CEP135Q66GS9 1140 aa14.6□□□□□ -0.07
TMEM116-202ENST00000437003 CDC37L1Q7L3B6 337 aa14.6□□□□□ -0.07
TMEM116-202ENST00000437003 ECHDC1Q9NTX5 307 aa14.6□□□□□ -0.07
TMEM116-202ENST00000437003 PDRG1Q9NUG6 133 aa14.6□□□□□ -0.07
TMEM116-202ENST00000437003 ZNF215Q9UL58 517 aaPredicted RBP14.6□□□□□ -0.07
TMEM116-202ENST00000437003 TTC41PQ6P2S7 1318 aa14.6□□□□□ -0.07
TMEM116-202ENST00000437003 NCAPD2Q15021 1401 aa14.6□□□□□ -0.07
TMEM116-202ENST00000437003 KRT85P78386 507 aa14.6□□□□□ -0.07
TMEM116-202ENST00000437003 MTX1Q13505 466 aa14.6□□□□□ -0.07
TMEM116-202ENST00000437003 KMT5BQ4FZB7 885 aa14.6□□□□□ -0.07
TMEM116-202ENST00000437003 LARP1BQ659C4 914 aaKnown RBP14.6□□□□□ -0.07
TMEM116-202ENST00000437003 CCDC8Q9H0W5 538 aaPredicted RBP14.6□□□□□ -0.07
TMEM116-202ENST00000437003 DNAJC25Q9H1X3 360 aa14.6□□□□□ -0.07
TMEM116-202ENST00000437003 PAXBP1Q9Y5B6 917 aa14.6□□□□□ -0.07
TMEM116-202ENST00000437003 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.6□□□□□ -0.07
TMEM116-202ENST00000437003 MORC2Q9Y6X9 1032 aaPredicted RBP14.6□□□□□ -0.07
TMEM116-202ENST00000437003 PHRF1Q9P1Y6 1649 aaKnown RBP14.6□□□□□ -0.07
TMEM116-202ENST00000437003 SYCP1Q15431 976 aa14.59□□□□□ -0.07
TMEM116-202ENST00000437003 KRT28Q7Z3Y7 464 aa14.59□□□□□ -0.07
TMEM116-202ENST00000437003 KRT222Q8N1A0 295 aa14.59□□□□□ -0.07
TMEM116-202ENST00000437003 RUFY2Q8WXA3 655 aa14.59□□□□□ -0.07
TMEM116-202ENST00000437003 TCEANC2Q96MN5 208 aa14.59□□□□□ -0.07
TMEM116-202ENST00000437003 HDAC5Q9UQL6 1122 aa14.59□□□□□ -0.07
TMEM116-202ENST00000437003 ST3GAL1Q11201 340 aa14.59□□□□□ -0.07
TMEM116-202ENST00000437003 ME3Q16798 604 aa14.59□□□□□ -0.07
TMEM116-202ENST00000437003 GPATCH3Q96I76 525 aa14.59□□□□□ -0.07
TMEM116-202ENST00000437003 FAM227BQ96M60 508 aa14.59□□□□□ -0.07
TMEM116-202ENST00000437003 ZC3H6P61129 1189 aaKnown RBP14.58□□□□□ -0.07
TMEM116-202ENST00000437003 KLHDC4Q8TBB5 520 aa14.58□□□□□ -0.07
TMEM116-202ENST00000437003 TRMT1Q9NXH9 659 aaKnown RBP14.58□□□□□ -0.07
TMEM116-202ENST00000437003 DDX58O95786 925 aaKnown RBP14.58□□□□□ -0.08
TMEM116-202ENST00000437003 ZNF165P49910 485 aa14.58□□□□□ -0.08
TMEM116-202ENST00000437003 PLA2G4DQ86XP0 818 aa14.58□□□□□ -0.08
TMEM116-202ENST00000437003 NPHP4O75161 1426 aaPredicted RBP14.58□□□□□ -0.08
TMEM116-202ENST00000437003 HEG1Q9ULI3 1381 aa14.58□□□□□ -0.08
TMEM116-202ENST00000437003 CLSTN1O94985 981 aa14.57□□□□□ -0.08
TMEM116-202ENST00000437003 COL9A3Q14050 684 aaPredicted RBP14.57□□□□□ -0.08
TMEM116-202ENST00000437003 ELF2Q15723 593 aa14.57□□□□□ -0.08
TMEM116-202ENST00000437003 ERC1Q8IUD2 1116 aa14.57□□□□□ -0.08
TMEM116-202ENST00000437003 TLR7Q9NYK1 1049 aaKnown RBP14.57□□□□□ -0.08
TMEM116-202ENST00000437003 CYP46A1Q9Y6A2 500 aa14.57□□□□□ -0.08
TMEM116-202ENST00000437003 USP42Q9H9J4 1324 aaKnown RBP14.57□□□□□ -0.08
TMEM116-202ENST00000437003 GRM8O00222 908 aa14.57□□□□□ -0.08
TMEM116-202ENST00000437003 IRX5P78411 483 aaPredicted RBP14.57□□□□□ -0.08
TMEM116-202ENST00000437003 PROSER2Q86WR7 435 aaPredicted RBP14.57□□□□□ -0.08
TMEM116-202ENST00000437003 LINS1Q8NG48 757 aa14.57□□□□□ -0.08
TMEM116-202ENST00000437003 SUCLG2Q96I99 432 aa14.57□□□□□ -0.08
TMEM116-202ENST00000437003 BOLA2Q9H3K6 86 aa14.57□□□□□ -0.08
TMEM116-202ENST00000437003 BICC1Q9H694 974 aaKnown RBP14.57□□□□□ -0.08
TMEM116-202ENST00000437003 OVOS2A0A0G2JMS6 1433 aa14.57□□□□□ -0.08
TMEM116-202ENST00000437003 MYL6BP14649 208 aa14.56□□□□□ -0.08
TMEM116-202ENST00000437003 FBXO38Q6PIJ6 1188 aa14.56□□□□□ -0.08
TMEM116-202ENST00000437003 ZNF397Q8NF99 534 aaPredicted RBP14.56□□□□□ -0.08
TMEM116-202ENST00000437003 TRERF1Q96PN7 1200 aa14.56□□□□□ -0.08
TMEM116-202ENST00000437003 DDX21Q9NR30 783 aaKnown RBP eCLIP14.56□□□□□ -0.08
TMEM116-202ENST00000437003 SLIT3O75094 1523 aa14.56□□□□□ -0.08
TMEM116-202ENST00000437003 SLC39A6Q13433 755 aa14.56□□□□□ -0.08
TMEM116-202ENST00000437003 SPATA32Q96LK8 384 aa14.56□□□□□ -0.08
TMEM116-202ENST00000437003 RBM8AQ9Y5S9 174 aaKnown RBP14.56□□□□□ -0.08
TMEM116-202ENST00000437003 ZNF142P52746 1687 aaPredicted RBP14.56□□□□□ -0.08
TMEM116-202ENST00000437003 NR1I2O75469 434 aa14.56□□□□□ -0.08
TMEM116-202ENST00000437003 ZKSCAN1P17029 563 aaPredicted RBP14.56□□□□□ -0.08
TMEM116-202ENST00000437003 G3BP1Q13283 466 aaKnown RBP eCLIP14.56□□□□□ -0.08
TMEM116-202ENST00000437003 NMIQ13287 307 aaPredicted RBP14.56□□□□□ -0.08
TMEM116-202ENST00000437003 BICD2Q8TD16 824 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 209.9 ms