RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 GUCY1B3Q02153 619 aa18.23■□□□□ 0.51
PTPN13-204ENST00000436978 UTP14AQ9BVJ6 771 aaKnown RBP18.23■□□□□ 0.51
PTPN13-204ENST00000436978 MTIF2P46199 727 aaKnown RBP18.23■□□□□ 0.51
PTPN13-204ENST00000436978 CCDC82Q8N4S0 544 aa18.23■□□□□ 0.51
PTPN13-204ENST00000436978 CCDC102AQ96A19 550 aa18.23■□□□□ 0.51
PTPN13-204ENST00000436978 EXOC1Q9NV70 894 aa18.23■□□□□ 0.51
PTPN13-204ENST00000436978 LUZP1Q86V48 1076 aa18.23■□□□□ 0.51
PTPN13-204ENST00000436978 OGFOD1Q8N543 542 aa18.23■□□□□ 0.51
PTPN13-204ENST00000436978 NLRP3Q96P20 1036 aa18.23■□□□□ 0.51
PTPN13-204ENST00000436978 IBSPP21815 317 aaPredicted RBP18.23■□□□□ 0.51
PTPN13-204ENST00000436978 MICU3Q86XE3 530 aa18.23■□□□□ 0.51
PTPN13-204ENST00000436978 RTL9Q8NET4 1388 aa18.23■□□□□ 0.51
PTPN13-204ENST00000436978 PLCG2P16885 1265 aa18.22■□□□□ 0.51
PTPN13-204ENST00000436978 UBA7P41226 1012 aa18.22■□□□□ 0.51
PTPN13-204ENST00000436978 NAA15Q9BXJ9 866 aaKnown RBP18.22■□□□□ 0.51
PTPN13-204ENST00000436978 NBPF7P0C2Y1 421 aaPredicted RBP18.22■□□□□ 0.51
PTPN13-204ENST00000436978 IL2RBP14784 551 aa18.22■□□□□ 0.51
PTPN13-204ENST00000436978 PCDH11XQ9BZA7 1347 aa18.22■□□□□ 0.51
PTPN13-204ENST00000436978 PCDH11YQ9BZA8 1340 aa18.22■□□□□ 0.51
PTPN13-204ENST00000436978 SPDYE4A6NLX3 237 aa18.22■□□□□ 0.51
PTPN13-204ENST00000436978 SLC26A6Q9BXS9 759 aa18.22■□□□□ 0.51
PTPN13-204ENST00000436978 ZNF219Q9P2Y4 722 aaPredicted RBP18.22■□□□□ 0.51
PTPN13-204ENST00000436978 TBCAO75347 108 aaKnown RBP18.22■□□□□ 0.51
PTPN13-204ENST00000436978 IFI16Q16666 785 aaKnown RBP18.22■□□□□ 0.51
PTPN13-204ENST00000436978 POTEB2H3BUK9 544 aa18.22■□□□□ 0.51
PTPN13-204ENST00000436978 IL15P40933 162 aaPredicted RBP18.22■□□□□ 0.51
PTPN13-204ENST00000436978 UBE2HP62256 183 aa18.22■□□□□ 0.51
PTPN13-204ENST00000436978 HOOK3Q86VS8 718 aa18.22■□□□□ 0.51
PTPN13-204ENST00000436978 B4DLN1 442 aa18.21■□□□□ 0.51
PTPN13-204ENST00000436978 C11orf95C9JLR9 678 aaPredicted RBP18.21■□□□□ 0.51
PTPN13-204ENST00000436978 MRPL12P52815 198 aaKnown RBP18.21■□□□□ 0.51
PTPN13-204ENST00000436978 C20orf194Q5TEA3 1177 aa18.21■□□□□ 0.51
PTPN13-204ENST00000436978 INCENPQ9NQS7 918 aa18.21■□□□□ 0.51
PTPN13-204ENST00000436978 DDB1Q16531 1140 aa18.21■□□□□ 0.51
PTPN13-204ENST00000436978 CCDC40Q4G0X9 1142 aa18.21■□□□□ 0.51
PTPN13-204ENST00000436978 PAFAH1B1P43034 410 aa18.21■□□□□ 0.51
PTPN13-204ENST00000436978 FAM83GA6ND36 823 aa18.21■□□□□ 0.51
PTPN13-204ENST00000436978 ATP2B3Q16720 1220 aa18.21■□□□□ 0.51
PTPN13-204ENST00000436978 CCDC144CPQ8IYA2 1237 aa18.21■□□□□ 0.5
PTPN13-204ENST00000436978 EHBP1Q8NDI1 1231 aa18.21■□□□□ 0.5
PTPN13-204ENST00000436978 RBM27Q9P2N5 1060 aaKnown RBP18.21■□□□□ 0.5
PTPN13-204ENST00000436978 SHROOM2Q13796 1616 aa18.21■□□□□ 0.5
PTPN13-204ENST00000436978 MCMDC2Q4G0Z9 681 aa18.2■□□□□ 0.5
PTPN13-204ENST00000436978 DYDC1Q8WWB3 177 aa18.2■□□□□ 0.5
PTPN13-204ENST00000436978 KSR2Q6VAB6 950 aa18.2■□□□□ 0.5
PTPN13-204ENST00000436978 CHRNA2Q15822 529 aa18.2■□□□□ 0.5
PTPN13-204ENST00000436978 TDRD12Q587J7 1177 aaKnown RBP18.2■□□□□ 0.5
PTPN13-204ENST00000436978 GIGYF2Q6Y7W6 1299 aaKnown RBP18.2■□□□□ 0.5
PTPN13-204ENST00000436978 ZSCAN30Q86W11 494 aa18.2■□□□□ 0.5
PTPN13-204ENST00000436978 CTNNA2P26232 953 aa18.2■□□□□ 0.5
PTPN13-204ENST00000436978 TBC1D5Q92609 795 aa18.2■□□□□ 0.5
PTPN13-204ENST00000436978 ORC3Q9UBD5 711 aaPredicted RBP18.2■□□□□ 0.5
PTPN13-204ENST00000436978 CCDC174Q6PII3 467 aa18.19■□□□□ 0.5
PTPN13-204ENST00000436978 TMCO3Q6UWJ1 677 aa18.19■□□□□ 0.5
PTPN13-204ENST00000436978 MAPKBP1O60336 1514 aa18.19■□□□□ 0.5
PTPN13-204ENST00000436978 XAGE3Q8WTP9 111 aa18.19■□□□□ 0.5
PTPN13-204ENST00000436978 CTAGE1Q96RT6 745 aa18.19■□□□□ 0.5
PTPN13-204ENST00000436978 ZBTB43O43298 467 aa18.19■□□□□ 0.5
PTPN13-204ENST00000436978 USP8P40818 1118 aa18.19■□□□□ 0.5
PTPN13-204ENST00000436978 TTC12Q9H892 705 aaPredicted RBP18.19■□□□□ 0.5
PTPN13-204ENST00000436978 RBM25P49756 843 aaKnown RBP18.19■□□□□ 0.5
PTPN13-204ENST00000436978 CCDC102BQ68D86 513 aa18.19■□□□□ 0.5
PTPN13-204ENST00000436978 RHPN1Q8TCX5 695 aa18.19■□□□□ 0.5
PTPN13-204ENST00000436978 TTC41PQ6P2S7 1318 aa18.19■□□□□ 0.5
PTPN13-204ENST00000436978 CALM1P0DP23 149 aa18.19■□□□□ 0.5
PTPN13-204ENST00000436978 CALM2P0DP24 149 aa18.19■□□□□ 0.5
PTPN13-204ENST00000436978 CALM3P0DP25 149 aa18.19■□□□□ 0.5
PTPN13-204ENST00000436978 CYP7A1P22680 504 aa18.19■□□□□ 0.5
PTPN13-204ENST00000436978 RTN1Q16799 776 aa18.19■□□□□ 0.5
PTPN13-204ENST00000436978 DDX12PQ92771 950 aa18.19■□□□□ 0.5
PTPN13-204ENST00000436978 VAT1LQ9HCJ6 419 aa18.19■□□□□ 0.5
PTPN13-204ENST00000436978 SLC4A4Q9Y6R1 1079 aa18.19■□□□□ 0.5
PTPN13-204ENST00000436978 SETD1BQ9UPS6 1966 aaKnown RBP18.19■□□□□ 0.5
PTPN13-204ENST00000436978 POLR3AO14802 1390 aaPredicted RBP18.18■□□□□ 0.5
PTPN13-204ENST00000436978 CCDC97Q96F63 343 aaPredicted RBP18.18■□□□□ 0.5
PTPN13-204ENST00000436978 BICD1Q96G01 975 aa18.18■□□□□ 0.5
PTPN13-204ENST00000436978 NAA16Q6N069 864 aaPredicted RBP18.18■□□□□ 0.5
PTPN13-204ENST00000436978 KCNG4Q8TDN1 519 aa18.18■□□□□ 0.5
PTPN13-204ENST00000436978 GSTTP1A0A1W2PQM5 241 aa18.18■□□□□ 0.5
PTPN13-204ENST00000436978 UBAP1LF5GYI3 381 aa18.18■□□□□ 0.5
PTPN13-204ENST00000436978 ANKRD2Q9GZV1 360 aa18.18■□□□□ 0.5
PTPN13-204ENST00000436978 YTHDC2Q9H6S0 1430 aaKnown RBP18.18■□□□□ 0.5
PTPN13-204ENST00000436978 ESPNB1AK53 854 aa18.17■□□□□ 0.5
PTPN13-204ENST00000436978 IFFO1Q0D2I5 559 aa18.17■□□□□ 0.5
PTPN13-204ENST00000436978 KIF4BQ2VIQ3 1234 aa18.17■□□□□ 0.5
PTPN13-204ENST00000436978 STAT6P42226 847 aa18.17■□□□□ 0.5
PTPN13-204ENST00000436978 CTNNBL1Q8WYA6 563 aaPredicted RBP18.17■□□□□ 0.5
PTPN13-204ENST00000436978 STX8Q9UNK0 236 aa18.17■□□□□ 0.5
PTPN13-204ENST00000436978 STAMBPO95630 424 aa18.17■□□□□ 0.5
PTPN13-204ENST00000436978 BRPF3Q9ULD4 1205 aa18.17■□□□□ 0.5
PTPN13-204ENST00000436978 NIP7Q9Y221 180 aaKnown RBP eCLIP18.17■□□□□ 0.5
PTPN13-204ENST00000436978 RTCBQ9Y3I0 505 aaKnown RBP18.17■□□□□ 0.5
PTPN13-204ENST00000436978 UHRF1BP1Q6BDS2 1440 aa18.17■□□□□ 0.5
PTPN13-204ENST00000436978 MAP2K1Q02750 393 aaPredicted RBP18.17■□□□□ 0.5
PTPN13-204ENST00000436978 GOPCQ9HD26 462 aa18.17■□□□□ 0.5
PTPN13-204ENST00000436978 MAGEB6P1A0A0J9YX57 407 aa18.17■□□□□ 0.5
PTPN13-204ENST00000436978 HAND2P61296 217 aa18.17■□□□□ 0.5
PTPN13-204ENST00000436978 MYCNP04198 464 aaPredicted RBP18.17■□□□□ 0.5
PTPN13-204ENST00000436978 GOLGA6L10A0A0M3HER8 536 aa18.16■□□□□ 0.5
PTPN13-204ENST00000436978 C8orf37Q96NL8 207 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms