RNA–Protein interactions for RNA: ENST00000436712.2

GAPVD1-209, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-209ENST00000436712 TBC1D8BQ0IIM8 1120 aa9.33□□□□□ -0.92
GAPVD1-209ENST00000436712 WWC2Q6AWC2 1192 aa9.33□□□□□ -0.92
GAPVD1-209ENST00000436712 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.33□□□□□ -0.92
GAPVD1-209ENST00000436712 NSD2O96028 1365 aa9.33□□□□□ -0.92
GAPVD1-209ENST00000436712 MAP2P11137 1827 aaKnown RBP9.33□□□□□ -0.92
GAPVD1-209ENST00000436712 U2SURPO15042 1029 aaKnown RBP9.33□□□□□ -0.92
GAPVD1-209ENST00000436712 EIF3JO75822 258 aaKnown RBP9.33□□□□□ -0.92
GAPVD1-209ENST00000436712 SLU7O95391 586 aaKnown RBP9.33□□□□□ -0.92
GAPVD1-209ENST00000436712 RLBP1P12271 317 aa9.33□□□□□ -0.92
GAPVD1-209ENST00000436712 ATF3P18847 181 aa9.33□□□□□ -0.92
GAPVD1-209ENST00000436712 RWDD2BP57060 319 aa9.33□□□□□ -0.92
GAPVD1-209ENST00000436712 TADA2BQ86TJ2 420 aa9.33□□□□□ -0.92
GAPVD1-209ENST00000436712 KDM4CQ9H3R0 1056 aa9.33□□□□□ -0.92
GAPVD1-209ENST00000436712 SLC24A3Q9HC58 644 aa9.33□□□□□ -0.92
GAPVD1-209ENST00000436712 IFT57Q9NWB7 429 aa9.33□□□□□ -0.92
GAPVD1-209ENST00000436712 PCDHB15Q9Y5E8 787 aa9.33□□□□□ -0.92
GAPVD1-209ENST00000436712 XIRP1Q702N8 1843 aaKnown RBP9.33□□□□□ -0.92
GAPVD1-209ENST00000436712 ANKARQ7Z5J8 1434 aa9.32□□□□□ -0.92
GAPVD1-209ENST00000436712 ELF1P32519 619 aa9.32□□□□□ -0.92
GAPVD1-209ENST00000436712 GRIK3Q13003 919 aa9.32□□□□□ -0.92
GAPVD1-209ENST00000436712 SMC3Q9UQE7 1217 aa9.32□□□□□ -0.92
GAPVD1-209ENST00000436712 SHPRHQ149N8 1683 aa9.32□□□□□ -0.92
GAPVD1-209ENST00000436712 A0A087WUV0 522 aaPredicted RBP9.32□□□□□ -0.92
GAPVD1-209ENST00000436712 MYBL2P10244 700 aa9.32□□□□□ -0.92
GAPVD1-209ENST00000436712 OAS2P29728 719 aaKnown RBP9.32□□□□□ -0.92
GAPVD1-209ENST00000436712 LMAN1P49257 510 aa9.32□□□□□ -0.92
GAPVD1-209ENST00000436712 PSME1Q06323 249 aa9.32□□□□□ -0.92
GAPVD1-209ENST00000436712 GBP6Q6ZN66 633 aa9.32□□□□□ -0.92
GAPVD1-209ENST00000436712 C19orf44Q9H6X5 657 aa9.32□□□□□ -0.92
GAPVD1-209ENST00000436712 CPSF2Q9P2I0 782 aaKnown RBP9.32□□□□□ -0.92
GAPVD1-209ENST00000436712 MKRN1Q9UHC7 482 aaKnown RBP9.32□□□□□ -0.92
GAPVD1-209ENST00000436712 GCFC2P16383 781 aaKnown RBP9.31□□□□□ -0.92
GAPVD1-209ENST00000436712 PKP1Q13835 747 aa9.31□□□□□ -0.92
GAPVD1-209ENST00000436712 NEDD9Q14511 834 aa9.31□□□□□ -0.92
GAPVD1-209ENST00000436712 TTLL5Q6EMB2 1281 aa9.31□□□□□ -0.92
GAPVD1-209ENST00000436712 WDR63Q8IWG1 891 aa9.31□□□□□ -0.92
GAPVD1-209ENST00000436712 ZNF483Q8TF39 744 aaPredicted RBP9.31□□□□□ -0.92
GAPVD1-209ENST00000436712 ARHGEF1Q92888 912 aaKnown RBP9.31□□□□□ -0.92
GAPVD1-209ENST00000436712 TRIM6Q9C030 488 aaPredicted RBP9.31□□□□□ -0.92
GAPVD1-209ENST00000436712 ARGLU1Q9NWB6 273 aaPredicted RBP9.31□□□□□ -0.92
GAPVD1-209ENST00000436712 PIK3C2AO00443 1686 aa9.31□□□□□ -0.92
GAPVD1-209ENST00000436712 NLRP6P59044 892 aa9.31□□□□□ -0.92
GAPVD1-209ENST00000436712 ICA1Q05084 483 aa9.31□□□□□ -0.92
GAPVD1-209ENST00000436712 TPD52L1Q16890 204 aaPredicted RBP9.31□□□□□ -0.92
GAPVD1-209ENST00000436712 TMCO3Q6UWJ1 677 aa9.31□□□□□ -0.92
GAPVD1-209ENST00000436712 TRIM74Q86UV6 250 aa9.31□□□□□ -0.92
GAPVD1-209ENST00000436712 TRIM73Q86UV7 250 aa9.31□□□□□ -0.92
GAPVD1-209ENST00000436712 ABTB2Q8N961 1025 aa9.31□□□□□ -0.92
GAPVD1-209ENST00000436712 CCDC97Q96F63 343 aaPredicted RBP9.31□□□□□ -0.92
GAPVD1-209ENST00000436712 CFAP53Q96M91 514 aa9.31□□□□□ -0.92
GAPVD1-209ENST00000436712 SRRTQ9BXP5 876 aaKnown RBP9.31□□□□□ -0.92
GAPVD1-209ENST00000436712 VEZTQ9HBM0 779 aa9.31□□□□□ -0.92
GAPVD1-209ENST00000436712 ADAM21Q9UKJ8 722 aa9.31□□□□□ -0.92
GAPVD1-209ENST00000436712 FAM163BP0C2L3 166 aa9.3□□□□□ -0.92
GAPVD1-209ENST00000436712 SF3A1Q15459 793 aaKnown RBP9.3□□□□□ -0.92
GAPVD1-209ENST00000436712 NUTM1Q86Y26 1132 aa9.3□□□□□ -0.92
GAPVD1-209ENST00000436712 ERC1Q8IUD2 1116 aa9.3□□□□□ -0.92
GAPVD1-209ENST00000436712 PDRG1Q9NUG6 133 aa9.3□□□□□ -0.92
GAPVD1-209ENST00000436712 C1orf167Q5SNV9 1468 aa9.3□□□□□ -0.92
GAPVD1-209ENST00000436712 LRRC7Q96NW7 1537 aa9.3□□□□□ -0.92
GAPVD1-209ENST00000436712 CCP110O43303 1012 aa9.3□□□□□ -0.92
GAPVD1-209ENST00000436712 PPFIA2O75334 1257 aa9.3□□□□□ -0.92
GAPVD1-209ENST00000436712 ABCD1P33897 745 aa9.3□□□□□ -0.92
GAPVD1-209ENST00000436712 CRYMQ14894 314 aa9.3□□□□□ -0.92
GAPVD1-209ENST00000436712 CCDC27Q2M243 656 aa9.3□□□□□ -0.92
GAPVD1-209ENST00000436712 ANKRD45Q5TZF3 282 aa9.3□□□□□ -0.92
GAPVD1-209ENST00000436712 CCDC30Q5VVM6 783 aa9.3□□□□□ -0.92
GAPVD1-209ENST00000436712 THOC1Q96FV9 657 aaKnown RBP9.3□□□□□ -0.92
GAPVD1-209ENST00000436712 SPATS2LQ9NUQ6 558 aaKnown RBP9.3□□□□□ -0.92
GAPVD1-209ENST00000436712 ZDHHC9Q9Y397 364 aa9.3□□□□□ -0.92
GAPVD1-209ENST00000436712 MSH6P52701 1360 aa9.3□□□□□ -0.92
GAPVD1-209ENST00000436712 ELP1O95163 1332 aa9.29□□□□□ -0.92
GAPVD1-209ENST00000436712 CCDC171Q6TFL3 1326 aa9.29□□□□□ -0.92
GAPVD1-209ENST00000436712 HCLS1P14317 486 aaPredicted RBP9.29□□□□□ -0.92
GAPVD1-209ENST00000436712 PTGS1P23219 599 aa9.29□□□□□ -0.92
GAPVD1-209ENST00000436712 HNRNPH1P31943 449 aaKnown RBP9.29□□□□□ -0.92
GAPVD1-209ENST00000436712 MAGEA8P43361 318 aa9.29□□□□□ -0.92
GAPVD1-209ENST00000436712 HSP90AB4PQ58FF6 505 aa9.29□□□□□ -0.92
GAPVD1-209ENST00000436712 SPC24Q8NBT2 197 aa9.29□□□□□ -0.92
GAPVD1-209ENST00000436712 TSR2Q969E8 191 aaKnown RBP9.29□□□□□ -0.92
GAPVD1-209ENST00000436712 PLEKHF1Q96S99 279 aa9.29□□□□□ -0.92
GAPVD1-209ENST00000436712 ZCCHC17Q9NP64 241 aaKnown RBP9.29□□□□□ -0.92
GAPVD1-209ENST00000436712 SETSIPP0DME0 302 aa9.29□□□□□ -0.92
GAPVD1-209ENST00000436712 CD151P48509 253 aa9.29□□□□□ -0.92
GAPVD1-209ENST00000436712 RPS6KA3P51812 740 aa9.29□□□□□ -0.92
GAPVD1-209ENST00000436712 SMC1AQ14683 1233 aaKnown RBP9.29□□□□□ -0.92
GAPVD1-209ENST00000436712 PDCD2Q16342 344 aaPredicted RBP9.29□□□□□ -0.92
GAPVD1-209ENST00000436712 FAM107BQ9H098 131 aa9.29□□□□□ -0.92
GAPVD1-209ENST00000436712 MCM8Q9UJA3 840 aa9.29□□□□□ -0.92
GAPVD1-209ENST00000436712 MST1RQ04912 1400 aa9.29□□□□□ -0.92
GAPVD1-209ENST00000436712 SOS1Q07889 1333 aaPredicted RBP9.28□□□□□ -0.92
GAPVD1-209ENST00000436712 IQSEC2Q5JU85 1478 aa9.28□□□□□ -0.92
GAPVD1-209ENST00000436712 OVOS2A0A0J9YW53 1432 aa9.28□□□□□ -0.92
GAPVD1-209ENST00000436712 POLD1P28340 1107 aa9.28□□□□□ -0.92
GAPVD1-209ENST00000436712 EIF5P55010 431 aaKnown RBP9.28□□□□□ -0.92
GAPVD1-209ENST00000436712 PSMD2Q13200 908 aa9.28□□□□□ -0.92
GAPVD1-209ENST00000436712 RBBP5Q15291 538 aaKnown RBP9.28□□□□□ -0.92
GAPVD1-209ENST00000436712 SLC5A9Q2M3M2 681 aa9.28□□□□□ -0.92
GAPVD1-209ENST00000436712 OVOS2Q6IE36 1432 aa9.28□□□□□ -0.92
GAPVD1-209ENST00000436712 SSH2Q76I76 1423 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms