RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 TNFRSF10AO00220 468 aa11.73□□□□□ -0.53
NIF3L1-208ENST00000436412 HSP90AB2PQ58FF8 381 aa11.73□□□□□ -0.53
NIF3L1-208ENST00000436412 WWC3Q9ULE0 1092 aa11.73□□□□□ -0.53
NIF3L1-208ENST00000436412 TOGARAM1Q9Y4F4 1720 aa11.73□□□□□ -0.53
NIF3L1-208ENST00000436412 DXOO77932 396 aaKnown RBP11.72□□□□□ -0.53
NIF3L1-208ENST00000436412 MMP10P09238 476 aa11.72□□□□□ -0.53
NIF3L1-208ENST00000436412 NLGN1Q8N2Q7 840 aa11.72□□□□□ -0.53
NIF3L1-208ENST00000436412 LINC00116Q8NCU8 138 aa11.72□□□□□ -0.53
NIF3L1-208ENST00000436412 GGNBP2Q9H3C7 697 aa11.72□□□□□ -0.53
NIF3L1-208ENST00000436412 SPG7Q9UQ90 795 aa11.72□□□□□ -0.53
NIF3L1-208ENST00000436412 MAP2P11137 1827 aaKnown RBP11.72□□□□□ -0.53
NIF3L1-208ENST00000436412 ST20-MTHFSA0A0A6YYL1 179 aa11.71□□□□□ -0.53
NIF3L1-208ENST00000436412 TMOD3Q9NYL9 352 aa11.71□□□□□ -0.53
NIF3L1-208ENST00000436412 KIF13BQ9NQT8 1826 aa11.71□□□□□ -0.54
NIF3L1-208ENST00000436412 PXDNLA1KZ92 1463 aa11.7□□□□□ -0.54
NIF3L1-208ENST00000436412 FSTL1Q12841 308 aa11.7□□□□□ -0.54
NIF3L1-208ENST00000436412 ARHGAP27Q6ZUM4 889 aa11.7□□□□□ -0.54
NIF3L1-208ENST00000436412 SYMPKQ92797 1274 aaKnown RBP11.7□□□□□ -0.54
NIF3L1-208ENST00000436412 PCDHGC3Q9UN70 934 aa11.7□□□□□ -0.54
NIF3L1-208ENST00000436412 BCS1LQ9Y276 419 aa11.7□□□□□ -0.54
NIF3L1-208ENST00000436412 NCAPD2Q15021 1401 aa11.69□□□□□ -0.54
NIF3L1-208ENST00000436412 PKD1L3Q7Z443 1732 aa11.69□□□□□ -0.54
NIF3L1-208ENST00000436412 TMF1P82094 1093 aa11.69□□□□□ -0.54
NIF3L1-208ENST00000436412 TTLL12Q14166 644 aaPredicted RBP11.69□□□□□ -0.54
NIF3L1-208ENST00000436412 TRAPPC3LQ5T215 181 aa11.69□□□□□ -0.54
NIF3L1-208ENST00000436412 GIGYF2Q6Y7W6 1299 aaKnown RBP11.69□□□□□ -0.54
NIF3L1-208ENST00000436412 SMIM5Q71RC9 77 aa11.69□□□□□ -0.54
NIF3L1-208ENST00000436412 NUTM1Q86Y26 1132 aa11.69□□□□□ -0.54
NIF3L1-208ENST00000436412 JMYQ8N9B5 988 aa11.69□□□□□ -0.54
NIF3L1-208ENST00000436412 SPIRE2Q8WWL2 714 aa11.69□□□□□ -0.54
NIF3L1-208ENST00000436412 KLRG1Q96E93 195 aa11.69□□□□□ -0.54
NIF3L1-208ENST00000436412 CCDC87Q9NVE4 849 aa11.69□□□□□ -0.54
NIF3L1-208ENST00000436412 RTCBQ9Y3I0 505 aaKnown RBP11.69□□□□□ -0.54
NIF3L1-208ENST00000436412 TONSLQ96HA7 1378 aa11.68□□□□□ -0.54
NIF3L1-208ENST00000436412 PLEKHG2Q9H7P9 1386 aa11.68□□□□□ -0.54
NIF3L1-208ENST00000436412 A0A0G2JLW4 131 aa11.68□□□□□ -0.54
NIF3L1-208ENST00000436412 TRIM66O15016 1216 aa11.68□□□□□ -0.54
NIF3L1-208ENST00000436412 DGAT1O75907 488 aa11.68□□□□□ -0.54
NIF3L1-208ENST00000436412 ITPK1Q13572 414 aa11.68□□□□□ -0.54
NIF3L1-208ENST00000436412 RC3H1Q5TC82 1133 aaKnown RBP11.68□□□□□ -0.54
NIF3L1-208ENST00000436412 C16orf71Q8IYS4 520 aaPredicted RBP11.68□□□□□ -0.54
NIF3L1-208ENST00000436412 IFNL2Q8IZJ0 200 aa11.68□□□□□ -0.54
NIF3L1-208ENST00000436412 NMRK2Q9NPI5 230 aa11.68□□□□□ -0.54
NIF3L1-208ENST00000436412 ASAP1Q9ULH1 1129 aa11.68□□□□□ -0.54
NIF3L1-208ENST00000436412 C10orf71Q711Q0 1435 aa11.68□□□□□ -0.54
NIF3L1-208ENST00000436412 FOXC1Q12948 553 aa11.67□□□□□ -0.54
NIF3L1-208ENST00000436412 CDCA8Q53HL2 280 aa11.67□□□□□ -0.54
NIF3L1-208ENST00000436412 WDR90Q96KV7 1748 aa11.66□□□□□ -0.54
NIF3L1-208ENST00000436412 KDM2BQ8NHM5 1336 aa11.66□□□□□ -0.54
NIF3L1-208ENST00000436412 CD2BP2O95400 341 aaKnown RBP11.66□□□□□ -0.54
NIF3L1-208ENST00000436412 DPEP1P16444 411 aa11.66□□□□□ -0.54
NIF3L1-208ENST00000436412 C9orf131Q5VYM1 1079 aa11.66□□□□□ -0.54
NIF3L1-208ENST00000436412 PARP9Q8IXQ6 854 aa11.66□□□□□ -0.54
NIF3L1-208ENST00000436412 ATG3Q9NT62 314 aa11.66□□□□□ -0.54
NIF3L1-208ENST00000436412 PARP3Q9Y6F1 533 aa11.66□□□□□ -0.54
NIF3L1-208ENST00000436412 N4BP2Q86UW6 1770 aaPredicted RBP11.66□□□□□ -0.54
NIF3L1-208ENST00000436412 KIAA1551Q9HCM1 1747 aa11.66□□□□□ -0.54
NIF3L1-208ENST00000436412 WASHC2AQ641Q2 1341 aa11.65□□□□□ -0.54
NIF3L1-208ENST00000436412 PHKG2P15735 406 aa11.65□□□□□ -0.54
NIF3L1-208ENST00000436412 RFC4P35249 363 aa11.65□□□□□ -0.54
NIF3L1-208ENST00000436412 PIM2Q9P1W9 311 aa11.65□□□□□ -0.54
NIF3L1-208ENST00000436412 EMILIN1Q9Y6C2 1016 aa11.65□□□□□ -0.54
NIF3L1-208ENST00000436412 MOXD2PA6NHM9 499 aa11.64□□□□□ -0.55
NIF3L1-208ENST00000436412 ERVV-2B6SEH9 535 aa11.64□□□□□ -0.55
NIF3L1-208ENST00000436412 RPS6KA4O75676 772 aa11.64□□□□□ -0.55
NIF3L1-208ENST00000436412 FDX1P10109 184 aa11.64□□□□□ -0.55
NIF3L1-208ENST00000436412 GYS1P13807 737 aa11.64□□□□□ -0.55
NIF3L1-208ENST00000436412 NDUFV2P19404 249 aa11.64□□□□□ -0.55
NIF3L1-208ENST00000436412 PKDCCQ504Y2 493 aa11.64□□□□□ -0.55
NIF3L1-208ENST00000436412 COL13A1Q5TAT6 717 aaPredicted RBP11.64□□□□□ -0.55
NIF3L1-208ENST00000436412 TOR4AQ9NXH8 423 aa11.64□□□□□ -0.55
NIF3L1-208ENST00000436412 KIF20BQ96Q89 1820 aa11.64□□□□□ -0.55
NIF3L1-208ENST00000436412 ARFGEF1Q9Y6D6 1849 aa11.64□□□□□ -0.55
NIF3L1-208ENST00000436412 KDRP35968 1356 aa11.64□□□□□ -0.55
NIF3L1-208ENST00000436412 BRCA1P38398 1863 aaKnown RBP11.63□□□□□ -0.55
NIF3L1-208ENST00000436412 CNTNAP4Q9C0A0 1308 aa11.63□□□□□ -0.55
NIF3L1-208ENST00000436412 ZNF831Q5JPB2 1677 aa11.63□□□□□ -0.55
NIF3L1-208ENST00000436412 PPM1GO15355 546 aaPredicted RBP11.63□□□□□ -0.55
NIF3L1-208ENST00000436412 KCNA3P22001 575 aa11.63□□□□□ -0.55
NIF3L1-208ENST00000436412 DALRD3Q5D0E6 543 aaKnown RBP11.63□□□□□ -0.55
NIF3L1-208ENST00000436412 RETREG3Q86VR2 466 aa11.63□□□□□ -0.55
NIF3L1-208ENST00000436412 DCAF5Q96JK2 942 aa11.63□□□□□ -0.55
NIF3L1-208ENST00000436412 C4AP0C0L4 1744 aa11.63□□□□□ -0.55
NIF3L1-208ENST00000436412 ZC3H4Q9UPT8 1303 aaKnown RBP11.62□□□□□ -0.55
NIF3L1-208ENST00000436412 FAM187AA6NFU0 413 aa11.62□□□□□ -0.55
NIF3L1-208ENST00000436412 HSP90AB1P08238 724 aaKnown RBP11.62□□□□□ -0.55
NIF3L1-208ENST00000436412 MS4A1P11836 297 aa11.62□□□□□ -0.55
NIF3L1-208ENST00000436412 JUNDP17535 347 aa11.62□□□□□ -0.55
NIF3L1-208ENST00000436412 PRELPP51888 382 aa11.62□□□□□ -0.55
NIF3L1-208ENST00000436412 TRIM32Q13049 653 aa11.62□□□□□ -0.55
NIF3L1-208ENST00000436412 TNS4Q8IZW8 715 aa11.62□□□□□ -0.55
NIF3L1-208ENST00000436412 SMC1BQ8NDV3 1235 aa11.62□□□□□ -0.55
NIF3L1-208ENST00000436412 ZBTB24O43167 697 aaPredicted RBP11.61□□□□□ -0.55
NIF3L1-208ENST00000436412 SLC4A9Q96Q91 983 aa11.61□□□□□ -0.55
NIF3L1-208ENST00000436412 BEGAINQ9BUH8 593 aa11.61□□□□□ -0.55
NIF3L1-208ENST00000436412 RNF181Q9P0P0 153 aa11.61□□□□□ -0.55
NIF3L1-208ENST00000436412 HTRA3P83110 453 aa11.6□□□□□ -0.55
NIF3L1-208ENST00000436412 CARD14Q9BXL6 1004 aa11.6□□□□□ -0.55
NIF3L1-208ENST00000436412 RRAGCQ9HB90 399 aa11.6□□□□□ -0.55
NIF3L1-208ENST00000436412 ANKRD26Q9UPS8 1709 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms