RNA–Protein interactions for RNA: ENST00000435539.1

AL441943.1-201, humanhuman

TSL 3 BASIC

Gene AL441943.1, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL441943.1-201ENST00000435539 PCDHB3Q9Y5E6 796 aa10.75□□□□□ -0.69
AL441943.1-201ENST00000435539 NRAPQ86VF7 1730 aa10.75□□□□□ -0.69
AL441943.1-201ENST00000435539 CT47B1P0C2W7 299 aaPredicted RBP10.74□□□□□ -0.69
AL441943.1-201ENST00000435539 HOMEZQ8IX15 550 aa10.74□□□□□ -0.69
AL441943.1-201ENST00000435539 TBC1D2BQ9UPU7 963 aa10.74□□□□□ -0.69
AL441943.1-201ENST00000435539 SOS1Q07889 1333 aaPredicted RBP10.74□□□□□ -0.69
AL441943.1-201ENST00000435539 PARP4Q9UKK3 1724 aaKnown RBP10.73□□□□□ -0.69
AL441943.1-201ENST00000435539 RNMTO43148 476 aaKnown RBP10.73□□□□□ -0.69
AL441943.1-201ENST00000435539 RRP7AQ9Y3A4 280 aaKnown RBP10.73□□□□□ -0.69
AL441943.1-201ENST00000435539 SALL2Q9Y467 1007 aaPredicted RBP10.73□□□□□ -0.69
AL441943.1-201ENST00000435539 NDUFB9Q9Y6M9 179 aa10.73□□□□□ -0.69
AL441943.1-201ENST00000435539 ZNF521Q96K83 1311 aa10.73□□□□□ -0.69
AL441943.1-201ENST00000435539 MEGF6O75095 1541 aa10.73□□□□□ -0.69
AL441943.1-201ENST00000435539 CYP27B1O15528 508 aa10.72□□□□□ -0.69
AL441943.1-201ENST00000435539 NR1I2O75469 434 aa10.72□□□□□ -0.69
AL441943.1-201ENST00000435539 CABP4P57796 275 aa10.72□□□□□ -0.69
AL441943.1-201ENST00000435539 SEPT12Q8IYM1 358 aa10.72□□□□□ -0.69
AL441943.1-201ENST00000435539 LRRN4Q8WUT4 740 aa10.72□□□□□ -0.69
AL441943.1-201ENST00000435539 ZNF428Q96B54 188 aa10.72□□□□□ -0.69
AL441943.1-201ENST00000435539 WBP1LQ9NX94 342 aa10.72□□□□□ -0.69
AL441943.1-201ENST00000435539 ZNF330Q9Y3S2 320 aaPredicted RBP10.72□□□□□ -0.69
AL441943.1-201ENST00000435539 CEMIPQ8WUJ3 1361 aa10.72□□□□□ -0.69
AL441943.1-201ENST00000435539 TNS2Q63HR2 1409 aa10.72□□□□□ -0.69
AL441943.1-201ENST00000435539 BCL9O00512 1426 aa10.71□□□□□ -0.69
AL441943.1-201ENST00000435539 SLFN5Q08AF3 891 aa10.71□□□□□ -0.69
AL441943.1-201ENST00000435539 MPRIPQ6WCQ1 1025 aa10.71□□□□□ -0.69
AL441943.1-201ENST00000435539 RNF19BQ6ZMZ0 732 aa10.71□□□□□ -0.69
AL441943.1-201ENST00000435539 FAM196AQ6ZSG2 479 aa10.71□□□□□ -0.69
AL441943.1-201ENST00000435539 IL17REQ8NFR9 667 aa10.71□□□□□ -0.69
AL441943.1-201ENST00000435539 SLC52A2Q9HAB3 445 aa10.71□□□□□ -0.69
AL441943.1-201ENST00000435539 HMX1Q9NP08 348 aaPredicted RBP10.71□□□□□ -0.69
AL441943.1-201ENST00000435539 BTBD11A6QL63 1104 aa10.7□□□□□ -0.7
AL441943.1-201ENST00000435539 CHL1O00533 1208 aa10.7□□□□□ -0.7
AL441943.1-201ENST00000435539 BLOC1S3Q6QNY0 202 aa10.7□□□□□ -0.7
AL441943.1-201ENST00000435539 THSD4Q6ZMP0 1018 aa10.7□□□□□ -0.7
AL441943.1-201ENST00000435539 MCM10Q7L590 875 aa10.7□□□□□ -0.7
AL441943.1-201ENST00000435539 KRT27Q7Z3Y8 459 aa10.7□□□□□ -0.7
AL441943.1-201ENST00000435539 KCTD12Q96CX2 325 aaKnown RBP10.7□□□□□ -0.7
AL441943.1-201ENST00000435539 TMOD3Q9NYL9 352 aa10.7□□□□□ -0.7
AL441943.1-201ENST00000435539 ZNF853P0CG23 659 aa10.69□□□□□ -0.7
AL441943.1-201ENST00000435539 TRMT2AQ8IZ69 625 aaKnown RBP10.69□□□□□ -0.7
AL441943.1-201ENST00000435539 TTC5Q8N0Z6 440 aa10.69□□□□□ -0.7
AL441943.1-201ENST00000435539 SMARCC1Q92922 1105 aaPredicted RBP10.69□□□□□ -0.7
AL441943.1-201ENST00000435539 TSPYL4Q9UJ04 414 aa10.69□□□□□ -0.7
AL441943.1-201ENST00000435539 RGPD2P0DJD1 1756 aa10.69□□□□□ -0.7
AL441943.1-201ENST00000435539 PKD1L3Q7Z443 1732 aa10.69□□□□□ -0.7
AL441943.1-201ENST00000435539 FMNL1O95466 1100 aaPredicted RBP10.68□□□□□ -0.7
AL441943.1-201ENST00000435539 HOXB7P09629 217 aa10.68□□□□□ -0.7
AL441943.1-201ENST00000435539 SCUBE3Q8IX30 993 aa10.68□□□□□ -0.7
AL441943.1-201ENST00000435539 CCDC82Q8N4S0 544 aa10.68□□□□□ -0.7
AL441943.1-201ENST00000435539 MARCH10Q8NA82 808 aaPredicted RBP10.68□□□□□ -0.7
AL441943.1-201ENST00000435539 NFATC2IPQ8NCF5 419 aa10.68□□□□□ -0.7
AL441943.1-201ENST00000435539 USB1Q9BQ65 265 aaKnown RBP10.68□□□□□ -0.7
AL441943.1-201ENST00000435539 TEX13AQ9BXU3 409 aaPredicted RBP10.68□□□□□ -0.7
AL441943.1-201ENST00000435539 LGR6Q9HBX8 967 aa10.68□□□□□ -0.7
AL441943.1-201ENST00000435539 LAS1LQ9Y4W2 734 aaKnown RBP10.68□□□□□ -0.7
AL441943.1-201ENST00000435539 DCTN1Q14203 1278 aa10.67□□□□□ -0.7
AL441943.1-201ENST00000435539 TRIM34Q9BYJ4 488 aa10.67□□□□□ -0.7
AL441943.1-201ENST00000435539 GLI3P10071 1580 aa10.66□□□□□ -0.7
AL441943.1-201ENST00000435539 DUSP27Q5VZP5 1158 aa10.66□□□□□ -0.7
AL441943.1-201ENST00000435539 DESI1Q6ICB0 168 aa10.66□□□□□ -0.7
AL441943.1-201ENST00000435539 ZNF790Q6PG37 636 aa10.66□□□□□ -0.7
AL441943.1-201ENST00000435539 BRICD5Q6PL45 260 aa10.66□□□□□ -0.7
AL441943.1-201ENST00000435539 FMNL2Q96PY5 1086 aa10.66□□□□□ -0.7
AL441943.1-201ENST00000435539 RGS17Q9UGC6 210 aaPredicted RBP10.66□□□□□ -0.7
AL441943.1-201ENST00000435539 CCDC97Q96F63 343 aaPredicted RBP10.65□□□□□ -0.7
AL441943.1-201ENST00000435539 MBIPQ9NS73 344 aa10.65□□□□□ -0.7
AL441943.1-201ENST00000435539 THSD7AQ9UPZ6 1657 aa10.64□□□□□ -0.71
AL441943.1-201ENST00000435539 COPS2P61201 443 aa10.64□□□□□ -0.71
AL441943.1-201ENST00000435539 POTEAQ6S8J7 498 aa10.64□□□□□ -0.71
AL441943.1-201ENST00000435539 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.64□□□□□ -0.71
AL441943.1-201ENST00000435539 SYTL4Q96C24 671 aaPredicted RBP10.64□□□□□ -0.71
AL441943.1-201ENST00000435539 KDM6AO15550 1401 aaPredicted RBP10.64□□□□□ -0.71
AL441943.1-201ENST00000435539 FANCIQ9NVI1 1328 aa10.63□□□□□ -0.71
AL441943.1-201ENST00000435539 SNRPA1P09661 255 aaKnown RBP10.63□□□□□ -0.71
AL441943.1-201ENST00000435539 ALDH1L2Q3SY69 923 aa10.63□□□□□ -0.71
AL441943.1-201ENST00000435539 POTEGQ6S5H5 508 aa10.63□□□□□ -0.71
AL441943.1-201ENST00000435539 CCDC125Q86Z20 511 aa10.63□□□□□ -0.71
AL441943.1-201ENST00000435539 CDAN1Q8IWY9 1227 aa10.63□□□□□ -0.71
AL441943.1-201ENST00000435539 PIGBQ92521 554 aa10.63□□□□□ -0.71
AL441943.1-201ENST00000435539 THAP11Q96EK4 314 aa10.63□□□□□ -0.71
AL441943.1-201ENST00000435539 THUMPD2Q9BTF0 503 aaKnown RBP10.63□□□□□ -0.71
AL441943.1-201ENST00000435539 WNK3Q9BYP7 1800 aa10.63□□□□□ -0.71
AL441943.1-201ENST00000435539 MRC1P22897 1456 aa10.62□□□□□ -0.71
AL441943.1-201ENST00000435539 EIF4A1P60842 406 aaKnown RBP10.62□□□□□ -0.71
AL441943.1-201ENST00000435539 NR6A1Q15406 480 aa10.62□□□□□ -0.71
AL441943.1-201ENST00000435539 TWISTNBQ3B726 338 aaPredicted RBP10.62□□□□□ -0.71
AL441943.1-201ENST00000435539 CCDC30Q5VVM6 783 aa10.62□□□□□ -0.71
AL441943.1-201ENST00000435539 NYAP1Q6ZVC0 841 aa10.62□□□□□ -0.71
AL441943.1-201ENST00000435539 EPS8L1Q8TE68 723 aa10.62□□□□□ -0.71
AL441943.1-201ENST00000435539 PLSCR2Q9NRY7 297 aa10.62□□□□□ -0.71
AL441943.1-201ENST00000435539 ADAMTS7Q9UKP4 1686 aa10.62□□□□□ -0.71
AL441943.1-201ENST00000435539 LRRC37A3O60309 1634 aa10.62□□□□□ -0.71
AL441943.1-201ENST00000435539 STARD3NLO95772 234 aa10.61□□□□□ -0.71
AL441943.1-201ENST00000435539 JUNDP17535 347 aa10.61□□□□□ -0.71
AL441943.1-201ENST00000435539 EXOSC9Q06265 439 aaKnown RBP10.61□□□□□ -0.71
AL441943.1-201ENST00000435539 SF3B2Q13435 895 aaKnown RBP10.61□□□□□ -0.71
AL441943.1-201ENST00000435539 LYPD8Q6UX82 237 aa10.61□□□□□ -0.71
AL441943.1-201ENST00000435539 PNMA1Q8ND90 353 aa10.61□□□□□ -0.71
AL441943.1-201ENST00000435539 STK31Q9BXU1 1019 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms