RNA–Protein interactions for RNA: ENST00000434452.5

DSC3-202, Transcript of desmocollin 3, humanhuman

TSL 5 BASIC

Gene DSC3, Length 6,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSC3-202ENST00000434452 CHST3Q7LGC8 479 aa10.56□□□□□ -0.72
DSC3-202ENST00000434452 DACT3Q96B18 629 aaPredicted RBP10.56□□□□□ -0.72
DSC3-202ENST00000434452 MAATS1Q7Z4T9 603 aa10.56□□□□□ -0.72
DSC3-202ENST00000434452 CCDC77Q9BR77 488 aa10.56□□□□□ -0.72
DSC3-202ENST00000434452 ZNF692Q9BU19 519 aaPredicted RBP10.56□□□□□ -0.72
DSC3-202ENST00000434452 RRS1Q15050 365 aaKnown RBP10.55□□□□□ -0.72
DSC3-202ENST00000434452 MICAL1Q8TDZ2 1067 aa10.55□□□□□ -0.72
DSC3-202ENST00000434452 LMCD1Q9NZU5 365 aa10.55□□□□□ -0.72
DSC3-202ENST00000434452 SPDYE3A6NKU9 549 aa10.55□□□□□ -0.72
DSC3-202ENST00000434452 FBXW4P57775 412 aa10.55□□□□□ -0.72
DSC3-202ENST00000434452 BOLA2Q9H3K6 86 aa10.55□□□□□ -0.72
DSC3-202ENST00000434452 MBD3O95983 291 aa10.55□□□□□ -0.72
DSC3-202ENST00000434452 LDHAL6AQ6ZMR3 332 aa10.55□□□□□ -0.72
DSC3-202ENST00000434452 ABT1Q9ULW3 272 aaKnown RBP10.55□□□□□ -0.72
DSC3-202ENST00000434452 PPP6R1Q9UPN7 881 aa10.55□□□□□ -0.72
DSC3-202ENST00000434452 OATP04181 439 aa10.55□□□□□ -0.72
DSC3-202ENST00000434452 ARHGAP27Q6ZUM4 889 aa10.55□□□□□ -0.72
DSC3-202ENST00000434452 RPGRIP1LQ68CZ1 1315 aa10.55□□□□□ -0.72
DSC3-202ENST00000434452 TTC12Q9H892 705 aaPredicted RBP10.55□□□□□ -0.72
DSC3-202ENST00000434452 BANK1Q8NDB2 785 aa10.55□□□□□ -0.72
DSC3-202ENST00000434452 NLRP3Q96P20 1036 aa10.55□□□□□ -0.72
DSC3-202ENST00000434452 SMC6Q96SB8 1091 aa10.55□□□□□ -0.72
DSC3-202ENST00000434452 RIOK1Q9BRS2 568 aaKnown RBP10.55□□□□□ -0.72
DSC3-202ENST00000434452 CABP1Q9NZU7 370 aa10.55□□□□□ -0.72
DSC3-202ENST00000434452 NSFL1CQ9UNZ2 370 aaKnown RBP10.55□□□□□ -0.72
DSC3-202ENST00000434452 CCDC125Q86Z20 511 aa10.54□□□□□ -0.72
DSC3-202ENST00000434452 TNPO1Q92973 898 aaKnown RBP10.54□□□□□ -0.72
DSC3-202ENST00000434452 SPAG5Q96R06 1193 aa10.54□□□□□ -0.72
DSC3-202ENST00000434452 PANK2Q9BZ23 570 aa10.54□□□□□ -0.72
DSC3-202ENST00000434452 YEATS4O95619 227 aa10.54□□□□□ -0.72
DSC3-202ENST00000434452 CASTP20810 708 aaKnown RBP10.54□□□□□ -0.72
DSC3-202ENST00000434452 DDX12PQ92771 950 aa10.54□□□□□ -0.72
DSC3-202ENST00000434452 NAA15Q9BXJ9 866 aaKnown RBP10.54□□□□□ -0.72
DSC3-202ENST00000434452 SFMBT1Q9UHJ3 866 aa10.54□□□□□ -0.72
DSC3-202ENST00000434452 BCS1LQ9Y276 419 aa10.54□□□□□ -0.72
DSC3-202ENST00000434452 NFE2L2Q16236 605 aa10.54□□□□□ -0.72
DSC3-202ENST00000434452 E7EVH7 732 aa10.54□□□□□ -0.72
DSC3-202ENST00000434452 ATP5J2-PTCD1G3V325 749 aa10.54□□□□□ -0.72
DSC3-202ENST00000434452 XPAP23025 273 aaPredicted RBP10.54□□□□□ -0.72
DSC3-202ENST00000434452 HINFPQ9BQA5 517 aa10.54□□□□□ -0.72
DSC3-202ENST00000434452 C8orf76Q96K31 380 aa10.54□□□□□ -0.72
DSC3-202ENST00000434452 PALM3A6NDB9 673 aaPredicted RBP10.53□□□□□ -0.72
DSC3-202ENST00000434452 C1orf228Q6PIY5 440 aa10.53□□□□□ -0.72
DSC3-202ENST00000434452 WDR63Q8IWG1 891 aa10.53□□□□□ -0.72
DSC3-202ENST00000434452 EYA3Q99504 573 aa10.53□□□□□ -0.72
DSC3-202ENST00000434452 CCDC18Q5T9S5 1454 aa10.53□□□□□ -0.72
DSC3-202ENST00000434452 ATP2A1O14983 1001 aa10.53□□□□□ -0.72
DSC3-202ENST00000434452 BAG6P46379 1132 aa10.53□□□□□ -0.72
DSC3-202ENST00000434452 PDE3AQ14432 1141 aa10.53□□□□□ -0.72
DSC3-202ENST00000434452 SPECC1LQ69YQ0 1117 aa10.53□□□□□ -0.72
DSC3-202ENST00000434452 HEATR3Q7Z4Q2 680 aa10.53□□□□□ -0.72
DSC3-202ENST00000434452 ZNF804AQ7Z570 1209 aa10.53□□□□□ -0.72
DSC3-202ENST00000434452 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.53□□□□□ -0.72
DSC3-202ENST00000434452 IRX3P78415 501 aaPredicted RBP10.53□□□□□ -0.72
DSC3-202ENST00000434452 IFRD2Q12894 506 aaPredicted RBP10.53□□□□□ -0.72
DSC3-202ENST00000434452 FNBP4Q8N3X1 1017 aaPredicted RBP10.53□□□□□ -0.72
DSC3-202ENST00000434452 SKA2Q8WVK7 121 aaPredicted RBP10.53□□□□□ -0.72
DSC3-202ENST00000434452 EXOSC9Q06265 439 aaKnown RBP10.53□□□□□ -0.72
DSC3-202ENST00000434452 HAUS2Q9NVX0 235 aa10.53□□□□□ -0.72
DSC3-202ENST00000434452 SLC5A4Q9NY91 659 aa10.53□□□□□ -0.72
DSC3-202ENST00000434452 BIRC3Q13489 604 aa10.53□□□□□ -0.72
DSC3-202ENST00000434452 ZYXQ15942 572 aaKnown RBP10.53□□□□□ -0.72
DSC3-202ENST00000434452 LRRC27Q9C0I9 530 aa10.53□□□□□ -0.72
DSC3-202ENST00000434452 SNRKQ9NRH2 765 aa10.53□□□□□ -0.72
DSC3-202ENST00000434452 MIS18AQ9NYP9 233 aa10.53□□□□□ -0.72
DSC3-202ENST00000434452 PDE6AP16499 860 aa10.53□□□□□ -0.72
DSC3-202ENST00000434452 RAB3GAP1Q15042 981 aa10.53□□□□□ -0.72
DSC3-202ENST00000434452 PPP4R3BQ5MIZ7 849 aa10.53□□□□□ -0.72
DSC3-202ENST00000434452 HACE1Q8IYU2 909 aa10.53□□□□□ -0.72
DSC3-202ENST00000434452 NAP1L4Q99733 375 aaKnown RBP10.53□□□□□ -0.72
DSC3-202ENST00000434452 ZBED2Q9BTP6 218 aa10.53□□□□□ -0.72
DSC3-202ENST00000434452 SYNDIG1Q9H7V2 258 aa10.53□□□□□ -0.72
DSC3-202ENST00000434452 EXOC1Q9NV70 894 aa10.52□□□□□ -0.72
DSC3-202ENST00000434452 CASQ1P31415 396 aa10.52□□□□□ -0.73
DSC3-202ENST00000434452 RRP1P56182 461 aaKnown RBP10.52□□□□□ -0.73
DSC3-202ENST00000434452 CCDC155Q8N6L0 562 aa10.52□□□□□ -0.73
DSC3-202ENST00000434452 KIF9Q9HAQ2 790 aa10.52□□□□□ -0.73
DSC3-202ENST00000434452 RTCBQ9Y3I0 505 aaKnown RBP10.52□□□□□ -0.73
DSC3-202ENST00000434452 CAMK4Q16566 473 aa10.52□□□□□ -0.73
DSC3-202ENST00000434452 CEP112Q8N8E3 955 aa10.52□□□□□ -0.73
DSC3-202ENST00000434452 FAM107BQ9H098 131 aa10.52□□□□□ -0.73
DSC3-202ENST00000434452 GNAT3A8MTJ3 354 aa10.52□□□□□ -0.73
DSC3-202ENST00000434452 SSFA2P28290 1259 aa10.52□□□□□ -0.73
DSC3-202ENST00000434452 MAP9Q49MG5 647 aa10.52□□□□□ -0.73
DSC3-202ENST00000434452 TMEM67Q5HYA8 995 aa10.52□□□□□ -0.73
DSC3-202ENST00000434452 OTUD7BQ6GQQ9 843 aa10.52□□□□□ -0.73
DSC3-202ENST00000434452 SPATA17Q96L03 361 aa10.52□□□□□ -0.73
DSC3-202ENST00000434452 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.52□□□□□ -0.73
DSC3-202ENST00000434452 GOLGA6CA6NDK9 693 aa10.52□□□□□ -0.73
DSC3-202ENST00000434452 GOLGA6DP0CG33 693 aa10.52□□□□□ -0.73
DSC3-202ENST00000434452 LARGE2Q8N3Y3 721 aa10.52□□□□□ -0.73
DSC3-202ENST00000434452 CNNM3Q8NE01 707 aa10.52□□□□□ -0.73
DSC3-202ENST00000434452 RBM46Q8TBY0 533 aaKnown RBP10.52□□□□□ -0.73
DSC3-202ENST00000434452 GOLGA6AQ9NYA3 693 aa10.52□□□□□ -0.73
DSC3-202ENST00000434452 TMTC4Q5T4D3 741 aa10.51□□□□□ -0.73
DSC3-202ENST00000434452 SPDYE1Q8NFV5 336 aaPredicted RBP10.51□□□□□ -0.73
DSC3-202ENST00000434452 PSMD6Q15008 389 aa10.51□□□□□ -0.73
DSC3-202ENST00000434452 FERMT3Q86UX7 667 aa10.51□□□□□ -0.73
DSC3-202ENST00000434452 CD2APQ9Y5K6 639 aa10.51□□□□□ -0.73
DSC3-202ENST00000434452 CHRNA2Q15822 529 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms