RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 CSF1RP07333 972 aa28.94■■■□□ 2.22
SMARCAL1-208ENST00000434435 TTLL11Q8NHH1 800 aa28.94■■■□□ 2.22
SMARCAL1-208ENST00000434435 C10orf71Q711Q0 1435 aa28.94■■■□□ 2.22
SMARCAL1-208ENST00000434435 TAF1P21675 1872 aa28.93■■■□□ 2.22
SMARCAL1-208ENST00000434435 PNMA6EA0A0J9YXQ4 647 aa28.93■■■□□ 2.22
SMARCAL1-208ENST00000434435 CCDC152Q4G0S7 254 aa28.93■■■□□ 2.22
SMARCAL1-208ENST00000434435 SIRT2Q8IXJ6 389 aa28.93■■■□□ 2.22
SMARCAL1-208ENST00000434435 DLEC1Q9Y238 1755 aa28.93■■■□□ 2.22
SMARCAL1-208ENST00000434435 RTL9Q8NET4 1388 aa28.92■■■□□ 2.22
SMARCAL1-208ENST00000434435 CACNA1SQ13698 1873 aa28.92■■■□□ 2.22
SMARCAL1-208ENST00000434435 SF3B3Q15393 1217 aaKnown RBP28.92■■■□□ 2.22
SMARCAL1-208ENST00000434435 BRIP1Q9BX63 1249 aa28.92■■■□□ 2.22
SMARCAL1-208ENST00000434435 FAM161AQ3B820 660 aa28.91■■■□□ 2.22
SMARCAL1-208ENST00000434435 SSH3Q8TE77 659 aa28.91■■■□□ 2.22
SMARCAL1-208ENST00000434435 CCDC136Q96JN2 1154 aa28.91■■■□□ 2.22
SMARCAL1-208ENST00000434435 HDAC1Q13547 482 aaPredicted RBP28.9■■■□□ 2.22
SMARCAL1-208ENST00000434435 POLA2Q14181 598 aa28.9■■■□□ 2.22
SMARCAL1-208ENST00000434435 C3orf67Q6ZVT6 689 aa28.9■■■□□ 2.22
SMARCAL1-208ENST00000434435 CCDC85AQ96PX6 553 aaPredicted RBP28.9■■■□□ 2.22
SMARCAL1-208ENST00000434435 RWDD1Q9H446 243 aaPredicted RBP28.9■■■□□ 2.22
SMARCAL1-208ENST00000434435 PDE6BP35913 854 aa28.89■■■□□ 2.22
SMARCAL1-208ENST00000434435 CCDC57Q2TAC2 916 aa28.89■■■□□ 2.22
SMARCAL1-208ENST00000434435 SGIP1Q9BQI5 828 aa28.89■■■□□ 2.22
SMARCAL1-208ENST00000434435 GREM2Q9H772 168 aa28.89■■■□□ 2.22
SMARCAL1-208ENST00000434435 SPON1Q9HCB6 807 aa28.89■■■□□ 2.22
SMARCAL1-208ENST00000434435 IFIT5Q13325 482 aaKnown RBP28.88■■■□□ 2.21
SMARCAL1-208ENST00000434435 LRP5O75197 1615 aa28.87■■■□□ 2.21
SMARCAL1-208ENST00000434435 ANKRD18BA2A2Z9 1011 aa28.87■■■□□ 2.21
SMARCAL1-208ENST00000434435 PTGER2P43116 358 aa28.87■■■□□ 2.21
SMARCAL1-208ENST00000434435 ITGA6P23229 1130 aa28.86■■■□□ 2.21
SMARCAL1-208ENST00000434435 CRY2Q49AN0 593 aa28.86■■■□□ 2.21
SMARCAL1-208ENST00000434435 KIAA1551Q9HCM1 1747 aa28.86■■■□□ 2.21
SMARCAL1-208ENST00000434435 KLRG2A4D1S0 409 aaPredicted RBP28.85■■■□□ 2.21
SMARCAL1-208ENST00000434435 RFX5P48382 616 aaPredicted RBP28.85■■■□□ 2.21
SMARCAL1-208ENST00000434435 TAF7LQ5H9L4 462 aa28.85■■■□□ 2.21
SMARCAL1-208ENST00000434435 B4GALNT3Q6L9W6 998 aa28.85■■■□□ 2.21
SMARCAL1-208ENST00000434435 RPGRQ92834 1020 aaKnown RBP28.85■■■□□ 2.21
SMARCAL1-208ENST00000434435 DDX46Q7L014 1031 aaKnown RBP28.84■■■□□ 2.21
SMARCAL1-208ENST00000434435 PDZRN3Q9UPQ7 1066 aa28.84■■■□□ 2.21
SMARCAL1-208ENST00000434435 A0A1B0GUL6 1792 aa28.83■■■□□ 2.21
SMARCAL1-208ENST00000434435 IGHDP01880 384 aa28.83■■■□□ 2.21
SMARCAL1-208ENST00000434435 CDC5LQ99459 802 aaKnown RBP28.83■■■□□ 2.21
SMARCAL1-208ENST00000434435 PTPN12Q05209 780 aaKnown RBP28.82■■■□□ 2.2
SMARCAL1-208ENST00000434435 COPRSQ9NQ92 184 aa28.82■■■□□ 2.2
SMARCAL1-208ENST00000434435 SEC31BQ9NQW1 1179 aa28.82■■■□□ 2.2
SMARCAL1-208ENST00000434435 COL4A1P02462 1669 aa28.82■■■□□ 2.2
SMARCAL1-208ENST00000434435 RBM17Q96I25 401 aaKnown RBP28.81■■■□□ 2.2
SMARCAL1-208ENST00000434435 PA2G4Q9UQ80 394 aaKnown RBP28.81■■■□□ 2.2
SMARCAL1-208ENST00000434435 C2CD5Q86YS7 1000 aa28.8■■■□□ 2.2
SMARCAL1-208ENST00000434435 KLHDC4Q8TBB5 520 aa28.8■■■□□ 2.2
SMARCAL1-208ENST00000434435 BRCA1P38398 1863 aaKnown RBP28.79■■■□□ 2.2
SMARCAL1-208ENST00000434435 H0YIN7 160 aa28.79■■■□□ 2.2
SMARCAL1-208ENST00000434435 SURF6O75683 361 aaKnown RBP28.79■■■□□ 2.2
SMARCAL1-208ENST00000434435 SRGNP10124 158 aa28.79■■■□□ 2.2
SMARCAL1-208ENST00000434435 NPR1P16066 1061 aa28.79■■■□□ 2.2
SMARCAL1-208ENST00000434435 GCC1Q96CN9 775 aa28.79■■■□□ 2.2
SMARCAL1-208ENST00000434435 ZNF594Q96JF6 807 aaPredicted RBP28.79■■■□□ 2.2
SMARCAL1-208ENST00000434435 DCTPP1Q9H773 170 aa28.79■■■□□ 2.2
SMARCAL1-208ENST00000434435 NOP58Q9Y2X3 529 aaKnown RBP28.79■■■□□ 2.2
SMARCAL1-208ENST00000434435 HOXA10P31260 410 aaPredicted RBP28.78■■■□□ 2.2
SMARCAL1-208ENST00000434435 IGHMBP2P38935 993 aaKnown RBP28.78■■■□□ 2.2
SMARCAL1-208ENST00000434435 HSP90AB4PQ58FF6 505 aa28.78■■■□□ 2.2
SMARCAL1-208ENST00000434435 CENPQQ7L2Z9 268 aaPredicted RBP28.78■■■□□ 2.2
SMARCAL1-208ENST00000434435 ANKRD18AQ8IVF6 992 aa28.78■■■□□ 2.2
SMARCAL1-208ENST00000434435 EXOC6BQ9Y2D4 811 aa28.78■■■□□ 2.2
SMARCAL1-208ENST00000434435 KDM2BQ8NHM5 1336 aa28.77■■■□□ 2.2
SMARCAL1-208ENST00000434435 GRAPQ13588 217 aa28.77■■■□□ 2.2
SMARCAL1-208ENST00000434435 GRAPLQ8TC17 118 aaPredicted RBP28.77■■■□□ 2.2
SMARCAL1-208ENST00000434435 MASTLQ96GX5 879 aa28.77■■■□□ 2.2
SMARCAL1-208ENST00000434435 CRAMP1Q96RY5 1269 aa28.77■■■□□ 2.2
SMARCAL1-208ENST00000434435 SIL1Q9H173 461 aa28.77■■■□□ 2.2
SMARCAL1-208ENST00000434435 FBXO3Q9UK99 471 aa28.77■■■□□ 2.2
SMARCAL1-208ENST00000434435 G3BP1Q13283 466 aaKnown RBP eCLIP28.76■■■□□ 2.19
SMARCAL1-208ENST00000434435 OS9Q13438 667 aaPredicted RBP28.76■■■□□ 2.19
SMARCAL1-208ENST00000434435 MPHOSPH8Q99549 860 aa28.76■■■□□ 2.19
SMARCAL1-208ENST00000434435 LRRC37AA6NMS7 1700 aa28.76■■■□□ 2.19
SMARCAL1-208ENST00000434435 CIAO1O76071 339 aa28.75■■■□□ 2.19
SMARCAL1-208ENST00000434435 STYK1Q6J9G0 422 aa28.75■■■□□ 2.19
SMARCAL1-208ENST00000434435 SMC5Q8IY18 1101 aa28.75■■■□□ 2.19
SMARCAL1-208ENST00000434435 CELF1Q92879 486 aaKnown RBP28.75■■■□□ 2.19
SMARCAL1-208ENST00000434435 CD2APQ9Y5K6 639 aa28.75■■■□□ 2.19
SMARCAL1-208ENST00000434435 EYA2O00167 538 aa28.74■■■□□ 2.19
SMARCAL1-208ENST00000434435 CHRNA5P30532 468 aa28.74■■■□□ 2.19
SMARCAL1-208ENST00000434435 RPS8P62241 208 aaKnown RBP28.74■■■□□ 2.19
SMARCAL1-208ENST00000434435 LDHAL6AQ6ZMR3 332 aa28.74■■■□□ 2.19
SMARCAL1-208ENST00000434435 ERC1Q8IUD2 1116 aa28.74■■■□□ 2.19
SMARCAL1-208ENST00000434435 KLHL34Q8N239 644 aa28.74■■■□□ 2.19
SMARCAL1-208ENST00000434435 CNNM1Q9NRU3 951 aa28.74■■■□□ 2.19
SMARCAL1-208ENST00000434435 SLX4Q8IY92 1834 aa28.73■■■□□ 2.19
SMARCAL1-208ENST00000434435 RAB11FIP3O75154 756 aa28.73■■■□□ 2.19
SMARCAL1-208ENST00000434435 TGFB2P61812 414 aa28.73■■■□□ 2.19
SMARCAL1-208ENST00000434435 ZNF622Q969S3 477 aaKnown RBP eCLIP28.73■■■□□ 2.19
SMARCAL1-208ENST00000434435 PPP1R1BQ9UD71 204 aaPredicted RBP28.73■■■□□ 2.19
SMARCAL1-208ENST00000434435 ALDH1B1P30837 517 aa28.72■■■□□ 2.19
SMARCAL1-208ENST00000434435 IL15P40933 162 aaPredicted RBP28.71■■■□□ 2.19
SMARCAL1-208ENST00000434435 LRRC24Q50LG9 513 aa28.71■■■□□ 2.19
SMARCAL1-208ENST00000434435 PUS3Q9BZE2 481 aaKnown RBP28.71■■■□□ 2.19
SMARCAL1-208ENST00000434435 APBB1O00213 710 aa28.7■■■□□ 2.18
SMARCAL1-208ENST00000434435 ATG9AQ7Z3C6 839 aa28.7■■■□□ 2.18
SMARCAL1-208ENST00000434435 CNKSR1Q969H4 720 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms