RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 CHGBP05060 677 aa20.39■□□□□ 0.86
CTSD-204ENST00000433655 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.39■□□□□ 0.86
CTSD-204ENST00000433655 AEBP2Q6ZN18 517 aaPredicted RBP20.39■□□□□ 0.85
CTSD-204ENST00000433655 SYT1P21579 422 aa20.38■□□□□ 0.85
CTSD-204ENST00000433655 KCNJ4P48050 445 aa20.38■□□□□ 0.85
CTSD-204ENST00000433655 ME3Q16798 604 aa20.38■□□□□ 0.85
CTSD-204ENST00000433655 CCDC83Q8IWF9 413 aa20.38■□□□□ 0.85
CTSD-204ENST00000433655 ISCA1Q9BUE6 129 aa20.38■□□□□ 0.85
CTSD-204ENST00000433655 CHMP3Q9Y3E7 222 aa20.38■□□□□ 0.85
CTSD-204ENST00000433655 MBD3O95983 291 aa20.37■□□□□ 0.85
CTSD-204ENST00000433655 USPL1Q5W0Q7 1092 aa20.37■□□□□ 0.85
CTSD-204ENST00000433655 ZSCAN31Q96LW9 406 aaPredicted RBP20.37■□□□□ 0.85
CTSD-204ENST00000433655 SH2B1Q9NRF2 756 aaPredicted RBP20.37■□□□□ 0.85
CTSD-204ENST00000433655 TMOD3Q9NYL9 352 aa20.37■□□□□ 0.85
CTSD-204ENST00000433655 DISP2A7MBM2 1401 aa20.37■□□□□ 0.85
CTSD-204ENST00000433655 ZSCAN22P10073 491 aaPredicted RBP20.37■□□□□ 0.85
CTSD-204ENST00000433655 DNAJC2Q99543 621 aaKnown RBP20.37■□□□□ 0.85
CTSD-204ENST00000433655 TPCN1Q9ULQ1 816 aa20.37■□□□□ 0.85
CTSD-204ENST00000433655 SMC3Q9UQE7 1217 aa20.37■□□□□ 0.85
CTSD-204ENST00000433655 PLCH1Q4KWH8 1693 aa20.36■□□□□ 0.85
CTSD-204ENST00000433655 STX6O43752 255 aa20.36■□□□□ 0.85
CTSD-204ENST00000433655 TSGA10IPQ3SY00 556 aa20.36■□□□□ 0.85
CTSD-204ENST00000433655 FOXD4L6Q3SYB3 417 aaPredicted RBP20.36■□□□□ 0.85
CTSD-204ENST00000433655 FOXD4L3Q6VB84 417 aaPredicted RBP20.36■□□□□ 0.85
CTSD-204ENST00000433655 GDPD2Q9HCC8 539 aa20.36■□□□□ 0.85
CTSD-204ENST00000433655 GPR108Q9NPR9 543 aa20.36■□□□□ 0.85
CTSD-204ENST00000433655 ASAP1Q9ULH1 1129 aa20.36■□□□□ 0.85
CTSD-204ENST00000433655 COL14A1Q05707 1796 aaKnown RBP20.36■□□□□ 0.85
CTSD-204ENST00000433655 DTNBO60941 627 aa20.36■□□□□ 0.85
CTSD-204ENST00000433655 NASPP49321 788 aaPredicted RBP20.36■□□□□ 0.85
CTSD-204ENST00000433655 PRIM1P49642 420 aaKnown RBP20.36■□□□□ 0.85
CTSD-204ENST00000433655 LRRC24Q50LG9 513 aa20.36■□□□□ 0.85
CTSD-204ENST00000433655 PIGBQ92521 554 aa20.36■□□□□ 0.85
CTSD-204ENST00000433655 ZNF594Q96JF6 807 aaPredicted RBP20.36■□□□□ 0.85
CTSD-204ENST00000433655 GADD45BO75293 160 aaPredicted RBP20.35■□□□□ 0.85
CTSD-204ENST00000433655 DDX46Q7L014 1031 aaKnown RBP20.35■□□□□ 0.85
CTSD-204ENST00000433655 TMEM87AQ8NBN3 555 aa20.35■□□□□ 0.85
CTSD-204ENST00000433655 SEC62Q99442 399 aaKnown RBP20.35■□□□□ 0.85
CTSD-204ENST00000433655 RBSNQ9H1K0 784 aa20.35■□□□□ 0.85
CTSD-204ENST00000433655 WNK3Q9BYP7 1800 aa20.35■□□□□ 0.85
CTSD-204ENST00000433655 COL16A1Q07092 1604 aaPredicted RBP20.35■□□□□ 0.85
CTSD-204ENST00000433655 PALLDQ8WX93 1383 aa20.35■□□□□ 0.85
CTSD-204ENST00000433655 PSMA5P28066 241 aa20.34■□□□□ 0.85
CTSD-204ENST00000433655 GJB2P29033 226 aa20.34■□□□□ 0.85
CTSD-204ENST00000433655 RNF20Q5VTR2 975 aa20.34■□□□□ 0.85
CTSD-204ENST00000433655 CCDC129Q6ZRS4 1044 aa20.34■□□□□ 0.85
CTSD-204ENST00000433655 DNAJC10Q8IXB1 793 aa20.34■□□□□ 0.85
CTSD-204ENST00000433655 HMG20BQ9P0W2 317 aa20.34■□□□□ 0.85
CTSD-204ENST00000433655 EYA2O00167 538 aa20.34■□□□□ 0.85
CTSD-204ENST00000433655 RPS6KB1P23443 525 aa20.34■□□□□ 0.85
CTSD-204ENST00000433655 IL15P40933 162 aaPredicted RBP20.34■□□□□ 0.85
CTSD-204ENST00000433655 TCIRG1Q13488 830 aa20.34■□□□□ 0.85
CTSD-204ENST00000433655 USP48Q86UV5 1035 aa20.34■□□□□ 0.85
CTSD-204ENST00000433655 NECAB1Q8N987 351 aa20.34■□□□□ 0.85
CTSD-204ENST00000433655 ALDH8A1Q9H2A2 487 aaPredicted RBP20.34■□□□□ 0.85
CTSD-204ENST00000433655 ATG3Q9NT62 314 aa20.34■□□□□ 0.85
CTSD-204ENST00000433655 BTG4Q9NY30 223 aa20.34■□□□□ 0.85
CTSD-204ENST00000433655 SPEF2Q9C093 1822 aa20.34■□□□□ 0.85
CTSD-204ENST00000433655 LRP6O75581 1613 aa20.33■□□□□ 0.85
CTSD-204ENST00000433655 LAMA4Q16363 1823 aa20.33■□□□□ 0.85
CTSD-204ENST00000433655 F13A1P00488 732 aa20.33■□□□□ 0.85
CTSD-204ENST00000433655 TIMM10P62072 90 aa20.33■□□□□ 0.85
CTSD-204ENST00000433655 TOB2Q14106 344 aaPredicted RBP20.33■□□□□ 0.85
CTSD-204ENST00000433655 KBTBD3Q8NAB2 608 aa20.33■□□□□ 0.85
CTSD-204ENST00000433655 TCEANC2Q96MN5 208 aa20.33■□□□□ 0.85
CTSD-204ENST00000433655 CIAO1O76071 339 aa20.32■□□□□ 0.84
CTSD-204ENST00000433655 BLOC1S2Q6QNY1 142 aa20.32■□□□□ 0.84
CTSD-204ENST00000433655 LRSAM1Q6UWE0 723 aa20.32■□□□□ 0.84
CTSD-204ENST00000433655 VSIG10Q8N0Z9 540 aa20.32■□□□□ 0.84
CTSD-204ENST00000433655 PPP1R9BQ96SB3 815 aa20.32■□□□□ 0.84
CTSD-204ENST00000433655 PUS3Q9BZE2 481 aaKnown RBP20.32■□□□□ 0.84
CTSD-204ENST00000433655 MTMR6Q9Y217 621 aa20.32■□□□□ 0.84
CTSD-204ENST00000433655 CNPY2Q9Y2B0 182 aa20.32■□□□□ 0.84
CTSD-204ENST00000433655 CCDC9Q9Y3X0 531 aaKnown RBP20.32■□□□□ 0.84
CTSD-204ENST00000433655 SH3TC1Q8TE82 1336 aa20.32■□□□□ 0.84
CTSD-204ENST00000433655 ANKRD36CQ5JPF3 1778 aa20.32■□□□□ 0.84
CTSD-204ENST00000433655 SYCE3A1L190 88 aa20.32■□□□□ 0.84
CTSD-204ENST00000433655 TRIM28Q13263 835 aaKnown RBP20.31■□□□□ 0.84
CTSD-204ENST00000433655 MCMDC2Q4G0Z9 681 aa20.31■□□□□ 0.84
CTSD-204ENST00000433655 NEUROD6Q96NK8 337 aa20.31■□□□□ 0.84
CTSD-204ENST00000433655 COL22A1Q8NFW1 1626 aaPredicted RBP20.31■□□□□ 0.84
CTSD-204ENST00000433655 CCDC173Q0VFZ6 552 aa20.3■□□□□ 0.84
CTSD-204ENST00000433655 SLFNL1Q499Z3 407 aa20.3■□□□□ 0.84
CTSD-204ENST00000433655 PAG1Q9NWQ8 432 aa20.3■□□□□ 0.84
CTSD-204ENST00000433655 BCL9O00512 1426 aa20.3■□□□□ 0.84
CTSD-204ENST00000433655 ROBO1Q9Y6N7 1651 aa20.29■□□□□ 0.84
CTSD-204ENST00000433655 A0A1B0GUL7 405 aa20.29■□□□□ 0.84
CTSD-204ENST00000433655 GOLIM4O00461 696 aa20.29■□□□□ 0.84
CTSD-204ENST00000433655 SLC4A9Q96Q91 983 aa20.29■□□□□ 0.84
CTSD-204ENST00000433655 TEX13AQ9BXU3 409 aaPredicted RBP20.29■□□□□ 0.84
CTSD-204ENST00000433655 ZNF330Q9Y3S2 320 aaPredicted RBP20.29■□□□□ 0.84
CTSD-204ENST00000433655 U3KPZ7 1027 aaPredicted RBP20.29■□□□□ 0.84
CTSD-204ENST00000433655 CYP21A2P08686 494 aa20.28■□□□□ 0.84
CTSD-204ENST00000433655 PLA2G12BQ9BX93 195 aa20.28■□□□□ 0.84
CTSD-204ENST00000433655 PCCAP05165 728 aaPredicted RBP20.27■□□□□ 0.84
CTSD-204ENST00000433655 ANKRD1Q15327 319 aa20.27■□□□□ 0.84
CTSD-204ENST00000433655 KRT32Q14532 448 aa20.27■□□□□ 0.84
CTSD-204ENST00000433655 KIF6Q6ZMV9 814 aa20.27■□□□□ 0.84
CTSD-204ENST00000433655 MAP3K15Q6ZN16 1313 aa20.27■□□□□ 0.83
CTSD-204ENST00000433655 DOT1LQ8TEK3 1739 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms