RNA–Protein interactions for RNA: ENST00000433627.9

LSM14A-201, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LSM14A, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-201ENST00000433627 SYNE4Q8N205 404 aa16.46■□□□□ 0.23
LSM14A-201ENST00000433627 EXOC5O00471 708 aa16.45■□□□□ 0.22
LSM14A-201ENST00000433627 SLC27A2O14975 620 aa16.45■□□□□ 0.22
LSM14A-201ENST00000433627 BRD1O95696 1058 aa16.45■□□□□ 0.22
LSM14A-201ENST00000433627 COL9A3Q14050 684 aaPredicted RBP16.45■□□□□ 0.22
LSM14A-201ENST00000433627 GORABQ5T7V8 394 aa16.45■□□□□ 0.22
LSM14A-201ENST00000433627 KCPQ6ZWJ8 1503 aa16.45■□□□□ 0.22
LSM14A-201ENST00000433627 NECTIN1Q15223 517 aa16.45■□□□□ 0.22
LSM14A-201ENST00000433627 TCIRG1Q13488 830 aa16.45■□□□□ 0.22
LSM14A-201ENST00000433627 ATG9AQ7Z3C6 839 aa16.45■□□□□ 0.22
LSM14A-201ENST00000433627 RNF20Q5VTR2 975 aa16.44■□□□□ 0.22
LSM14A-201ENST00000433627 MAP4K1Q92918 833 aa16.44■□□□□ 0.22
LSM14A-201ENST00000433627 FAM177BA6PVY3 158 aa16.44■□□□□ 0.22
LSM14A-201ENST00000433627 EYA2O00167 538 aa16.44■□□□□ 0.22
LSM14A-201ENST00000433627 SNRKQ9NRH2 765 aa16.44■□□□□ 0.22
LSM14A-201ENST00000433627 IL15P40933 162 aaPredicted RBP16.44■□□□□ 0.22
LSM14A-201ENST00000433627 GLI3P10071 1580 aa16.43■□□□□ 0.22
LSM14A-201ENST00000433627 PRIM1P49642 420 aaKnown RBP16.43■□□□□ 0.22
LSM14A-201ENST00000433627 BLOC1S2Q6QNY1 142 aa16.43■□□□□ 0.22
LSM14A-201ENST00000433627 ACSBG1Q96GR2 724 aa16.43■□□□□ 0.22
LSM14A-201ENST00000433627 STK3Q13188 491 aa16.43■□□□□ 0.22
LSM14A-201ENST00000433627 HLFQ16534 295 aa16.43■□□□□ 0.22
LSM14A-201ENST00000433627 CEP126Q9P2H0 1117 aa16.43■□□□□ 0.22
LSM14A-201ENST00000433627 TBC1D2BQ9UPU7 963 aa16.43■□□□□ 0.22
LSM14A-201ENST00000433627 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.43■□□□□ 0.22
LSM14A-201ENST00000433627 A0A1B0GUL7 405 aa16.42■□□□□ 0.22
LSM14A-201ENST00000433627 GPT2Q8TD30 523 aa16.42■□□□□ 0.22
LSM14A-201ENST00000433627 NSFL1CQ9UNZ2 370 aaKnown RBP16.42■□□□□ 0.22
LSM14A-201ENST00000433627 WDR33Q9C0J8 1336 aaKnown RBP16.42■□□□□ 0.22
LSM14A-201ENST00000433627 LAMB4A4D0S4 1761 aa16.42■□□□□ 0.22
LSM14A-201ENST00000433627 FKBP4Q02790 459 aaKnown RBP eCLIP16.42■□□□□ 0.22
LSM14A-201ENST00000433627 IL17RAQ96F46 866 aa16.42■□□□□ 0.22
LSM14A-201ENST00000433627 ZSWIM6Q9HCJ5 1215 aa16.42■□□□□ 0.22
LSM14A-201ENST00000433627 ZBTB1Q9Y2K1 713 aa16.42■□□□□ 0.22
LSM14A-201ENST00000433627 IFIT1P09914 478 aaKnown RBP16.42■□□□□ 0.22
LSM14A-201ENST00000433627 PSMA5P28066 241 aa16.42■□□□□ 0.22
LSM14A-201ENST00000433627 VPS53Q5VIR6 699 aa16.42■□□□□ 0.22
LSM14A-201ENST00000433627 HAUS7Q99871 368 aa16.42■□□□□ 0.22
LSM14A-201ENST00000433627 TEX13AQ9BXU3 409 aaPredicted RBP16.42■□□□□ 0.22
LSM14A-201ENST00000433627 VPS37CA5D8V6 355 aaPredicted RBP16.41■□□□□ 0.22
LSM14A-201ENST00000433627 ISCA1Q9BUE6 129 aa16.41■□□□□ 0.22
LSM14A-201ENST00000433627 ABCA3Q99758 1704 aa16.41■□□□□ 0.22
LSM14A-201ENST00000433627 TAF5LO75529 589 aa16.41■□□□□ 0.22
LSM14A-201ENST00000433627 GJB2P29033 226 aa16.41■□□□□ 0.22
LSM14A-201ENST00000433627 PAG1Q9NWQ8 432 aa16.41■□□□□ 0.22
LSM14A-201ENST00000433627 PIP4K2BP78356 416 aa16.41■□□□□ 0.22
LSM14A-201ENST00000433627 ZSCAN23Q3MJ62 389 aa16.41■□□□□ 0.22
LSM14A-201ENST00000433627 FGD1P98174 961 aa16.4■□□□□ 0.22
LSM14A-201ENST00000433627 ME3Q16798 604 aa16.4■□□□□ 0.22
LSM14A-201ENST00000433627 SYT1P21579 422 aa16.4■□□□□ 0.22
LSM14A-201ENST00000433627 SLC4A9Q96Q91 983 aa16.4■□□□□ 0.22
LSM14A-201ENST00000433627 TNS2Q63HR2 1409 aa16.4■□□□□ 0.22
LSM14A-201ENST00000433627 MED23Q9ULK4 1368 aa16.4■□□□□ 0.22
LSM14A-201ENST00000433627 IFIT5Q13325 482 aaKnown RBP16.39■□□□□ 0.22
LSM14A-201ENST00000433627 TPCN1Q9ULQ1 816 aa16.39■□□□□ 0.22
LSM14A-201ENST00000433627 STX6O43752 255 aa16.39■□□□□ 0.21
LSM14A-201ENST00000433627 ADORA1P30542 326 aa16.39■□□□□ 0.21
LSM14A-201ENST00000433627 MCMDC2Q4G0Z9 681 aa16.39■□□□□ 0.21
LSM14A-201ENST00000433627 LRRC2Q9BYS8 371 aa16.39■□□□□ 0.21
LSM14A-201ENST00000433627 TM6SF1Q9BZW5 370 aa16.39■□□□□ 0.21
LSM14A-201ENST00000433627 ZNF609O15014 1411 aa16.39■□□□□ 0.21
LSM14A-201ENST00000433627 HSP90B1P14625 803 aaKnown RBP16.39■□□□□ 0.21
LSM14A-201ENST00000433627 TTC39AQ5SRH9 613 aa16.39■□□□□ 0.21
LSM14A-201ENST00000433627 KBTBD3Q8NAB2 608 aa16.39■□□□□ 0.21
LSM14A-201ENST00000433627 TRMT112Q9UI30 125 aaKnown RBP16.39■□□□□ 0.21
LSM14A-201ENST00000433627 MAP3K15Q6ZN16 1313 aa16.38■□□□□ 0.21
LSM14A-201ENST00000433627 COL15A1P39059 1388 aa16.38■□□□□ 0.21
LSM14A-201ENST00000433627 ZSCAN31Q96LW9 406 aaPredicted RBP16.38■□□□□ 0.21
LSM14A-201ENST00000433627 NAP1L2Q9ULW6 460 aaPredicted RBP16.38■□□□□ 0.21
LSM14A-201ENST00000433627 RPAP1Q9BWH6 1393 aaPredicted RBP16.38■□□□□ 0.21
LSM14A-201ENST00000433627 SYCE3A1L190 88 aa16.38■□□□□ 0.21
LSM14A-201ENST00000433627 FIBPO43427 364 aa16.38■□□□□ 0.21
LSM14A-201ENST00000433627 HSP90AB3PQ58FF7 597 aa16.38■□□□□ 0.21
LSM14A-201ENST00000433627 CNPY2Q9Y2B0 182 aa16.38■□□□□ 0.21
LSM14A-201ENST00000433627 GADD45BO75293 160 aaPredicted RBP16.37■□□□□ 0.21
LSM14A-201ENST00000433627 ZSCAN22P10073 491 aaPredicted RBP16.37■□□□□ 0.21
LSM14A-201ENST00000433627 GIGYF2Q6Y7W6 1299 aaKnown RBP16.37■□□□□ 0.21
LSM14A-201ENST00000433627 TMEM63CQ9P1W3 806 aa16.37■□□□□ 0.21
LSM14A-201ENST00000433627 SHANK3Q9BYB0 1731 aa16.37■□□□□ 0.21
LSM14A-201ENST00000433627 TOGARAM1Q9Y4F4 1720 aa16.37■□□□□ 0.21
LSM14A-201ENST00000433627 PCCAP05165 728 aaPredicted RBP16.37■□□□□ 0.21
LSM14A-201ENST00000433627 CYP19A1P11511 503 aaPredicted RBP16.37■□□□□ 0.21
LSM14A-201ENST00000433627 WASHC4Q2M389 1173 aa16.37■□□□□ 0.21
LSM14A-201ENST00000433627 METTL24Q5JXM2 366 aa16.37■□□□□ 0.21
LSM14A-201ENST00000433627 VSIG10Q8N0Z9 540 aa16.37■□□□□ 0.21
LSM14A-201ENST00000433627 SH2B1Q9NRF2 756 aaPredicted RBP16.37■□□□□ 0.21
LSM14A-201ENST00000433627 CNNM1Q9NRU3 951 aa16.37■□□□□ 0.21
LSM14A-201ENST00000433627 RPS6KB1P23443 525 aa16.36■□□□□ 0.21
LSM14A-201ENST00000433627 CCDC158Q5M9N0 1113 aa16.36■□□□□ 0.21
LSM14A-201ENST00000433627 USP48Q86UV5 1035 aa16.36■□□□□ 0.21
LSM14A-201ENST00000433627 FERMT3Q86UX7 667 aa16.36■□□□□ 0.21
LSM14A-201ENST00000433627 DZIP3Q86Y13 1208 aaKnown RBP16.36■□□□□ 0.21
LSM14A-201ENST00000433627 ZBTB38Q8NAP3 1195 aaPredicted RBP16.36■□□□□ 0.21
LSM14A-201ENST00000433627 NHSL1Q5SYE7 1610 aa16.36■□□□□ 0.21
LSM14A-201ENST00000433627 UBR2Q8IWV8 1755 aa16.36■□□□□ 0.21
LSM14A-201ENST00000433627 NASPP49321 788 aaPredicted RBP16.36■□□□□ 0.21
LSM14A-201ENST00000433627 DDB1Q16531 1140 aa16.36■□□□□ 0.21
LSM14A-201ENST00000433627 LDHAL6AQ6ZMR3 332 aa16.36■□□□□ 0.21
LSM14A-201ENST00000433627 GREM2Q9H772 168 aa16.36■□□□□ 0.21
LSM14A-201ENST00000433627 NLRP10Q86W26 655 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms